ID HE818426; SV 1; linear; genomic RNA; STD; VRL; 6396 BP. XX AC HE818426; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Hechi, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6396 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; c567a2e8700b88f369c639af5463f061. XX FH Key Location/Qualifiers FH FT source 1..6396 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Hechi" FT /mol_type="genomic RNA" FT /country="China:Guangxi province" FT /db_xref="taxon:12242" FT CDS 69..3419 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HAS9" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HAS9" FT /protein_id="CCH64048.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGGKTVPNFQ FT KEAFDRYAEIPEDAVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETGKRTRKEVLVSKDFV FT FTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLVSKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALQDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLKNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYINRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLHGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4905..5711 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HAX5" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HAX5" FT /protein_id="CCH64049.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKISSSDRSVPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5714..6193 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:I2HAT1" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:I2HAT1" FT /protein_id="CCH64050.1" FT /translation="MSYSITTPSQFVYLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDNDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6396 BP; 1864 A; 1214 C; 1540 G; 1778 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa ttactattta 60 caattacaat ggcatacaca cagacagcta ccacatcagc tttgctggac actgtccgag 120 gaaataactc cttggtcaat gatctagcaa agcgtcgtct ttatgacaca gcggtcgaag 180 agtttaacgc tcgtgaccgc aggcccaaag tgaacttttc aaaagtaata agcgaggagc 240 agacgcttat tgctacccgg gcatatccag aattccaaat tacattttac aacacgcaaa 300 atgccgtgca ttcgcttgca ggtggattgc gatctttaga actggaatat ctgatgatgc 360 aaattcccta cggatcattg acttatgaca taggcgggaa ttttgcatcg catctgttca 420 agggacgagc atacgtacac tgctgcatgc ccaacctgga cgttcgagac atcatgcggc 480 atgaaggcca gaaagacagt attgaactat acctttctag gctagagaga gggggaaaaa 540 cagtccctaa cttccaaaag gaagcatttg acagatacgc agaaattcct gaggacgctg 600 tctgtcataa tactttccag acatgtgaac atcagccgat gcagcaatca ggcagagtgt 660 acgccattgc gctacacagc atatatgaca tacccgctga tgagttcggg gcggcactct 720 tgaggaaaaa cgtccatacg tgctatgccg cttttcactt ctctgagaac ctgcttcttg 780 aggattcata cgtcaatttg gacgaaatca acgcgtgttt ttcgcgcgat ggagacaaat 840 tgaccttttc ttttgcatca gagagtactc ttaattactg tcatagttat tctaatattc 900 ttaagtatgt gtgcaaaact tacttccctg cctctaatag agaggtttac atgaaggagt 960 ttttagtcac cagggttaac acctggtttt gtaagttttc tagaatagat acttttcttt 1020 tgtacaaagg tgtggcccat aaaagtgtag atagtgagca gttttatact gcaatggaag 1080 acgcatggca ttacaaaaag actcttgcaa tgtgcaacag tgagagaatt ctccttgagg 1140 attcatcatc agttaattac