ID HE818421; SV 1; linear; genomic RNA; STD; VRL; 6394 BP. XX AC HE818421; XX DT 21-MAY-2012 (Rel. 112, Created) DT 21-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Tobacco mosaic virus isolate Fenggang-2, complete genome XX KW complete genome. XX OS Tobacco mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6394 RA Yang J.; RT ; RL Submitted (13-MAY-2012) to the INSDC. RL Yang J., Tobacco Research Institute of Chinese Academy of Agriculture, RL Tobacco disease protection, 11# Keyuan 4 Road, Laoshan Distinc, Qingdao RL 266101, Shandong Province, CHINA. XX RN [2] RA Yang J.; RT "The population variation of tobacco mosaic virus in tobacco of China"; RL Unpublished. XX DR MD5; b9895b55bcd822d92ad324d607af5176. XX FH Key Location/Qualifiers FH FT source 1..6394 FT /organism="Tobacco mosaic virus" FT /host="Nicotiana tabacum" FT /isolate="Fenggang-2" FT /mol_type="genomic RNA" FT /country="China:Guizhou Province" FT /db_xref="taxon:12242" FT CDS 68..3418 FT /gene="relicase" FT /product="replication protein" FT /db_xref="GOA:I2HAR7" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I2HAR7" FT /protein_id="CCH64033.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVEEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSL FT TYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGGKPVPNFQ FT KEAFDRYAEIPEDAVCHNTFQTCEHQPMQQSGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSYVNLDEINACFSRDGDKLTFSFASESTLNYCHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT YTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLH FT TKLAVLKDDLLISKFSLGSKTVCQHVWDEISLAFGNAFPSVKERLLNRKLIRVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKKMEETEVMYNALSELSVLRESDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVMSNESGLTLTFERPTEANVALALHDQEKASEGALVVT FT SREVEEPSMKGSMARGELQLAGLAGDHPESSYSRNEEIESLEQFHMATADSLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGVVTCDDWRRVAVSSESVVYSDMAKLRTL FT RRLLRNGEPHVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANS FT SGIIVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNFLVAMSLCEIAYV FT YGDTQQIPYINRVSGFPYPAHFAKLEVDEVETRRTTLRCPADVTHYLNRRYEGFVMSTS FT SVKKSVSQEMVGGAAVINPISKPLHGKILTFTQSDKEALISRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPVSIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSSYLLD FT MYKVDAGTQ" FT CDS 4902..5708 FT /gene="mp" FT /product="movement protein" FT /db_xref="GOA:I2HAR5" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:I2HAR5" FT /protein_id="CCH64034.1" FT /translation="MALVVKGKVNINEFIDLTKMEKILPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIDSGYVCLAGLVVTGEWNLPDNCRGGVSVCLVDKRMERADEAT FT LGSYYTAAAKKRFQFKVVPNYAITTQDAMKNVWQVLVNIRNVKMSAGFCPLSLEFVSVC FT IVYRNNIKLGLREKITNVRDGGPMELTEEVVDEFMEDVPMSIRLAKFRSRTGKKSDVRK FT GKNSSSDRSMPNKNYRNVKDFGGMSFKKNNLIDDDSETTVAESDSF" FT CDS 5711..6190 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q77H57" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77H57" FT /protein_id="CCH64035.1" FT /translation="MSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLVVELIRGTGSYNRSSFESSSGLVWTSGPAT" XX SQ Sequence 6394 BP; 1863 A; 1213 C; 1543 G; 1774 T; 1 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattcaat tactatttac 60 aattacaatg gcatacacac agacagctac cacatcagct ttgctggaca ctgtccgagg 120 aaataactcc ttggtcaatg atctagcaaa gcgtcgtctt tacgacacag cggttgaaga 180 gtttaacgct cgcgaccgca ggcccaaagt gaacttttca aaagtaataa gcgaggagca 240 gacgcttatt gctacccggg catatccaga attccaaatt acattttata acacgcaaaa 300 tgccgtgcat tcgcttgcag gtggattgcg atctttagaa ctggaatatc tgatgatgca 360 aattccctat