ID HE862273; SV 1; circular; genomic DNA; STD; VRL; 2788 BP. XX AC HE862273; XX DT 07-JAN-2013 (Rel. 115, Created) DT 03-JAN-2016 (Rel. 127, Last updated, Version 3) XX DE Okra leaf curl Oman virus, complete genome, isolate OK-2 XX KW complete genome. XX OS Okra leaf curl Oman virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2788 RA Akhtar S.; RT ; RL Submitted (18-JUN-2012) to the INSDC. RL Akhtar S., College of Agricultural and Marine Sciences, Sultan Qaboos RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, RL OMAN. XX RN [2] RA Khan A.J., Akhtar S.; RT "Diversity of begomoviruses on food crops in Oman"; RL Unpublished. XX DR MD5; 392772a4c82317bf4d836cdb97e3b570. XX FH Key Location/Qualifiers FH FT source 1..2788 FT /organism="Okra leaf curl Oman virus" FT /host="Abelmoschus esculentus" FT /isolate="OK-2" FT /mol_type="genomic DNA" FT /country="Oman:Barka" FT /isolation_source="host leaf" FT /collected_by="Adil Alshihi" FT /collection_date="2012" FT /clone="133/3V" FT /db_xref="taxon:1241370" FT CDS 166..534 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:A0A0U5C230" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A0U5C230" FT /protein_id="CCI73896.1" FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRESYDPCTLGYDLLSDL FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQPRVILCTCPHCPRHKQASGLEQQAPI FT QKTEDLSNLSQPRCPKGM" FT CDS 326..1102 FT /gene="V1" FT /gene_synonym="CP" FT /product="coat protein" FT /db_xref="GOA:A0A0U5CAG3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CAG3" FT /protein_id="CCI73897.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW FT NNRPLYRKPRIYRIYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGVGLTH FT RTGKRFTIKSIYILGKVWMDDNIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFHMFDN FT EPSTATVKNDLRDRFQVMRKFSATVTGGPSGMKEQVPVRRFFKLNSQTVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1099..1500) FT /gene="C3" FT /gene_synonym="REn" FT /product="replication enhancement protein" FT /db_xref="GOA:A0A0U5CDK8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CDK8" FT /protein_id="CCI73898.1" FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIPLTHGNQTMV FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT CDS complement(1244..1648) FT /gene="C2" FT /gene_synonym="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:A0A0U5CHQ6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0A0U5CHQ6" FT /protein_id="CCI73899.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQP FT QEGIGDSQMFHELQGLDDLTPSDWSFLKRI" FT CDS complement(1548..2636) FT /gene="C1" FT /gene_synonym="Rep" FT /product="replication initiation protein" FT /db_xref="GOA:A0A0X1KUN1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUN1" FT /protein_id="CCI73900.1" FT /translation="MAAPNRFRINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGVFQVDGRSARGGCQSANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH FT NLNCNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWAAENVVDAAARPSRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFITLSNPL FT YSGTNQSSASGGQEESNQETQD" FT CDS complement(2186..2479) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUN3" FT /protein_id="CCI73901.1" FT /translation="MGLLTCMFSSNSKGSSSARTIDSSTSPPQPGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2788 BP; 690 A; 598 C; 636 