ID HE806439; SV 1; circular; genomic DNA; STD; VRL; 2574 BP. XX AC HE806439; XX DT 26-OCT-2012 (Rel. 114, Created) DT 26-SEP-2014 (Rel. 122, Last updated, Version 2) XX DE Tomato yellow distortion leaf virus segment DNA-B isolate 03B_1_C1208 DE complete sequence XX KW complete viral segment. XX OS Tomato yellow distortion leaf virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2574 RA Jeske H.; RT ; RL Submitted (02-MAY-2012) to the INSDC. RL Molecular biology and virology of plants, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, D-70550, GERMANY. XX RN [2] RX DOI; 10.1007/s11262-014-1090-8. RX PUBMED; 24943118. RA Jeske H., Kober S., Schafer B., Strohmeier S.; RT "Circomics of Cuban geminiviruses reveals the first alpha-satellite DNA in RT the Caribbean"; RL Virus Genes 49(2):312-324(2014). XX DR MD5; 0e69e1454e96cdaf8fadf0d5c1288869. XX FH Key Location/Qualifiers FH FT source 1..2574 FT /organism="Tomato yellow distortion leaf virus" FT /segment="DNA-B" FT /host="Sida spp." FT /isolate="03B_1_C1208" FT /mol_type="genomic DNA" FT /country="Cuba:Vinales" FT /collection_date="Aug-2007" FT /db_xref="taxon:564944" FT CDS 395..1168 FT /transl_table=1 FT /gene="NSP" FT /product="NSP" FT /note="nuclear shuttle protein" FT /db_xref="GOA:K4Q6P9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:K4Q6P9" FT /protein_id="CCH63312.1" FT /translation="MMYPLRGKRGSYFPNRRFNSRNTVFNRSTAGKRHDGKRRGGSSAK FT SSDEPKMSAQRIHENQYGPDFTMAHNSAISTYISYPDLGKTEPNRSRSYIKLKRLRFKG FT TVKIERVQSDLNMDGSTPKVEGVFSLVIVVDRKPHLGPSGCLHTFDELFGARIHSHGNL FT SVTPSLKDRYYIRHVCKRVLSVEKETLMVDVEGSVSLSNRRFNCWSMFKDLDRDSCKGV FT YGNISKNALLVYYCWMSDTPSKASSFVSFDLDYVG" FT CDS complement(1228..2109) FT /transl_table=1 FT /gene="BC1" FT /product="MP" FT /note="movement protein" FT /db_xref="GOA:K4QC15" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:K4QC15" FT /protein_id="CCH63313.1" FT /translation="MESQLANPPNAFNYIESHRDEYQLSHDLTEIVLQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRIGYRGPIEIRPGESWASRSTIGTGLTDAD FT SEVENELHPYRHLNRLGTSVLDPGESASIVGAQRAESNITMSVAQLNELVRTTVQQCIN FT NNCQASQAKTFN" XX SQ Sequence 2574 BP; 642 A; 564 C; 608 G; 760 T; 0 other; acccggatgg ccgcgcgccc cccctcggtg ccgtacactc tcacgcgcgc cccccctggt 60 gccgtgacca cactcgctct ctcattggtg tttgtaaaaa cacggcccct ctttttgaac 120 tggcctttaa ttcaaattaa aggttaatgc tttcgtcgcg cgatgttttt tggactttga 180 aagattgtct cgcgacgaat taatatggcc cattgtactt ggttatagac gtggctaaat 240 ttgggccgtg ctgctgagtc tatttgtgac taatgtttaa ccacttactt atatatttga 300 cgggactgaa atcttattgt ctatccgact cagcacccca ccacgtttat tggtttatct 360 actaattatt tcgtatatcc