ID HE818454; SV 1; linear; genomic RNA; STD; VRL; 6396 BP. XX AC HE818454; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Xuyong, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6396 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; 0e3312f4f8e31f5d00f02ee148820207. XX FH Key Location/Qualifiers FH FT source 1..6396 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Xuyong" FT /mol_type="genomic RNA" FT /country="China:Sichuan Province" FT /db_xref="taxon:12242" FT CDS 69..3419 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HB13" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HB13" FT /protein_id="CCH64132.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGGKPVPNFQ FT KEAFDRYAEIPEDVVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKESLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT YTVLNHIRTCQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLISKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALQDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLRNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYNNRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLQGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4903..5709 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HB14" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HB14" FT /protein_id="CCH64133.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKVSGSDRSVPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5712..6191 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q77H57" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77H57" FT /protein_id="CCH64134.1" FT /translation="MSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6396 BP; 1859 A; 1214 C; 1548 G; 1775 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 60 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctagac actgtccgag 120 gaaataactc cttggtcaat gatctagcaa agcgtcgtct ttacgacaca gcggttgaag 180 agtttaacgc tcgtgaccgc aggcccaaag tgaacttttc aaaagtaata agcgaggagc 240 agacgcttat tgctacccgg gcatatccag aattccaaat tacattttat aacacgcaaa 300 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 360 aaattcccta cggatcattg acttatgaca taggtgggaa ttttgcatcg catctgttca 420 agggacgagc atacgtacac tgctgcatgc ccaacctgga cgttcgagac atcatgcggc 480 atgaaggcca gaaagacagt attgaactat acctttctag gctagagaga ggggggaaac 540 cagtccccaa cttccaaaag gaagcatttg acagatacgc agaaattcct gaggacgttg 600 tctgtcacaa tactttccag acatgtgaac atcagccgat gcagcaatca ggcagagtgt 660 atgccattgc gctacacagc atatatgaca tacccgctga tgagttcggg gcggcactct 720 tgaggaaaaa cgtccatacg tgttatgccg ctttccactt ctctgagaac ctgcttcttg 780 aagattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaaat 840 tgaccttttc ttttgcatca gagagtactc ttaattactg tcatagttat tctaatattc 900 ttaagtatgt gtgcaaaact tacttcccgg cctctaatag agaggtttac atgaaggagt 960 ctttagtcac cagggttaat acctggtttt gtaagttttc tagaatagat acttttcttt 1020 tgtacaaagg tgtggcccat aaaagtgtgg atagtgagca gttttatact gcaatggaag 1080 atgcatggca ttacaaaaag actcttgcaa tgtgcaacag cgagagaatt ctccttgagg 1140 attcatcatc agtcaattac tggtttccaa aaatgaggga tatggtcatc gtaccattat 1200 tcgacatttc attggagact agtaagagga cgcgcaagga agtcttagtg tccaaggatt 1260 tcgtgtatac agtgcttaac cacattcgaa catgccaggc gaaagctctt acatacgcaa 1320 atgttttgtc cttcgtcgaa tcgattcggt cgagggtgat cattaacggt gtgacagcga 1380 ggtccgaatg ggatgtggac aaatctttgc tacaatcctt gtccatgacg ttttacctgc 1440 atactaagct tgccgtttta aaggatgact tactgattag caagtttagt ctcggttcaa 1500 aaacagtgtg tcagcatgtg tgggatgaga tttcgctggc gtttgggaac gcttttccct 1560 ccgtgaaaga gaggctcttg aacagaaaac ttatcagagt ggcaggtgac gcattagaga 1620 tcagggtgcc tgatctatat gtgactttcc acgatagatt agtgactgag tacaaggcct 1680 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1740 atgcactttc ggagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1800 cccagatgtg ccaatctttg gaagttgacc caatgacagc agcgaaggtt atagtcgcgg 1860 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctactgag gcgaatgttg 1920 cgctagcttt acaggatcaa gagaaggctt cagaaggtgc tttggtagtt acctcgaggg 1980 aagttgaaga accgtccatg aagggttcaa tggccagagg agagttacaa ttagctggtc 2040 ttgctggaga tcatccggag tcgtcctatt ctaggaacga ggagatagag tctttagagc 2100 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2160 cgggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcatcactat 2220 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2280 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttgatc aaaccaacgg 2340 ccaagagtca tgcatggggt gttgtcgaaa cccacgcgag gaagtatcat gtggcgcttt 2400 tggaatatga tgagcagggt gtggtaacat gcgatgattg gagaagagta gctgtcagct 2460 ctgagtctgt tgtttattcc gacatggcga aactcagaac tctgcgcaga