tggtttccca aaatgaggga tatggtcatc gtaccattat 1200 tcgacatttc tttggagact ggtaagagga cgcgcaagga agtcttagtg tccaaggatt 1260 tcgtgtttac agtgcttaac cacattcgaa cataccaggc gaaagctctt acatacgcaa 1320 atgttttgtc cttcgtcgaa tcgattcgat cgagggtaat cattaacggt gtaacagcga 1380 ggtccgaatg ggatgtggac aaatctttgt tgcaatcctt gtccatgacg ttttacctgc 1440 atactaagct tgccgttcta aaggatgact tactggttag caagtttagt ctcggttcaa 1500 aaacggtgtg tcagcatgtg tgggatgaga tttcgctggc ttttgggaac gcatttccct 1560 ccgtaaaaga gaggctctta aacaggaaac ttatcagagt ggcaggtgac gcattagaga 1620 tcagggtgcc tgatctatat gtgactttcc acgacagatt agtgactgag tacaaggcct 1680 ctgtggacat gcctgcgctt gacattagga agaagatgga agaaacggaa gtgatgtaca 1740 atgcactttc ggagttatcg gtgttaaggg agtctgacaa attcgatgtt gatgtttttt 1800 cccagatgtg ccaatctttg gaagttgacc caatgacagc agcgaaggtt atagtcgcgg 1860 tcatgagcaa tgagagcggt ctgactctca catttgaacg acctacagag gcgaatgttg 1920 cgctagcttt gcaagatcaa gagaaggctt cagaaggtgc tttggtagtt acctcgaggg 1980 aagttgaaga accgtccatg aagggttcga tggccagagg agagttacaa ttagctggtc 2040 ttgctggaga tcatccggag tcgtcttatt ctaggaacga ggagatagag tctttagagc 2100 agtttcatat ggcaacggca gattcgttaa ttcgtaagca gatgagctcg attgtgtaca 2160 caggtccgat taaagttcag caaatgaaaa actttatcga tagcctggta gcatcactat 2220 ctgctgcggt gtcgaatctc gtcaagatcc tcaaagatac agctgctatt gaccttgaaa 2280 cccgtcaaaa gtttggagtc ttggatgttg catctaggaa gtggttgatc aaaccaacgg 2340 ccaagagtca tgcatggggt gttgtcgaaa cccacgcgag gaagtatcat gtggcgcttt 2400 tggaatatga tgagcagggt gtggtaacat gcgatgattg gagaagagta gctgtcagct 2460 ctgagtctgt tgtttattcc gatatggcga aactcagaac tctgcgccga ctgcttaaaa 2520 acggtgaacc gcacgtcagt agcgcaaagg ttgttcttgt ggacggagtt ccgggctgtg 2580 gaaaaaccaa agaaattctt tccagggtta attttgatga agatctaatt ctagtacctg 2640 ggaagcaagc tgcggaaatg atcagaagac gtgcgaattc ctcagggatt attgtggcca 2700 cgaaggacaa cgttaaaacc gttgattctt tcatgatgaa ttttggaaaa agcacacgct 2760 gtcagttcaa gagattattc attgatgaag ggttgatgtt gcatactggt tgtgttaatt 2820 ttcttgtggc gatgtcattg tgcgaaattg catatgttta cggagacaca cagcagattc 2880 catacatcaa tagagtttca ggattcccgt atcccgccca ttttgccaaa ttggaagttg 2940 acgaggttga gacacgcaga actactctcc gttgtccagc tgatgtcaca cattatctga 3000 acaggagata tgagggcttt gtcatgagta cttcttcggt taaaaagtct gtttcgcagg 3060 agatggttgg cggagccgct gtgatcaatc cgatctcaaa acccctgcat ggcaagatcc 3120 tgacgtttac ccaatcggat aaagaagctc tgctttcaag agggtattca gatgttcaca 3180 ctgtgcatga agtgcaaggc gagacatact ctgatgtttc actagttagg ttaaccccta 3240 caccagtctc catcattgca ggagacagcc cacatgtttt ggttgcattg tcgaggcaca 3300 cctgttcgct caagtactac actgttgtta tggatccttt agttagtatt attagagatc 3360 tagagaaact tagctcgtac ttgttagata tgtataaggt cgatgcagga acacaatagc 3420 aattacagat tgactcggtg ttcaaaggtt ccaatctttt tgtggcagcg ccaaagactg 3480 gtgatatttc tgatatgcag ttttactatg ataagtgtct cccaggtaac agcaccatga 3540 tgaataattt tgatgctgtt accatgaggt tgactgacat ttcattgaat gtcaaagatt 3600 gcatattgga tatgtccaag tctgttgctg cgcctaagga tcagatcaaa ccactaatac 3660 ctatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aatttagtgg 3720 cgatgattaa aaggaacttt aacgcacccg agttgtctgg catcattgat attgaaaaca 3780 