ID HE818457; SV 1; linear; genomic RNA; STD; VRL; 6394 BP. XX AC HE818457; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Yongren-1, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6394 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J., Wang F., Shen L., Qian Y.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; c978dff8ed5599567df2dad96a257de0. XX FH Key Location/Qualifiers FH FT source 1..6394 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Yongren-1" FT /mol_type="genomic RNA" FT /country="China:Yunnan Province" FT /db_xref="taxon:12242" FT CDS 69..3419 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HB22" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HB22" FT /protein_id="CCH64141.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRACVHCCMPNLDVRDIMRHEGQKDSIELYLSRLEREGKTVPNFQ FT KEAFDRYAEIPEDAVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT FTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLISKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALQDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLKNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYINRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLHGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4902..5708 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HB23" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HB23" FT /protein_id="CCH64142.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKISSGDRSVPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5711..6190 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:I2HB00" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:I2HB00" FT /protein_id="CCH64143.1" FT /translation="MSYSITTPSQFVYLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6394 BP; 1859 A; 1214 C; 1540 G; 1781 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 60 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctggac actgtccgag 120 gaaataactc cttggtcaat gatctagcaa agcgtcgtct ttacgacaca gcggtcgaag 180 agtttaacgc tcgtgaccgc aggcccaaag tgaacttttc aaaagtaata agcgaggagc 240 agacgcttat tgctacccgg gcatatccag aattccaaat tacattttac aacacgcaaa 300 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 360 aaattcccta cggatcattg acttatgaca taggcgggaa ttttgcatcg catctgttca 420 agggacgagc atgcgtacac tgctgcatgc ccaacctgga cgttcgagac atcatgcggc 480 atgaaggcca gaaagacagt attgaactat acctttctag gctagagaga gaggggaaaa 540 cagtccctaa cttccaaaag gaagcatttg acagatacgc agaaattcct gaggacgctg 600 tctgtcataa tactttccag acatgtgaac atcagccgat gcagcaatca ggcagagtgt 660 acgccattgc gctacacagc atatatgaca tacccgctga tgagttcggg gcggcactct 720 tgaggaaaaa cgtccatacg tgctatgccg ctttccactt ctctgagaac ctgcttcttg 780 aggattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaaat 840 tgaccttttc ttttgcatca gagagtactc ttaattactg tcatagttat tctaatattc 900 ttaagtatgt gtgcaaaact tacttccctg cctctaatag agaggtttac atgaaggagt 960 ttttagtcac cagggttaac acctggtttt gtaagttttc tagaatagat acttttcttt 1020 tgtacaaagg tgtggcccat aaaagtgtag atagtgagca gttttatact gcaatggaag 1080 acgcatggca ttacaaaaag actcttgcaa tgtgcaacag tgagagaatt ctccttgagg 1140 attcatcatc agttaattac tggtttccca aaatgaggga tatggtcatc gtaccattat 1200 tcgacatttc tttggagact agtaagagga cgcgcaagga agtcttagtg tccaaggatt 1260 tcgtgtttac agtgctcaac cacattcgaa cataccaggc gaaagctctt acatacgcaa 1320 atgttctgtc cttcgtcgaa tcgattcgat cgagggtaat cattaacggt gtaacagcga 1380 ggtccgaatg ggatgtggac aaatctttgt tgcaatcctt gtccatgacg ttttacctgc 1440 atactaagct tgccgttcta aaggatgact tactgattag caagtttagt ctcggttcaa 1500 aaacggtgtg tcagcatgtg tgggatgaga tttcgctggc ttttgggaac gcatttccct 1560 ccgtaaaaga gaggctcttg aacaggaaac ttatcagagt ggcaggtgac gcattagaga 1620 tcagggtgcc tgatctatat gtgactttcc acgacagatt agtgactgag tacaaggcct 1680 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1740 atgctctttc ggagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1800 cccagatgtg ccaatctttg gaagttgacc caatgacagc agcgaaggtt atagtcgcgg 1860 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctacagag gcgaatgttg 1920 cgctagcttt gcaagatcaa gagaaggctt cagaaggtgc tttggtagtt acctcgaggg 1980 aagttgaaga accgtccatg aagggttcga tggccagagg agagttacaa ttagctggtc 2040 ttgctggaga tcatccggag tcgtcttatt ctaggaacga ggagatagag tctttagagc 2100 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2160 caggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcatcactat 2220 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2280 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttgatc aaaccaacgg 2340 ccaagagtca tgcatggggt gttgtcgaaa cccacgcgag gaagtatcat gtggcgcttt 2400 tggaatatga tgagcagggt gtggtaacat gcgatgattg gagaagagta gctgtcagct 2460 ctgagtctgt tgtttattcc