ID HE819239; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC HE819239; XX DT 07-JAN-2013 (Rel. 115, Created) DT 03-JAN-2016 (Rel. 127, Last updated, Version 2) XX DE Tomato leaf curl Oman virus complete genome, isolate KB-18 XX KW complete genome. XX OS Tomato leaf curl Oman virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RA Akhtar S.; RT ; RL Submitted (19-MAY-2012) to the INSDC. RL Akhtar S., Sultan Qaboos University, College of Agricultural and Marine RL Sciences, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, OMAN. XX RN [2] RX DOI; 10.1007/s00705-013-1853-x. RX PUBMED; 24052149. RA Khan A.J., Akhtar S., Singh A.K., Al-Shehi A.A., Al-Matrushi A.M., RA Ammara U., Briddon R.W.; RT "Recent evolution of a novel begomovirus causing tomato leaf curl disease RT in the Al-Batinah region of Oman"; RL Arch. Virol. 159(3):445-455(2014). XX DR MD5; 675827bebf9eaa7533336e7b4b724961. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Tomato leaf curl Oman virus" FT /host="Capsicum sp." FT /isolate="KB-18" FT /mol_type="genomic DNA" FT /country="Oman:Al-Khaburah" FT /isolation_source="leaf" FT /collection_date="2011" FT /clone="P-17" FT /db_xref="taxon:713949" FT CDS 149..499 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:A0A0X1KUD9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUD9" FT /protein_id="CCH75812.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQAPIMDVQAHV FT PKAQNIQNVSKP" FT CDS 309..1085 FT /gene="V1" FT /gene_synonym="CP" FT /product="coat protein" FT /db_xref="GOA:A0A0X1KUD7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUD7" FT /protein_id="CCH75813.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1082..1486) FT /gene="C3" FT /gene_synonym="REn" FT /product="replication enhancement protein" FT /db_xref="GOA:A0A0X1KUI9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUI9" FT /protein_id="CCH75814.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCYLNFRIWTTLRPQTGRFLRVFRYQVLKYLDNLGVISINN FT VIRAVDHVLYDVLENTINVTESHDIKYKFY" FT CDS complement(1227..1634) FT /gene="C2" FT /gene_synonym="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:A0A0X1KUG7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUG7" FT /protein_id="CCH75815.1" FT /translation="MQPSSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRREAISNEPRHHFNTDKIQSQ FT HQEGTGDSQMLSQLPNLDDLTASDWSFLKSI" FT CDS complement(1558..2622) FT /gene="C1" FT /gene_synonym="Rep" FT /product="replication initiation protein" FT /db_xref="GOA:A0A0X1KUN0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUN0" FT /protein_id="CCH75816.1" FT /translation="MPRINSFCVNAKNIFLTYPKCQIPKEQMLEILQSINCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPNNSSQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSAEEALSIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVNPHYLKHFKELMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWPLKNATFVTLYEPL FT FSSANQNPTPHSED" FT CDS complement(2208..2465) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E1U825" FT /protein_id="CCH75817.1" FT /translation="MGLCISTPSSSSKVKPSSETPDISMSLTLITPPNSTQTSREQSPA FT PMSSPTSRRTVITSTGVSFRSMEDLLEEVNRQLMMQQQRP" XX SQ Sequence 2764 BP; 749 A; 539 C; 625 G; 851 T; 0 other; accggatggc cgcgcgattt ttttgtggtc