ctgcatcttt agttgtagat aaagtttttt cgatagttat ttgcttaagg aaaaaagaaa 3840 accaaataaa aatgtttctt tgttcagtag agagtctctc aatagatggt tagaaaagca 3900 agaacaggta acaataggcc agctcgcaga ttttgatttt gtggatttgc cagcagttga 3960 tcagtataga cacatgatca aagcacaacc caagcaaaaa ttggacactt caatccaaac 4020 ggagtacccg gctttgcaga cgattgtgta ccattcaaaa aagatcaatg caatatttgg 4080 cccgttgttt agtgagctta ctaggcaatt actggacagt gttgattcga gcagattttt 4140 gtttttcaca agaaagacac cagcgcagat tgaggatttc ttcggagatc tcgacagtca 4200 tgtgccgatg gatgtcttgg agctggatat atcaaaatac gacaaatctc agaatgaatt 4260 ccactgtgca gtagaatatg aaatctggcg aagattgggt tttgaagatt tcttgggaga 4320 agtttggaag caagggcata gaaagaccac cctcaaggat tataccgcag gtatcaaaac 4380 ttgcatctgg tatcaaagaa agagcgggga cgtcacgacg ttcattggaa acactgtgat 4440 cattgctgca tgtttggcct cgatgcttcc gatggagaaa ataatcaaag gagccttttg 4500 tggtgacgat agtctgctgt acttcccaaa gggttgtgag tttccggatg tgcaacactc 4560 cgcgaatctt atgtggaatt ttgaagcaaa actgtttaaa aaacagtatg gatacttttg 4620 cggaaggtat gtaatacacc acgacagagg atgcattgtg tattacgatc ctctaaagtt 4680 gatctcaaaa cttggtgcta aacacatcaa ggattgggaa cacttggagg agttcagaag 4740 gtctctttgt gatgttgctg tttcgttgaa caattgtgcg tattacacac agttggacga 4800 cgctgtatgg gaggttcata agaccgcccc tccaggttcg tttgtttata aaagtctggt 4860 gaagtatttg tccgataaag ttctttttag aagtttgttt atagatggct ctagttgtta 4920 aaggaaaagt gaatatcaat gagtttatcg acctgacaaa aatggagaag atcttaccgt 4980 cgatgtttac ccctgtaaag agtgtcatgt gttccaaagt tgataaaata atggttcatg 5040 agaatgagtc attgtcagag gtaaaccttc ttaaaggagt taagcttatt gatagtggat 5100 acgtctgttt agccggtctg gtcgtcacgg gcgagtggaa cttgcctgac aattgcagag 5160 gaggtgtgag cgtgtgtctg gtggacaaaa ggatggaaag agccgacgag gccactctcg 5220 gatcttacta cacagcagct gcaaagaaaa gatttcagtt caaggtcgtt cccaattatg 5280 ctataaccac ccaggacgcg atgaaaaacg tctggcaagt tttagtcaat attagaaatg 5340 taaagatgtc agcgggtttc tgtccgcttt ctctggagtt tgtgtcggtg tgtatcgttt 5400 atagaaataa tataaagtta ggtttgagag agaaaattac aaacgtgaga gatggagggc 5460 ccatggaact tacagaagaa gttgttgatg agttcatgga agatgtccct atgtcaatca 5520 ggcttgcaaa gtttcgatct cgaaccggaa aaaagagtga tgtccgtaaa gggaaaatta 5580 gtagtagtga tcggtcagtg ccgaacaaga actatagaaa tgttaaggat tttggaggaa 5640 tgagttttaa aaagaataat ttaatcgatg atgattcgga gactactgtc gccgaatcgg 5700 attcgtttta aatatgtctt acagtatcac tactccatct cagttcgtgt acttgtcatc 5760 agcgtgggcc gacccaatag agttaattaa tttatgtact aatgccttag gaaatcagtt 5820 ccaaacacaa caagctcgaa ctgtcgttca aagacagttc agtgaggtgt ggaaaccttc 5880 accacaagta actgttagat tccctgacaa tgactttaag gtgtataggt acaatgcggt 5940 attagacccg ctagtcacag cactgttagg tgcatttgac actagaaata gaataataga 6000 agttgaaaat caggcgaacc ccacgactgc cgaaacgtta gacgctactc gtagagtaga 6060 cgacgcgacg gtggccataa ggagcgctat aaataattta gtagtagaat tgatcagagg 6120 aactggatct tataatcgga gctctttcga gagctcttct ggtttggttt ggacctctgg 6180 tcctgcaact tgaggtagtc aagatgcata ataaataacg gattgtgtcc gtaatcacac 6240 gtggtgcgta cgataacgca tagtgttttt ccctccactt aaatcgaagg gttgtgtctt 6300 ggatcgcgcg ggtcaaatgt atatggttca tatacatccg caggcacgaa taaagcgagg 6360 ggttcgaatc cccccgttac ccccggtagg ggccca 6396 //