gatatggcga aactcagaac tctgcgccga ctgcttaaaa 2520 acggtgaacc gcacgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2580 gaaaaaccaa agaaattctt tccagggtta attttgatga agatctaatt ctagtacctg 2640 ggaagcaagc tgcggaaatg atcagaagac gtgcgaattc ctcagggatt attgtggcca 2700 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttggtaaa agcacacgct 2760 gtcagttcaa gagattattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2820 ttcttgtggc gatgtcattg tgcgaaattg catatgttta cggagacaca cagcagattc 2880 catacatcaa tagagtttca ggattcccgt accccgccca ttttgccaaa ttggaagttg 2940 acgaggttga gacacgcaga actactctcc gttgtccagc tgatgtcaca cattatctga 3000 acaggagata tgagggcttt gtcatgagta cttcttcggt taaaaagtct gtttcgcagg 3060 agatggttgg cggagccgct gtgatcaatc cgatctcaaa acccctgcat ggcaagatct 3120 tgacgtttac ccaatcggat aaagaagctc tgctttcaag agggtattca gatgttcaca 3180 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3240 caccagtctc catcattgca ggagacagcc cacatgtttt ggttgcattg tcgaggcaca 3300 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatt attagagatc 3360 tagagaaact tagctcgtac ttgttagata tgtataaggt cgatgcagga acacaatagc 3420 aattacagat tgactcggtg ttcaaaggtt ccaatctttt tgtggcagcg ccaaagactg 3480 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggtaac agcaccatga 3540 tgaataattt tgatgctgtt accatgaggt tgactgacat ttcattgaat gtcaaagatt 3600 gcatattgga tatgtccaaa tctgttgctg cgcctaagga tcagatcaaa ccactaatac 3660 ctatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aatttagtgg 3720 cgatgattaa aaggaacttt aacgcacccg agttgtctgg catcattgat attgaaaaca 3780 ctgcatcttt agttgtagat aagtttttcg atagttattt gcttaaggaa aaaagaaaac 3840 caaataaaaa tgtttctttg tttagtagag agtctctcaa tagatggtta gaaaagcaag 3900 aacaggtaac aataggccag ctcgcagatt ttgattttgt ggatttgcca gcagttgatc 3960 agtatagaca catgatcaaa gcacaaccca agcaaaaatt ggacacttca atccaaacgg 4020 agtacccggc tttgcagacg attgtgtacc attcaaaaaa gatcaatgca atatttggcc 4080 cgttgtttag tgagcttact aggcaattac tggacagtgt tgattcgagc agatttttgt 4140 ttttcacaag aaagacacca gcgcagattg aggatttctt cggagatctc gacagtcatg 4200 tgccgatgga tgtcttggag ctggatatat caaaatacga caaatctcag aatgaattcc 4260 actgtgcagt agaatatgag atctggcgaa gattgggttt tgaagatttc ttgggagaag 4320 tttggaagca agggcataga aagaccaccc tcaaggatta taccgcaggt atcaaaactt 4380 gcatctggta tcaaagaaag agcggggacg tcacgacgtt cattggtaac actgtgatca 4440 ttgctgcatg tttggcctcg atgcttccga tggagaaaat aatcaaagga gccttttgtg 4500 gtgacgatag tctgctgtac ttcccaaagg gttgtgagtt tccggatgtg caacactccg 4560 cgaatcttat gtggaatttt gaagcaaaac tgtttaaaaa acagtatgga tacttttgcg 4620 gaaggtatgt aatacatcac gacagaggat gcattgtgta ttacgatccc ctaaagttga 4680 tctcaaaact tggtgctaaa cacatcaagg attgggaaca cttggaggag ttcagaaggt 4740 ctctttgtga tgttgctgtt tcgttgaaca ttgtgcgtat tacacacagt tggacgacgc 4800 tgtatgggag gttcataaga ccgcccctcc aggttcgttt gtttataaaa gtctggtgaa 4860 gtatttgtct gataaagttc tttttagaag tttgtttata gatggctcta gttgttaaag 4920 gaaaagtgaa tatcaatgag tttatcgacc tgacaaaaat ggagaagatc ttaccgtcga 4980 tgtttacccc tgtaaagagt gtcatgtgtt ccaaagttga taaaataatg gttcatgaga 5040 atgagtcatt gtcagaggta aaccttctta aaggagttaa gcttattgat agtggatacg 5100 tctgtttagc cggtttggtc gtcacgggcg agtggaactt gcctgacaat tgcagaggag 5160 gtgtgagcgt gtgtctggtg gacaaaagga tggaaagagc cgacgaggcc actctcggat 5220 cttactacac agcagctgca aagaaaagat ttcagttcaa ggtcgttccc aattatgcta 5280 taaccaccca ggacgcgatg aaaaacgtct ggcaagtttt agtcaatatt agaaatgtaa 5340 agatgtcagc gggtttctgt ccgctttctc tggagtttgt gtcggtgtgt atcgtttata 5400 gaaataatat aaagttaggt ttgagagaga aaattacaaa cgtgagagat ggagggccca 5460 tggaacttac agaagaagtt gttgatgagt tcatggaaga tgtccctatg tcaatcaggc 5520 ttgcaaagtt tcgatctcga accggaaaaa agagtgatgt ccgtaaaggg aaaattagta 5580 gtggtgatcg gtcagtgccg aacaagaact atagaaatgt taaggatttt ggaggaatga 5640 gttttaaaaa gaataattta atcgatgatg attcggagac tactgtcgcc gaatcggatt 5700 cgttttaaat atgtcttaca gtatcactac tccatctcag ttcgtgtact tgtcatcagc 5760 gtgggccgac ccaatagaat taattaattt atgtactaat gccttaggaa atcagttcca 5820 aacacaacaa gctcgaactg tcgttcaaag acaattcagt gaggtgtgga aaccttcacc 5880 acaagtaact gttagattcc ctgacagtga ctttaaggtg tataggtaca atgcggtatt 5940 agacccgcta gtcacagcac tgttaggtgc atttgacact agaaatagaa taatagaagt 6000 tgaaaatcag gcgaacccca cgactgccga aacgttagac gctactcgta gagtagacga 6060 cgcgacggtg gccataagga gcgctataaa taatttagta gtagaattga tcagaggaac 6120 tggatcttat aatcgtagct ctttcgagag ctcttctggt ttggtttgga cctctggtcc 6180 tgcaacttga ggtagtcaag atgcataata aataacggat tgtgtccgta atcacacgtg 6240 gtgcgtacga taacgcatag tgtttttccc tccacttaaa tcgaagggtt gtgtcttgga 6300 tcgcgcgggt caaatgtata tggttcatat acatccgcag gcacgtaata aagcgagggg 6360 ttcgaatccc cccgttaccg ccggtagggg ccca 6394 //