cccgccacac gtgggttcca cagacgtcac 60 tgtcaaccaa tcaaattgca tcctcaaacg ttagataagt gtacatttgt ctttatatac 120 ttggtcccca agtttgttgt cttgcaatat gtgggatcca cttcttaatg aatttcctga 180 atccgttcac ggatttcgtt gtatgttagc tattaaatat ttgcaggccg ttgaggaaac 240 gtatgagccc aacactttgg gccacgattt aattagggat cttatatctg ttgtaagggc 300 tcgtgactat gtcgaagcga cccggcgata taatcatttc cacgcccgtc tcgaaggttc 360 gccgaaggct gaacttcgac agcccctaca gcagccgtgc tgctgccccc attgtccaag 420 gcataaacaa gcgccgatca tggacgtaca ggcccatgta ccgaaagccc agaatataca 480 gaatgtatcg aagccctgat gttccccgtg gatgtgaagg cccatgtaaa gtccagtctt 540 atgagcaacg ggatgatatt aagcatactg gtattgttcg ttgtgttagt gatgttactc 600 gtggatccgg aattacccac agagtgggta agaggttctg tgttaaatcc atatattttt 660 taggtaaagt ctggatggat gaaaatatca agaagcagaa tcacactaat caggtcatgt 720 tcttcttggt ccgtgataga aggccctatg gaagcagccc aatggatttt gggcaggttt 780 ttaatatgtt cgataatgag cctagtaccg caaccgtgaa gaatgatctc cgggataggt 840 ttcaagtgat gaggaaattt catgctacag ttatcggtgg gccctctgga atgaaggaac 900 aggcattagt taagagattt tttagaatta acagtcatgt aacttataat catcaggagg 960 cagccaagta tgagaatcat actgagaatg ctttgttgtt gtatatggca tgtactcatg 1020 cctctaatcc agtgtatgca actatgaaaa tacgcatcta tttctatgat tcaatatcaa 1080 attaataaaa tttatatttt atatcatgac tttcggttac atttattgtg ttttcaagta 1140 catcatataa tacatgatca actgctctga ttacattgtt aatggaaatt acaccaagat 1200 tatctaaata cttaagaact tgatatctaa atactcttaa gaaacgacca gtctgaggcc 1260 gtaaggtcgt ccaaattcgg aagttgagat aacatttgtg aatccccagt accttcctga 1320 tgttgtgatt gaatcttatc tgtattgaaa tgatgtcgtg gctcattaga aatggcctct 1380 cgtcgtggtt ggtgatcttg aaatacaggg gattttctat ctcccatata aaaacgccat 1440 tctgggcttg atgagcagtg atgagttccc cggtgcgtga atccatgatt gatgcagttg 1500 atgtggaggt aatatgagca tccgcagtcg aggtctatgc gcttacgtct gactggctta 1560 gtcttcgcta tgcggtgttg gattttgatt ggcacttgag aacagtggct cgtagagggt 1620 gacgaaggtt gcattcttga gaggccaatt ttttaaggat atgttttttt cttcgtctag 1680 atattcccta tatgaggagg taggtcctgg attgcagagg aagatagtgg gaattccccc 1740 tttaatttga atgggcttcc cgtactttgt gttgctttgc cagtccctct gggcccccat 1800 caattctttg aagtgcttta aataatgcgg gtttacgtca tcaatgacgt tgtaccacgc 1860 atcattactg tacacctttg gacttaggtc tagatgtcca cataaataat tatgtgggcc 1920 tagagacctg gcccacattg ttttgcctgt tctgctatca ccctcgatga caatactatt 1980 aggtctccat ggccgcgcag cggaagacat gacgttctct gacacccata cttcaagttc 2040 ctctggaact tgattaaaag aagaagacaa aaagggagaa acataaacct ccacaggagg 2100 tgtaaaaatc ctatctaaat tacattttaa attatgatat tgaaaaataa aatcttttgg 2160 gagtttttcc cttattattg ataaagcctc ttcagccgaa cctgcattta gggcctctgc 2220 tgctgcatca ttagctgtct gttgacctcc tcgagcagat cttccatcga tctgaaactg 2280 accccagtcg atgtaatcac cgtccttctc gatgtaggac ttgacatcgg agctggactt 2340 tgctccctgg aagtttgggt ggaattggga ggagttatta gggtgagtga catcgaaatg 2400 tctggggttt ctgaacttgg ctttaccttt gaactggatg agggcgtgga tatgcagaga 2460 cccatcttgg tgtttttctt gtgacactct gataaataat ttatcagatg ggcaatttat 2520 tgactgaaga atttcgagca tttgctcttt gggtatttgg cattttggat aagtgaggaa 2580 aatatttttg gcatttacac aaaaagagtt aatacgaggc atattgaatt ggggacactc 2640 aaaactctga ggaatggggg actctgggga cgcatttata tgaagtcccc aaatggcatt 2700 ttcgtaatta cgaaagaaat ttcaaaatac taacgctcca aaaagcggcc atccgtataa 2760 tatt 2764 //