G; 864 T; 0 other; accggatggc cgcgcgattt tttttgtggt ccccgcccca cgtgaacacg tcgcgcgagt 60 tctgaagatg tcgcgcgatg ctgtccaatc agaacgcgcg ctctacgcat tataatttga 120 aatttgaaat ataaacttgc tcccctaagt ttgtccggca taactatgtg ggatccgtta 180 ttgaacgact tccctgaatc cgttcacggt ttccgttgta tgctcgccgt gaaatatttg 240 caggctgttc gagagtcgta cgatccttgc actcttgggt acgatcttct tagcgatctt 300 atcggagttg ttcgccgtac caactatgtc gaagcgacca gcagatatca tcatttccac 360 tcccgcctcg aaagtgcgtc gccgtctgaa cttcgacagc cccgggttat cctctgcacg 420 tgcccccact gtcctcgtca caaacaagcg tcgggcctgg aacaacaggc ccctatacag 480 aaaaccgagg atttatcgaa tttatcgcag cccagatgtc ccaaagggat gtgaaggtcc 540 ttgtaaggtc cagtcttatg aacagcgtga tgatgtcaag catacgggca ttgttcgatg 600 tgtgtcggat gttactaagg gtgttggtct tactcatcgt actggaaagc gtttcactat 660 caaatctatc tatattcttg gtaaggtatg gatggatgac aacattaaga agcagaatca 720 caccaacaat gtaatgtttt tccttgtccg tgatagaaga ccctatggca atagtcccat 780 ggattttgga caggtttttc acatgtttga caacgaacct agcactgcca ctgtaaagaa 840 tgatttgcga gatcgttttc aggtgatgcg taagtttagt gctactgtaa ctggtggccc 900 ttctgggatg aaggaacaag ttcctgttcg taggtttttt aagcttaata gtcagactgt 960 gtataaccat caagaagctg cgaagtatga gaatcatact gagaatgctt tgttgttgta 1020 tatggcatgt actcatgcct caaaccctgt gtatgctacg ttaaagatac ggatctattt 1080 ctacgattcg gtatctaatt aatataattt tatttgaata ttgtgcgtga attcacttgc 1140 cacggttgtt tgcaatacat cgtacaaaac atgattgact gccctaatta cattgttaat 1200 tgaaattacg cctattctat acaaatattt cataatctgc ttcctaaata cgtttaagaa 1260 aagaccagtc ggagggcgtg agatcgtcca gaccctgaag ttcatgaaac atttgtgaat 1320 ccccaattcc ttcctgaggt tgtagttgaa tcttatctgc atctctacca ttgtttgatt 1380 cccgtgcgtt agaggaatct cctttatggt tttgaaatac aggggattgt tgattgtcca 1440 gataagtacg ccattctctg tctgatgcgc agtgatgagt tcccctgtgc gtgaatccat 1500 tgtctctgca cgtgaaggct acgtatactg tgcaaccaca agggatgtca atcctgcgtc 1560 tcctgattgc tctcttcttg gcctcccgat gctgaacttt gattggtacc tgagtacagc 1620 ggatttgaga gggtgatgaa ggtcgcattc tttaatgccc aggattttaa tgctgagttc 1680 ttgtcctcgt ctaagaactc tttatagctt gcattgggcc ctggattgca gaggaagatt 1740 gttgggatgc cccctttaat ttgaactggt ttcccgtatt ttgtgttgga ttgccagtcc 1800 ctttgggccc ccatgaactc tttaaagtgc ttgaggaagt gcggatcgac gtcatcaatg 1860 atgttatacc aagcgtcgtt actgtacacc tttggactta gatctaaatg cccacataga 1920 taattatgtg ggcctagtga cctagcccat acggtctttc ctgttctgct ttccccttca 1980 atcactatac taatcggtct acttggccgc gcagcggcat cgacgacgtt ctcggccgcc 2040 cactcttcaa gttcttctgg aacttgatcg aacgaagaag aagaaaaagg agaaacataa 2100 ggagctggtg gctcctgaaa atacctatct aaattacaat ttaaattatg aaattggagt 2160 agaaagtctc ttggggcttt ctccttcagt atattgaggg cctgagcttt ggaccctgcg 2220 ttgattgcct cggcatatgc gtcgttggca gattggcaac ctcctctagc tgatcttcca 2280 tcgacctgga aaactccatg atcaaggatg tctccgtctt tctccatgta ggttttgaca 2340 tcgcttgagc ttttagctcc ctgaatgttc ggatggaaat gtgctgacct ggttggggag 2400 gtgaggtcga agaatctatt gttcttgcac tggaacttcc cttcgaattg gatgagaaca 2460 tgcaagtgag gagtcccatc ttcgtgaagc tctctgcaga ttctaatgaa ttttttggaa 2520 gtgggtgttt ggagatttaa taattgggaa agtgcttcct ctttagtaag agagcacttg 2580 ggataagtga gaaaataatt tttggcattt attctaaacc gattgggggc tgccatgctg 2640 acttagtcaa tcggtgtctc tcaatttgct ctatgtattg gtgtactgga gtcctatata 2700 tatggagact ctaatggcat aattgtaata aaagaacttt aatttgaatt tcaaatgaaa 2760 agcctaaagc ggccatccgt ctaatatt 2788 //