ID HE962479; SV 1; linear; genomic RNA; STD; VRL; 3054 BP. XX AC HE962479; XX DT 06-SEP-2012 (Rel. 114, Created) DT 06-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Cucumber mosaic virus RNA2 complete segment, genomic RNA, strain Vir XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3054 RA Jacquemond M.; RT ; RL Submitted (06-JUL-2012) to the INSDC. RL INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143 RL Montfavet Cedex, FRANCE. XX RN [2] RA Jacquemond J.M.; RT "Sequence of infectious cDNA clones of RNAs1, 2 and 3 of CMV strain Vir"; RL Unpublished. XX DR MD5; abdb0a8d990f74bd054134d51f44c3f4. XX FH Key Location/Qualifiers FH FT source 1..3054 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Capsicum sp." FT /strain="Vir" FT /mol_type="genomic RNA" FT /country="Italy:North Italy" FT /db_xref="taxon:12305" FT CDS 86..2662 FT /transl_table=1 FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:J7Q5J8" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:J7Q5J8" FT /protein_id="CCJ09631.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEEVERVRSEQREEAIAACRNYR FT PLPAVDVSESVTEDVHSLRTPDGAPSEEVSVEFVSYGAEDYLEKSDDELLVAFETMVKP FT MCVGQLWCPAFDKCLFISSIAMARALLLAPRTSSRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDDQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLMPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHNNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNVDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKYCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALILGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELKVERSISTKQRKKRDGIERRRSDKRRTPTGPYGGGEETETKVSQEEST FT GTRSQKSQREGAFKSQTIPLPTILSGRWFGIDRDAPPCERGGIVRV" FT CDS 2421..2756 FT /transl_table=1 FT /product="silencing suppressor" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:J7QXK9" FT /protein_id="CCJ09632.1" FT /translation="MELNEGAATNVELQLARMVEVKRQRRRSHKKNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTEMHHHASVVELSESEAPCFTLLVEEDHDYDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3054 BP; 767 A; 662 C; 716 G; 909 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagattct 60 tctagttctt ttcttttatc tttctatggc ttttcctgcc cccgctttct cactagccaa 120 tcttttgaat ggtagttacg gtgtcgacac tcccgaggaa gtggaacgcg tgcgatctga 180 gcaacgcgaa gaggctattg cggcctgtcg taattacagg cccttacccg ctgtggatgt 240 cagcgagagt gtcacagagg atgtacattc cctccgaact ccagacgggg ctccctctga 300 agaggtgtct gttgagtttg tctcttatgg tgctgaagat taccttgaaa aatctgatga 360 tgagctcctt gtcgcttttg agacgatggt caaacccatg tgtgtcggtc aattatggtg 420 ccctgcgttt gataaatgtt tattcatttc cagcattgct atggccagag ctttgctgtt 480 agcacctaga acatcctccc gaaccatgaa gtgttttgaa gacctagtcg cggctattta 540 cactaaatct gatttctatt atgatgatga gtgtgaagcc gacgatgatc agatagatat 600 ctcgtctcgc gatgtacccg gttactcttt cgaaccgtgg tcccgaacgt ctggatttga 660 accaccgcct atctgtgagg cgtgtgacat gatcatgtac cagtgcccgt gcttcgactt 720 caatgctttg aagaaatcgt gcgctgagag gactttcgct gacgattatg ttattgaagg 780 tttagatggt gtcgtcgaca atgcaacgct gttgtctaat ttaggtccat ttttgatgcc 840 tgtgaagtgt caatatgaga aatgtccgac acctaccgtt gcgattcctc cgagtttaaa 900 tcgtgctact gatcgtgttg atattaattt agttcaatcc atttgtgact cgactctgcc 960 cacgcataac aactacgacg actcttttca tcaagtgttt gtcgaaagcg cagattattc 1020 tattgatctg gatcatgtta gacttcgaca gtctgatctc atcgcaaaaa ttccagattc 1080 agggcatatg ataccggttt tgaataccgg gagcggtcac aagagagtag gtacgacgaa 1140 ggaggtcctt acagcaatta agaaacgtaa tgctgacgtt ccagagctag gtgattccgt 1200 taatctgtcc aggttgagta aggctgtggc tgagagattc ttcatttcat atattaatgg 1260 caactctcta gcatccagca actttgttaa tgtcgttagt aacttccacg attacatgga 1320 aaaatggaag tcctcaggtc tttcgtatga tgatcttcca gatcttcatg ctgagaattt 1380 gcagttttat gatcatatga taaaatctga cgtgaaacct gtggtgagcg acacactcaa 1440 cgtcgataga ccggttccgg ctactataac gtatcataag aaaggtataa cctcccagtt 1500 ctcaccgtta tttacagcgc tgtttgagcg cttccagaga tgccttcgag aacgcattat 1560 tcttcctgtt ggaaagattt catcccttga gatggcaggg tttgatgtca aaaacaaata 1620 ctgtctcgag attgacttgt cgaaatttga caagtctcag ggtgaattcc atttgatgat 1680 tcaggaacac attttgaatg gtctagggtg cccagctccg ataactaagt ggtggtgtga 1740 ttttcaccga ttctcttata ttagagaccg tagagctggt gtcggtatgc ctatcagttt 1800 tcagagacga actggtgatg cattcactta tttcggtaac accatagtca ccatggctga 1860 atttgcctgg tgttacgaca ccgaccaatt tgaaaagctg ttattctcag gcgatgattc 1920 tctaggattc tcagtacttc cccctgttgg cgatccgagt aaattcacga ctctattcaa 1980 catggaagct aaggtgatgg agcctgcagt accatatatt tgttcgaagt tcttactctc 2040 tgacgagttc ggtaatactt tttccgttcc agatcccttg cgcgagattc agcggttagg 2100 aacaaagaag atcccctatt ccgacaatga tgaattcctg tttgctcatt tcatgagctt 2160 tgttgatcgt ttgaagtttt tagacagaat gactcaatca tgtatcgatc aactttcact 2220 ctttttcgag ttgaaataca ggaaatcagg ggctgaggct gctttaattt taggcgcctt 2280 taagaaatat accgctaatt tccaatctta taaagaactc tactattcag atcgtcgtca 2340 gtgcgaattg atcaattcgt ttagttgtgt agagttgaag gttgagcgtt cgatttccac 2400 taaacagcga aagaagagag atggaattga acgaaggcgc agcgacaaac gtcgaactcc 2460 aactggcccg tatggtggag gtgaagagac agagacgaag gtctcacaag aagaatcgac 2520 gggaacgagg tcacaaaagt cccagcgaga gggcgcgttc aaatctcaga ctattccgct 2580 tcctaccatt ttatcaggta gatggttcgg aattgacaga gatgcaccac catgcgagcg 2640 tggtggaatt gtccgagtct gaggcccctt gttttacgtt actagtggaa gaagaccatg 2700 attatgacga tacagattgg ttcgctggta acgaatgggc ggaaggtgcg ttttgaatct 2760 ccccttcctt ttctccctcc agttttctga ggcgggagct gagttggcag tatggctaca 2820 aactgtctga agtcactaaa cgttttgcgg tgaacgggtt gtccatccag cttacggcta 2880 aaatggtcag tcgtggagag atccacgcca gtagacttac aagtctctga ggtgcctttg 2940 aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacttctag cacaagatgc 3000 tggttttagg gtacgggcac cccccattta atggggttct ccataaggag acca 3054 //