ataattgtcg tgggatgatg tatcctctga ggggtaaacg 420 tggatcttac ttccctaacc gacgatttaa ctcacgtaac actgtgttta accgttcaac 480 cgctgggaaa cgacatgacg ggaaacgtcg aggaggaagt tctgctaagt ccagtgatga 540 gcccaagatg tcggcccaac gcatacatga gaatcagtat gggcctgatt ttacaatggc 600 ccataattca gctatctcga cgtatatcag ttatccagac ttgggcaaga ccgagcccaa 660 ccggagcagg tcctatatca agttgaaacg actacgtttc aaggggactg tgaagattga 720 acgtgttcaa tcggatctga acatggacgg atcaactccc aaggtcgagg gagttttctc 780 acttgtgatt gttgtggatc gcaaacccca cttgggaccc tctggttgtc ttcacacatt 840 tgacgagcta ttcggtgcta ggatccacag ccatggaaac ctcagcgtaa cgccttcctt 900 gaaggatcgt tattacatcc gccacgtgtg caaacgtgta ctgtccgtcg agaaggagac 960 actgatggtg gacgtggaag gctctgtttc cctatctaac aggcgtttca actgttggtc 1020 tatgtttaag gatcttgatc gtgattcatg taaaggtgtt tatggtaaca taagcaagaa 1080 cgccctgtta gtttattact gttggatgtc ggatactcct tcaaaggcgt cctcctttgt 1140 atcttttgac cttgattatg ttggttaatg caataaataa tgtttatcca aagctgatta 1200 tctatatatg aaaaggaaaa tacaagttta attaaatgtt ttggcttgag aagcctggca 1260 attattgtta atacattgtt ggactgtcgt cctgaccaac tcgttcaact gggccactga 1320 catcgtgatg ttggactcgg ctctctgggc tcccacaatc gaggcagact ctcctgggtc 1380 cagtacgctg gtccctagcc tgttcaggtg tctgtatggg tggagttcgt tctccacctc 1440 tgaatccgca tctgtcaggc ctgttcctat tgtactcctg gaagcccatg actcaccagg 1500 ccttatttca attggtcctc tatacccaat tcttgacatg gacgcgcatc tgatgggctt 1560 cctttcccat ttcccgtagt cgacatgaga aaaatccaca tctttgtcgg tgaactgttt 1620 ggacaagatc ttcactgtcg gtgcccggaa aggaatgtcg acggagtgtt ttgcggtcga 1680 taatttcagc ttccccttga atttggcgaa gtgggtcctc tgatgaacat tcgtatcgca 1740 aactctgtaa tagagtttcc atggaattgg gtctttgagt gagaagaaag aagctgaaaa 1800 gtagtggaga tctatgttgc atctgatcgg aaaagtccac gacgcctgta atgactcgtt 1860 gtccgtcatc ctcttgtcgt ggatctccac aattaccgac ccggtggcgt taatcggcac 1920 ttgctgcctg tactctatga cgcagtggtc gatcttcatg cagctacgac tgagtctagc 1980 tgtcaactga gacgccgtcg acggaaattg tagtacgatc tcagttaggt catgagaaag 2040 ctgatactcg tctctgtgtg actctatgta attgaaagcg ttcggaggat tagctaactg 2100 agattccata tgaagaagaa aggccgcgca gcggaatcgt cttgagaata gctgactggt 2160 tatgaaaaat ctgggatttt tgtcaaagca ggataagaag ctctttgagg aagacgataa 2220 tggcgaaact gttctgggtt gattatatga tctgagtggt ggtctgtgga actattgagc 2280 ttaatttgtt gggcattaaa ctattttaag tcgttcagcc aacgattcac taaatttggt 2340 taagagaaat gtttaagaga agtcggatat gatgaacatg atatgaggct gaacttgttt 2400 atatagaaac ccagaaccct ctcgatggca tttttgtaat aagaggggtg tacaccaatt 2460 ggagctctct caaacttgcg ctatgaattg gtgactggtg tacaatatat actagaaggc 2520 tctatagaac tctcaatctc ctccgcacac gtggcggcca tccgatataa tatt 2574 //