ID HE806449; SV 1; circular; genomic DNA; STD; VRL; 2545 BP. XX AC HE806449; XX DT 26-OCT-2012 (Rel. 114, Created) DT 26-SEP-2014 (Rel. 122, Last updated, Version 2) XX DE Sida yellow vein virus segment DNA-B complete sequence, isolate 10B_1_C1210 XX KW complete viral segment. XX OS Sida yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2545 RA Jeske H.; RT ; RL Submitted (02-MAY-2012) to the INSDC. RL Molecular biology and virology of plants, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, D-70550, GERMANY. XX RN [2] RX DOI; 10.1007/s11262-014-1090-8. RX PUBMED; 24943118. RA Jeske H., Kober S., Schafer B., Strohmeier S.; RT "Circomics of Cuban geminiviruses reveals the first alpha-satellite DNA in RT the Caribbean"; RL Virus Genes 49(2):312-324(2014). XX DR MD5; 57c1d6ea0b20fc69eee1c53edbcd6265. XX FH Key Location/Qualifiers FH FT source 1..2545 FT /organism="Sida yellow vein virus" FT /segment="DNA-B" FT /host="Sida spp." FT /isolate="10B_1_C1210" FT /mol_type="genomic DNA" FT /country="Cuba:Vinales" FT /collection_date="Aug-2007" FT /db_xref="taxon:223321" FT CDS 383..1159 FT /transl_table=1 FT /gene="BV1" FT /product="NSP" FT /note="nuclear shuttle protein" FT /db_xref="GOA:K4Q6Q4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:K4Q6Q4" FT /protein_id="CCH63347.1" FT /translation="MNMYPFRNKRGSSFIQRRYYPRNNVFNRLTACKRHDRKRRLGHEN FT KPTDEPKMSAQRIHENQYSPEFVMTQNSAISTFISYPNLGKTEPSRSRSYIKLKRLRFR FT GTVKIERVQSDVNMDGSSPKLEGVFSIVIVVDRKPHLGPSGSLHTFDELFGAMIHSHGN FT PRITPSLKDRFYIRHVSKHVISVDKDTTMFDVEGSTSLSNRRFNCWASFKDLERESCKG FT VYDNISKNALLVYYCWMSDTMSKASNFVSFDLDYIG" FT CDS complement(1196..2077) FT /transl_table=1 FT /gene="BC1" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:K4QC17" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:K4QC17" FT /protein_id="CCH63348.1" FT /translation="MDSQLVNPPSAFNYIESHRDEYQLCHDLTEIVMQFPSTAAQLTAR FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSIVGSRGPIEMRPGESWASRSTIGLGQSDVD FT SEIENELHPYRHLSRLGTTVLDPGESASIVGAQRAESNITMSLGQLNELVRTTVQECIN FT SNCRASQPKSLQ" XX SQ Sequence 2545 BP; 666 A; 535 C; 543 G; 801 T; 0 other; acccggactg gccgccccgc gccccccccc cccctggtgc cctttctcac gcgccctctc 60 ctggtgctct ttctccacgc gctctctcat tggtgtaggt gcctcacgct cttttttgtg 120 tttggccttt aattcaaatt aaaggttaat tctttatcgc gcgatttgac tatgattttc 180 gcgatgactg accatgtcca cttttacctg gtggtggacg tggcttaatt ttagccatgt 240 tgctgagcct atttgtgttt aattattgaa ctggcttttc tatatatttt gaaagaaata 300 tgtattatat gttaagtggc tcagctgtgc cccacgttta tattgttatt cctaataata 360 gtttagccat tattaatacc gtatgaatat gtatcctttt aggaataaac gtgggtcctc 420 attcattcaa cgtcgttatt atccacgcaa caacgtgttt aaccgtttaa ccgcttgtaa 480 gagacatgat cggaaacgac gactgggtca tgagaataag cccactgatg agcccaagat 540 gtcagcccaa cgcattcatg agaatcaata tagtccagag tttgttatga cacaaaactc 600 cgccatctca accttcatta gctatcctaa tcttggtaag acagaaccca gtcgaagcag 660 gtcttatata aagttaaaac gacttcgttt cagagggact gtgaagattg agcgtgttca 720 atcggatgtg aacatggatg gttcgtctcc caaattagaa ggagttttct ctattgttat 780 agttgtggat cgtaaacctc acttgggtcc gagtggtagt cttcatacat tcgatgaact 840 attcggtgca atgattcata gccatggtaa tcctagaata actccgtctc tgaaagatcg 900 cttctatatt cgacatgtgt ccaaacatgt gatatctgtc gataaggata cgacaatgtt 960 tgatgtggaa gggtctacat cgctctctaa taggcgattc aattgctggg catcgttcaa 1020 ggatctggaa cgcgaatcat gcaaaggtgt atatgacaac attagcaaga acgccctatt 1080 agtttattat tgctggatgt cagatacgat gtctaaggca tccaattttg tatcgtttga 1140 tctcgattat atcggatgat taataaaata acattttatt aacgacaata aaattctatt 1200 gtaatgattt gggctgagaa gccctacaat tactattaat acactcttgg accgttgtcc 1260 tgactaactc gtttaattgg cccaatgaca ttgttatatt ggattccgct ctctgggccc 1320 ccacaatcga agccgactct cctgggtcta gaactgttgt ccctagcctg ctcagatgtc 1380 tgtatggatg cagctcgttc tctatttccg agtccacatc tgactggccc aatcctattg 1440 tacttctgga agcccatgat tcaccaggcc gcatttcgat tgggcctctt gacccaacta 1500 tggacataga tgcgcatctt atgggcttcc tttcccattt accatagtcc acatgggaga 1560 agtccacatc tttgtctgtg aactgtttgg ataggatctt gaccgtcggt gcccggaagg 1620 ggatatccac cgagtgtttt gctgtggaca atttcagctt ccctttgaat ttggcgaaat 1680 gggtcctctg atgaacattc gtatctgaaa ctctgtaata gagtttccat ggaattgggt 1740 ctttgagtga gaagaaggaa gctgagaaat agtggagatc tatgttgcat ctgatcggga 1800 aagtccacga cgcctgtaaa gactcattgt ctgtcattcg tttgtcatgt atctccacta 1860 ttaccgtccc ggaagcgtta attgggactt gttgtctgta ctctattaca cagtgatcta 1920 tcttcataca gcttctgcta agtctcgccg tcaattgcgc cgccgtcgaa ggaaattgca 1980 tcactatctc agttaagtca tggcagagct gatattcatc tctgtgcgac tctatatagt 2040 tgaaggcact tggaggattc actaactgag aatccatctg agaaaaatgg ccgcgcagcg 2100 gcaccgctct cggaattgga actggtgaag gaataataag ggtttttatg tctgaatagt 2160 cgatgatgtc attttaagaa taaatgactg actggaaata aactatgaac tgatttatga 2220 gaaacccaga aatttacata agaacacgaa gaacaatcgt ttaactttca agaaatttct 2280 agtgtttttg ggaaagggga gaaatatgaa gagtaaagtt gtgtttatgt caggtttgat 2340 ctggcagagg ttatttatac accctttttt tgttgattta tttgcagttt tttatcgatg 2400 gcatttttgt aataaaagag ggtcaccgat tgaggctctc tcaaacttgc tctagcaatt 2460 ggggaacggg gtctcattta tacaagaagc ctcaatagaa ctctcaatct caatcgcaca 2520 cgtggcggcc atccgctata atatt 2545 //