ctgcttcgta 2520 acggtgaacc gcatgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2580 gaaaaaccaa agaaattctt tccagggtta attttgatga agatctaatt ctagtacctg 2640 ggaagcaagc cgcggaaatg atcagaagac gtgcaaattc ctcagggatt attgtggcca 2700 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttgggaaa agcacacgct 2760 gtcagttcaa gaggttattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2820 ttcttgtggc gatgtcatta tgcgaaattg catatgttta cggagacaca cagcagattc 2880 catacaacaa tagagtttca ggattcccgt accccgccca ttttgccaaa ttggaagttg 2940 acgaggttga gacacgcaga actactctcc gttgtccagc cgatgtcaca cattatctga 3000 acaggagata tgagggcttt gtcatgagta catcttcagt taaaaagtct gtttcgcagg 3060 agatggttgg cggagccgcc gtgatcaatc cgatctcaaa acccctgcaa ggtaagatcc 3120 tgacgtttac ccaatcggat aaagaagctc tgctttcaag agggtattca gatgttcaca 3180 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3240 caccagtctc catcattgca ggagacagcc cacatgtttt ggttgcattg tcgaggcaca 3300 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatt attagagatc 3360 tagagaaact tagttcttac ttgttagata tgtataaggt tgatgcagga acacaatagc 3420 aattacaggt tgactcggtg ttcaaaggtt ccaatctttt tgtggcagcg ccaaagactg 3480 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggtaac agcaccatga 3540 tgaataattt tgatgctgtt accatggggt tgactgacat ttcattgaat gtcaaagatt 3600 gcatattgga tatgtccaag tctgttgctg cgcctaagga tcagatcaaa ccactaatac 3660 ctatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aatttagtgg 3720 cgatgattaa aaggaacttt aacgcacccg agttgtctgg catcattgat attgaaaata 3780 ctgcatcttt agttgtagac aagtttttcg atagttattt gcttaaagaa aaaagaaaac 3840 caaataaaaa tgtttctttg ttcagtagag agtctctcaa tagatggtta gaaaagcaag 3900 aacaggtaac aataggccag ctcgcagatt ttgattttgt ggatttgcca gcagttgatc 3960 agtacagaca catgatcaaa gcacaaccca agcaaaaatt ggacacttca atccaaacgg 4020 agtacccggc tttgcagacg attgtgtacc attcaaaaaa gatcaatgca atatttggcc 4080 cgttatttag tgagcttact aggcaattac tggacagtgt tgattcgagc agatttttgt 4140 ttttcacaag aaagacacct gcgcagattg aggatttctt cggagatctc gacagtcatg 4200 tgccgatgga tgtcttggag ctggacatat caaaatacga caaatctcag aatgaattcc 4260 actgtgcagt agaatatgag atctggcgaa gattgggttt tgaagatttc ttgggagaag 4320 tttggaagca agggcataga aagaccaccc tcaaggatta taccgcaggt ataaaaactt 4380 gcatctggta tcaaagaaag agcggggacg tcacgacgtt cattggaaac actgtgatca 4440 ttgctgcatg tttggcttcg atgcttccga tggagaaaat aatcaaagga gccttttgtg 4500 gtgacgatag tctgctgtac ttcccaaagg gttgtgagtt tccggatgtg caacactccg 4560 cgaatcttat gtggaatttt gaagcaaaac tgtttaaaaa acagtacgga tacttttgcg 4620 gaaggtatgt aatacatcac gacagaggat gcattgtgta ttacgatccc ctaaagttga 4680 tctcgaaact tggtgctaaa cacatcaagg attgggaaca cttggaggag ttcagaaggt 4740 ctctttgtga tgttgctatt tcgttgaaca attgtgcgta ttacacacag ttggacgacg 4800 ctgtatggga ggttcataag accgcccctc caggttcgtt tgtttataaa agtctggtga 4860 agtatttgtc tgataaagtt ctttttagaa gtttgtttat agatggctct agttgttaaa 4920 ggaaaagtga atatcaatga gtttatcgac ctgacaaaaa tggagaagat cttaccgtcg 4980 atgtttaccc ctgtaaagag tgtcatgtgt tccaaagttg ataaaataat ggttcatgag 5040 aatgagtcgt tgtcagaggt aaaccttctt aaaggagtca agcttattga tagtggatac 5100 gtctgtttag ccggtttggt cgtcacgggc gagtggaact tgcctgacaa ttgcagagga 5160 ggtgtgagcg tgtgtctggt ggacaaaagg atggaaagag ccgacgaggc cactctcgga 5220 tcttactaca cagcagctgc aaagaaaaga tttcagttca aggtcgttcc caattatgct 5280 ataaccaccc aggacgcgat gaaaaacgtc tggcaagttt tagtcaatat tagaaatgta 5340 aagatgtcag cgggtttctg tccgctttct ctggagtttg tgtcggtgtg tatcgtttat 5400 agaaataata taaaattagg tttgagagag aagattacaa acgtgagaga tggagggccc 5460 atggaactta cagaagaagt tgttgatgag ttcatggaag atgtccctat gtcaatcagg 5520 cttgcaaagt ttcgatctcg aaccggaaaa aagagtgatg tccgtaaagg gaaagttagt 5580 ggtagtgatc ggtcagtgcc gaacaagaac tatagaaatg ttaaggattt tggaggaatg 5640 agttttaaaa agaataattt aatcgatgat gattcggaga ctactgtcgc cgaatcggat 5700 tcgttttaaa tatgtcttac agtatcacta ctccatctca gttcgtgttc ttgtcatcag 5760 cgtgggccga cccaatagag ttaattaatt tatgtactaa tgctttagga aatcagtttc 5820 aaacacaaca agctcgaact gtcgttcaaa gacaattcag tgaggtgtgg aaaccttcac 5880 cacaagtaac tgttaggttt cctgacagcg actttaaggt gtacaggtac aatgcggtat 5940 tagacccgct agtcacagca ctgttaggtg catttgacac tagaaatagg ataatagaag 6000 ttgaaaatca ggcgaacccc acgactgccg aaacgttaga cgctactcgt agagtagacg 6060 acgcaacggt ggccataagg agcgctataa ataatttagt agtagaattg atcagaggaa 6120 ccggatctta caatcggagc tctttcgaga gctcttctgg tttggtttgg acctctggtc 6180 ctgcaacttg aggtagtcaa gatgcataat aaataacgga ttgtgtccgt aatcacacgt 6240 ggtgcgtacg ataacgcata gtgtttttcc ctccacttaa atcgaagggt tgtgtcttgg 6300 atcgcgcggg tcaaatgtat atggttcata tacatccgca ggcacgtaat aaagcgaggg 6360 gttcgaatcc ccccgttaac cgccggtagg ggccca 6396 //