ggatcattga cttatgacat aggtgggaat tttgcatcgc acctgttcaa 420 gggacgagca tacgtacact gctgcatgcc caacctggac gttcgagaca tcatgcggca 480 cgaaggccag aaagacagta tcgaactata cctttctagg ctagagagag ggggaaaacc 540 agtccccaac ttccaaaagg aagcatttga cagatacgca gaaattcctg aggacgctgt 600 ctgtcacaat acttttcaga catgtgaaca tcagccgatg cagcaatcag gcagagtgta 660 tgccattgcg ctacacagca tatatgacat acccgctgat gagttcggag cggcactctt 720 gaggaaaaac gtccatacgt gctatgccgc tttccacttc tctgagaacc tgcttcttga 780 agattcatac gtcaatttgg acgaaatcaa cgcgtgtttt tcgcgagatg gagacaaatt 840 gactttttct tttgcatcag agagtactct taattactgt catagttatt ctaatattct 900 taagtatgtg tgcaaaactt acttccctgc ctctaataga gaggtttaca tgaaggagtt 960 tttagtcacc agggttaata cttggttttg taagttttct agaatagata cttttctttt 1020 gtacaaaggt gtggcccata aaagtgtaga tagtgagcag ttttatactg caatggaaga 1080 cgcatggcat tacaaaaaga ctcttgcaat gtgcaacagt gagagaattc tccttgagga 1140 ttcatcatca gtcaattact ggtttcccaa aatgagggat atggtcattg taccattatt 1200 cgacatttct ttggagacta gtaagaggac gcgcaaggaa gtcttagtgt ccaaggattt 1260 cgtgtataca gtgcttaacc acattcgaac ataccaggcg aaagctctta catacgcaaa 1320 tgttctgtcc ttcgtcgaat cgattcgatc gagggtaatc attaacggtg tgacagcgag 1380 gtccgaatgg gatgtggaca aatctttgtt acaatccttg tccatgacgt tttacctgca 1440 tactaagctt gccgttctaa aggatgactt actgattagc aagtttagtc tcggttcaaa 1500 aacggtgtgt cagcatgtgt gggatgagat ttcgctggcg tttgggaacg cgtttccctc 1560 cgtgaaagag aggctcttga acaggaaact tatcagagtg gcaggtgatg cattagagat 1620 cagggtgcct gatctatatg tgactttcca cgacagatta gtgactgagt acaaggcctc 1680 tgtggacatg cctgcgcttg acattaggaa gaagatggaa gaaacggaag tgatgtacaa 1740 tgcactttcg gagttatcgg tgttaaggga gtctgacaaa ttcgatgttg atgttttttc 1800 ccagatgtgc caatctttgg aagttgaccc aatgacagca gcaaaggtta tagtcgcggt 1860 catgagcaat gagagcggtc tgactctcac atttgaacga cctacagagg cgaatgttgc 1920 gctagcttta catgatcaag agaaggcttc agaaggtgct ttggtagtta cctcgaggga 1980 agttgaagaa ccgtccatga agggttcaat ggccagagga gagttacaat tagccggtct 2040 tgctggagat catccggagt cgtcctattc taggaacgag gagatagagt ctttagagca 2100 gtttcatatg gcaacggcag attcgttaat tcgtaagcag atgagctcga ttgtgtacac 2160 gggtccgatt aaagttcagc aaatgaaaaa ctttatcgat agcctggtag catcactatc 2220 tgctgcggtg tcgaatctcg tcaagatcct caaagataca gctgctatcg accttgaaac 2280 ccgtcaaaag tttggagtct tggatgttgc atctaggaag tggttgatca aaccaacggc 2340 caagagtcat gcatggggtg ttgtcgaaac ccacgcgagg aagtatcatg tggcgctttt 2400 ggaatatgat gagcagggtg tggtaacatg cgacgattgg agaagagtag ctgtcagctc 2460 tgagtctgtt gtttattccg acatggcgaa actcagaact ctgcgcagac tgcttcgaaa 2520 cggagaaccg catgtcagta gcgcaaaggt tgttcttgtg gatggggttc cgggctgtgg 2580 aaaaaccaaa gaaattcttt ccagggttaa ttttgatgaa gatctaattc tagtacctgg 2640 gaagcaagcc gcggaaatga tcagaagacg tgcgaattcc tcagggatta ttgtggccac 2700 gaaggacaac gttaaaaccg ttgattcttt catgatgaat tttgggaaaa gcacacgctg 2760 tcagttcaag aggttattca ttgatgaagg gttgatgttg catactggtt gtgttaattt 2820 tcttgtggcg atgtcattgt gcgaaattgc atatgtttac ggagacacac agcagattcc 2880 atacatcaat agagtttcag gattcccgta ccccgcccat tttgccaaat tggaagttga 2940 cgaggttgag acacgcagaa ctactctccg ttgtccagcc gatgtcacac attatctgaa 3000 caggagatat gagggctttg tcatgagtac ttcttcggtt aaaaagtctg tttcgcagga 3060 gatggttggc ggggccgccg tgatcaatcc gatctcaaaa cccctgcatg gcaagatctt 3120 gacgtttacc caatcggata aagaagctct gatttcaaga gggtattcgg atgttcacac 3180 tgtgcatgaa gtgcaaggcg agacatactc tgatgtttcg ctagttaggt taacccctac 3240 tccagtctcc atcattgcag gagacagccc acatgttttg gttgcattgt cgaggcacac 3300 ctgttcgctc aagtactaca ctgttgttat ggatccttta gttagtatta ttagagatct 3360 agagaaactt agctcttact tgttagatat