ID HE818430; SV 1; linear; genomic RNA; STD; VRL; 6394 BP. XX AC HE818430; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Huidong, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6394 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; 8f4bb06985607485c175e67b1d802444. XX FH Key Location/Qualifiers FH FT source 1..6394 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Huidong" FT /mol_type="genomic RNA" FT /country="China:Guangdong province" FT /db_xref="taxon:12242" FT CDS 69..3419 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HAU1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HAU1" FT /protein_id="CCH64060.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGGKPVPNFQ FT KEAFDRYAEVPEDAVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT YTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLISKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRNLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALQDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLRNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYINRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLHGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4902..5708 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HAU2" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HAU2" FT /protein_id="CCH64061.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITSVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKVSSSDRSMPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5711..6190 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q77H57" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77H57" FT /protein_id="CCH64062.1" FT /translation="MSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6394 BP; 1861 A; 1214 C; 1542 G; 1777 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 60 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctggac actgtccgag 120 gaaataactc cttggtcaat gatctagcaa agcgtcgtct ttacgacaca gcggttgaag 180 agtttaacgc tcgtgaccgc aggcccaaag tgaacttttc aaaagtaata agcgaggagc 240 agacgcttat tgctacccgg gcatatccag aattccaaat tacattttat aacacgcaaa 300 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 360 aaattcccta tggatcattg acttatgaca taggtgggaa ttttgcatcg catctgttca 420 agggacgagc atacgtacac tgctgcatgc ccaatctgga cgttcgagac atcatgcggc 480 acgaaggcca gaaagacagt atcgaactat acctttctag gctagagaga gggggaaaac 540 cagtccccaa cttccaaaag gaagcatttg acagatacgc agaagttcct gaggacgctg 600 tctgtcacaa tactttccag acatgtgaac atcagccgat gcagcaatca ggcagagtgt 660 atgccattgc gctacacagc atatatgaca tacccgctga tgagttcgga gcggcactct 720 tgagaaaaaa cgtccatacg tgctatgccg ctttccactt ctctgagaac ctgcttcttg 780 aagattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaaat 840 tgaccttttc ttttgcatca gagagtactc ttaattactg tcatagttat tctaatattc 900 ttaagtatgt gtgcaaaact tacttcccgg cctctaatag agaggtttac atgaaggagt 960 ttttagtcac cagggttaat acctggtttt gtaagttttc tagaatagat acttttcttt 1020 tgtacaaagg tgtggcccat aaaagtgtag atagtgagca gttttatact gcaatggaag 1080 acgcatggca ttacaaaaag actcttgcaa tgtgcaacag cgagagaatt ctccttgagg 1140 attcatcatc agtcaattac tggtttccca aaatgaggga tatggtcatt gtaccattat 1200 tcgacatttc tttggagact agtaagagga cgcgcaagga agtcttagtg tccaaggatt 1260 tcgtgtatac agtgcttaac cacattcgaa cataccaggc gaaagctctt acatacgcaa 1320 atgttttgtc cttcgtcgaa tcaattcgat cgagggtaat cattaacggt gtgacagcga 1380 ggtccgaatg ggatgtggac aaatctttgt tacaatcctt gtccatgacg ttttacctgc 1440 atactaagct tgccgttcta aaggatgact tactgattag caagtttagt ctcggttcaa 1500 aaacggtgtg tcagcatgtg tgggatgaga tttcgctggc gtttgggaac gcatttccct 1560 ccgtgaaaga gaggctcttg aacaggaatc ttatcagagt ggcaggtgat gcattagaga 1620 tcagggtgcc tgatctatat gtgactttcc acgacagatt agtgactgag tacaaggcct 1680 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1740 atgcactttc ggagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1800 cccagatgtg ccaatctttg gaagttgacc caatgacagc agcgaaggtt atagtcgcgg 1860 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctacagag gcgaatgttg 1920 cgctagcttt acaggatcaa gagaaggctt cagaaggtgc tttggtagtt acctcgaggg 1980 aagttgaaga accgtccatg aagggttcaa tggccagagg agagttacaa ttagccggtc 2040 ttgctggaga tcatccggag tcgtcctatt ctaggaacga ggagatagag tctttagagc 2100 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2160 cgggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcgtcactat 2220 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2280 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttgatc aaaccaacgg 2340 ccaagagtca tgcatggggt gttgtcgaaa cccacgcgag gaagtatcat gtagcacttt 2400 tggaatatga tgagcagggt gtggtaacat gcgatgattg gagaagagta gctgtcagct 2460 ctgagtctgt tgtttattcc