gtataaggtc gatgcaggaa cacaatagca 3420 attacagatt gactcggtgt tcaaaggttc caatcttttt gtggcagcgc caaagactgg 3480 tgatatttct gatatgcagt tttactatga taagtgtctc ccaggtaaca gcaccatgat 3540 gaataatttt gatgctgtta ccatgaggtt gactgacatt tcattgaatg tcaaagattg 3600 catattggat atgtccaaat ctgttgctgc gcctaaggat cagatcaaac cactaatacc 3660 tatggtacga acggcggctg aaatgccacg ccagactgga ctattggaaa atttagtggc 3720 gatgattaaa aggaacttta aygcacccga gttgtctggc atcattgata ttgaaaatac 3780 tgcatcatta gttgtagata agtttttcga tagttatttg cttaaagaaa aaagaaaacc 3840 aaataaaaat gtttctttgt tcagtagaga gtctctcaat agatggttag aaaagcaaga 3900 acaggtaaca ataggccagc tcgctgattt tgattttgtg gatttgccag cagttgatca 3960 gtacagacac atgatcaaag cacaacccaa gcaaaaattg gacacttcaa tccaaacgga 4020 gtatccggct ttgcagacga ttgtgtacca ttcaaaaaag atcaatgcaa tatttggccc 4080 gttgtttagt gagcttacta ggcaattact ggacagtgtt gattcgagca gatttttgtt 4140 tttcacaaga aagacaccag cgcagattga ggatttcttt ggagatctcg acagtcatgt 4200 gccgatggat gtcttggagc tggatatatc aaaatacgac aaatctcaga atgaatttca 4260 ctgtgcagta gaatatgaga tctggcgaag attgggcttt gaagatttct tgggagaagt 4320 ttggaagcaa gggcatagaa agaccaccct caaggattat accgcaggta tcaaaacttg 4380 catctggtat caaagaaaga gcggggacgt cacgacgttc attggaaaca ctgtgatcat 4440 agctgcatgt ttggcctcga tgcttccgat ggagaaaata atcaaagggg ccttttgtgg 4500 tgacgatagc ctgctgtact tcccaaaggg ttgtgagttt ccggatgtgc aacactccgc 4560 gaatcttatg tggaattttg aagcaaaact gtttaaaaaa cagtatggat acttttgcgg 4620 aaggtatgta atacatcacg acagaggatg cattgtgtat tacgatcccc taaagttgat 4680 ctcgaaactt ggtgctaaac acatcaagga ttgggaacac ttagaggagt tcagaaggtc 4740 tctttgtgat gttgctgttt cgttgaacaa ttgtgcgtat tacacacagt tggacgacgc 4800 tgtatgggag gttcataaga ccgcccctcc aggttcgttt gtttataaaa gtctggtgaa 4860 gtatttgtct gataaagttc tttttagaag tttgtttata gatggctcta gttgttaaag 4920 gaaaagtgaa tatcaatgag tttatcgacc tgacaaaaat ggagaagatc ttaccgtcga 4980 tgttcacccc tgtaaagagt gtcatgtgtt ccaaagttga taaaataatg gttcatgaga 5040 atgagtcatt gtcagaggta aaccttctta aaggagttaa gcttattgat agtggatacg 5100 tctgtttagc tggtttggtc gtcacgggcg agtggaactt gcctgacaat tgcagaggag 5160 gtgtgagcgt gtgtctggtg gacaaaagga tggaaagagc cgacgaggcc actctcggat 5220 cttactacac agcagctgca aagaaaagat ttcagttcaa ggtcgttcca aattatgcaa 5280 taaccaccca ggacgcgatg aaaaacgtct ggcaagtttt agtcaatatt agaaatgtaa 5340 agatgtcagc gggtttctgt ccgctttctc tggagtttgt gtcggtgtgt atcgtttata 5400 gaaataatat aaaattaggt ttgagagaga agattacaaa tgtgagagat ggagggccca 5460 tggaacttac agaagaagtt gttgatgagt tcatggaaga tgtccctatg tcaatcaggc 5520 ttgcaaagtt tcgatctcga accggaaaaa agagtgatgt ccgtaaaggg aaaaatagta 5580 gtagtgatcg gtcaatgccg aacaagaact atagaaatgt taaggatttt ggaggaatga 5640 gttttaaaaa gaataattta atcgatgatg attcggagac tactgtcgcc gaatcggatt 5700 cgttttaaat atgtcttaca gtatcactac tccatctcag ttcgtgttct tgtcatcagc 5760 gtgggccgac ccaatagagt taattaattt atgtactaat gccttaggaa atcagtttca 5820 aacacaacaa gctcgaactg tcgttcaaag acaattcagt gaggtgtgga aaccttcacc 5880 acaagtaact gttaggttcc ctgacagtga ctttaaggtg tacaggtaca atgcggtatt 5940 agacccgcta gtcacagcac tgttaggcgc atttgatact agaaatagaa taatagaagt 6000 tgaaaatcag gcgaacccca cgactgccga aacgttagac gctactcgta gagtagacga 6060 cgcaacggtg gccataagga gcgctataaa taatttagta gtagaattga tcagaggaac 6120 cggatcttat aatcggagct ctttcgagag ctcttctggt ttggtttgga cctctggtcc 6180 tgcaacttga ggtagtcaag atgcataata aataacggat tgtgtccgta atcacacgtg 6240 gtgcgtacga taacgcatag tgtttttccc tccacttaaa tcgaagggtt gtgtcttgga 6300 acgcgcgggt caaatgtata tggttcatat acatccgcag gcacgtaata aagcgagggg 6360 ttcgaatccc cccgttaccc ccggtagggg ccca 6394 //