gacatggcga aactcagaac tctgcgcaga ctgcttcgaa 2520 acggtgaacc gcatgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2580 gaaaaactaa agaaattctt tccagggtta attttgatga agatctaatt ctagtacctg 2640 ggaagcaagc cgcggaaatg atcagaagac gtgcgaattc ctcagggatt attgtggcca 2700 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttgggaaa agcacacgct 2760 gtcagttcaa gaggttattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2820 ttcttgtggc gatgtcattg tgcgaaattg catatgttta cggagacaca cagcagattc 2880 catacatcaa tagagtttca ggattcccgt accccgccca ttttgccaaa ttggaagttg 2940 acgaggttga gacacgcaga actactctcc gttgtccagc cgatgtcaca cattatctga 3000 acaggagata tgagggcttt gtcatgagta cttcttcggt taaaaagtct gtttcgcagg 3060 agatggttgg cggagccgcc gtgatcaatc cgatctcaaa acccctgcat ggcaagatct 3120 tgacgtttac ccaatcggat aaagaagctc tactttcaag agggtattca gatgttcaca 3180 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3240 ctccagtctc tatcattgca ggagacagcc cacatgtttt ggttgcattg tctaggcaca 3300 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatt attagagatc 3360 tagagaaact tagctcgtac ttgttagata tgtataaggt cgatgcagga acacaatagc 3420 aattacagat tgactcggtg ttcaaaggtt ccaatctttt tgtggcagcg ccaaagactg 3480 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggtaac agcaccatgt 3540 tgaataattt tgatgctgtt accatgaggt tgactgacat ttcattgaat gtcaagattg 3600 catattggat atgtccaagt ctgttgctgc gcctaaggat cagatcaaac cactaatacc 3660 tatggtacga acggcggcag aaaagccacg ccagactgga ctattggaaa atttagtggc 3720 gatgattaaa aggaacttta atgcacctga gttgtctggc atcattgata ttgaaaatac 3780 tgcatcttta gttgtagata agtttttcga tagttatctg cttaaagaaa aaagaaaacc 3840 aaataaaaac gtttctttat tcagtagaga gtctctcaat agatggttag aaaagcaaga 3900 acaggtaaca ataggccagc tcgcagattt tgattttgtg gatttgccag cagttgatca 3960 gtacagacac atgatcaaag cacaacccaa gcaaaaattg gacacttcaa tccaaacgga 4020 gtacccggct ttgcagacga ttgtgtacca ttcaaaaaag atcaatgcaa tatttggccc 4080 gttgtttagt gagcttacta ggcaattact ggacagtgtt gattcgagca gatttttgtt 4140 tttcacaaga aagacaccag cgcagatcga ggatttcttc ggagatctcg acagtcatgt 4200 gccgatggat gtcttggagc tggatatatc aaaatacgac aaatctcaga atgaattcca 4260 ctgtgcagta gaatatgaga tctggcgaag attgggtttt gaagatttct tgggagaagt 4320 ttggaagcaa gggcatagaa agaccaccct caaggattat accgcaggta tcaaaacttg 4380 catctggtat caaagaaaga gcggggacgt cacgacgttc attggaaaca ctgtgatcat 4440 agctgcatgt ttggcctcga tgcttccgat ggagagaata atcaaaggag ccttttgtgg 4500 tgacgatagt ctgctgtact tcccaaaggg ttgtgagttt ccggatgtgc aacactccgc 4560 gaatcttatg tggaattttg aagcaaaact gtttaaaaaa cagtatggat acttttgcgg 4620 aaggtatgta atacatcacg acagaggatg cattgtgtat tacgatcccc taaagttgat 4680 ctcgaaactt ggtgctaaac acatcaagga ttgggaacac ttggaggagt tcagaaggtc 4740 tctttgtgat gttgctgttt cgttgaacaa ttgtgcgtat tacacacagt tggacgacgc 4800 tgtatgggag gttcataaga ccgcccctcc aggttcgttt gtttataaaa gtctggtgaa 4860 gtatttgtct gataaagttc tttttagaag tttgtttata gatggctcta gttgttaaag 4920 gaaaagtgaa tatcaatgag tttatcgacc tgacaaaaat ggagaagatc ttaccgtcga 4980 tgtttacccc tgtaaagagt gttatgtgtt ccaaagtcga taaaataatg gttcatgaga 5040 atgagtcatt gtcagaggta aaccttctta aaggagttaa gcttattgat agtggatacg 5100 tctgtttagc tggtttggtc gtcacgggcg agtggaactt gcctgacaat tgcagaggag 5160 gtgtgagcgt gtgtctggtg gacaaaagga tggaaagagc cgatgaggcc actctcggat 5220 cttactacac agcagctgcg aagaaaagat ttcagttcaa ggtcgttcca aattatgcta 5280 taaccaccca ggacgcgatg aaaaacgtct ggcaagttct agtcaatatt agaaatgtaa 5340 agatgtcagc gggtttctgt ccgctttctc tggagttcgt gtcggtgtgt atcgtttata 5400 gaaataatat aaaattaggt ttgagagaga agattacaag tgtgagagat ggagggccca 5460 tggaacttac agaagaagtt gttgatgagt tcatggaaga tgtccctatg tcaatcaggc 5520 ttgcaaagtt tcgatctcga accgggaaaa agagtgatgt ccgtaaaggg aaagttagta 5580 gtagtgatcg gtcaatgccg aacaagaact atagaaatgt taaggatttt ggaggaatga 5640 gttttaaaaa gaataattta atcgatgatg attcggagac tactgtcgcc gaatcggatt 5700 cgttttaaat atgtcttaca gtatcactac tccatctcag tttgtgttct tgtcatcagc 5760 gtgggctgac ccaatagagt taattaattt atgtactaat gccttaggaa atcagtttca 5820 aacacaacaa gctcgaactg tcgttcaaag acaattcagt gaggtgtgga aaccttcacc 5880 acaagtaact gttaggttcc ccgacagtga ctttaaggtg tacaggtaca atgcggtatt 5940 agacccgcta gtcacagcac tgttaggtgc atttgacact agaaatagaa taatagaagt 6000 tgaaaatcag gcgaacccca cgactgccga aacgttagac gctactcgta gagtagacga 6060 cgcaacggtg gccataagga gcgctataaa taatttagta gtagaattga tcagaggaac 6120 tggatcttat aatcggagct ctttcgagag ctcttctggt ttggtttgga cctccggtcc 6180 tgcaacttga ggtaatcaag atgcataata aataacggat tgtgtccgta atcacacgtg 6240 gtgcgtacga taacgcatag tgtttttccc tccacttaaa tcgaagggtt gtgtcttgga 6300 acgcgcgggt caaatgtata tggttcatat acatccgcag gcacgtaata aagcgagggg 6360 ttcgaatccc cccgttaccc ccggtagggg ccca 6394 //