ID HE806437; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC HE806437; XX DT 07-JAN-2013 (Rel. 115, Created) DT 03-JAN-2016 (Rel. 127, Last updated, Version 2) XX DE Chilli leaf curl virus complete genome, isolate T-37 XX KW complete genome. XX OS Chilli leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Akhtar S.; RT ; RL Submitted (08-MAY-2012) to the INSDC. RL Akhtar S., College of Agricultural and Marine, Sciences, Sultan Qaboos RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, RL OMAN. XX RN [2] RA Khan A.J., Al-Zaidi A.M., Akhtar S.; RT "Molecular characterization and infectivity analysis of Chilli leaf curl RT virus from Oman"; RL Unpublished. XX DR MD5; aa5dacf721ea3b4415b7fee650d35232. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Chilli leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="T-37" FT /mol_type="genomic DNA" FT /country="Oman:Manah" FT /isolation_source="leaf" FT /collected_by="Abdul Rehman Mohammed Obeid Al-Matroushi" FT /collection_date="2011" FT /db_xref="taxon:172278" FT CDS 149..514 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:H2DGX7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:H2DGX7" FT /protein_id="CCH63301.1" FT /translation="MWDPLLNEFPESVHGFRCMLAVKYLQLVENSYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARLEGTPSSQLRQPICQPCCCPHCPRHKGKGMGQQAHES FT EAQDVQDVQKPRCSEGM" FT CDS 309..1082 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:A0A0X1KUJ3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUJ3" FT /protein_id="CCH63302.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITHR FT VGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDNE FT PSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEGAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1079..1483) FT /gene="C3" FT /gene_synonym="REn" FT /product="replication enhancement protein" FT /db_xref="GOA:A0A0X1KUL1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A0A0X1KUL1" FT /protein_id="CCH63303.1" FT /translation="MDSRTGEPITAAQAENGVFIWEITNPLYFKITEHHNRPFLRSQDI FT ITVQIRFNHNLRKALGMHKCFLTYRIWTTLQPQTGHFLRVFKTQVLNVLNNFAVISINN FT VNRAVDHVLWNVLDHVVYVNQSYSIKYNLD" FT CDS complement(1224..1628) FT /gene="C2" FT /gene_synonym="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:H2DH10" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:H2DH10" FT /protein_id="CCH63304.1" FT /translation="MRPSSPSQAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREWRVYLGDNKSPVFQDNRAPQQAIPEKPRHHHSADTVQSQP FT EESVGDAQMFSNLPNLDDLTASDWSFLKGI" FT CDS complement(1531..2616) FT /gene="C1" FT /gene_synonym="Rep" FT /product="replication initiation protein" FT /db_xref="GOA:H2DGX5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:H2DGX5" FT /protein_id="CCH63305.1" FT /translation="MPRAGRFNINAKNYFLTYPNCSLTKEEALSQLQNLETPVNKLFIR FT VCRELHENGEPHLHVLVQFEGKYQCTNNRFFDLISPTRSAHFHPNIQRAKSSSDVKAYV FT EKDGDFIDSGVFQIDGRSARGGCQSANDAYAEAINSGSKAAALNILREKAPKDYVLQFH FT NLNANLDRIFTPPPDVYVSPFLSSSFDQVPDELEEWASVNVVGAAARPLRPMSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDASYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKHWALKNATFITLTGPL FT YSGSNQSAAQAGQEGDQASSR" FT CDS complement(2166..2459) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H2DGV3" FT /protein_id="CCH63306.1" FT /translation="MGNLIYTCSSNSKANINAQTTDSSTSFPQPGQHISIRTFRELRAL FT QMSKPMWRKTETSLTLEFSRSMADQLEEVANLPTTHMPRQSIQGPRLRPSIF" XX SQ Sequence 2761 BP; 769 A; 555 C; 625 G; 812 T; 0 other; accggatggc cgcgattttt tttaccgtgg accccgcgat gcacgtgctg acaaatacat 60 gtggaccaat taaaaacgtc cctcaaagct taattgtttc gtggtcccct ctataaactt 120 gggctccaag tagtgggttt ttatcacaat gtgggatcct ttactaaatg agtttcccga 180 aagtgttcat gggtttaggt gtatgttagc agtgaaatat ctgcaattag tagaaaattc 240 atattcgcca gacacattag ggtacgattt aatcagggat ttaatttcag ttattagggc 300 tagaaattat gtcgaagcga ccagcagata taatcatttc cacgcccgcc tcgaaggtac 360 gccgtcgtct caacttcgac agcccatatg ccagccgtgc tgctgccccc attgtccgcg 420 tcacaaaggc aaaggcatgg gccaacaggc ccatgaatcg gaagcccagg atgtacagga 480 tgtacagaag cccagatgtt ccgaggggat gtgaaggccc atgtaaagtc cagtcttatg 540 agcaacggga tgatattaag catactggta ttgttcgttg tgttagtgat gttactcgtg 600 gatctggaat tacccacaga gtgggtaaga ggttctgtgt taaatcgata tattttttag 660 gtaaagtctg gatggatgag aatatcaaga agcagaatca cacgaatcag gtcatgttct 720 ttttggtccg tgatagaagg ccctatggaa gcagcccaat ggattttgga caggttttta 780 atatgttcga taatgagccc agtaccgcaa ccgtgaagaa tgacctccgg gataggtttc 840 aagtgatgag gaaatttcat gctacagtta ttggtgggcc ctctggaatg aaggaacagg 900 ctttagttaa gagatttttt agaattaaca gtcatgtaac ttataatcat caagaaggag 960 ccaagtacga gaatcatact gaaaacgcct tgttgttgta tatggcatgt acacatgcct 1020 ctaatccagt gtatgctaca ttgaaaatac gtatctattt ctatgattca gtatcaaatt 1080 aatcaagatt atattttatt gaatatgatt ggtttacata tacaacgtga tctaatacat 1140 tccataatac atgatcaact gctctattta cattgttaat actaattaca gcaaaattat 1200 taagcacatt caatacttgg gttttaaata cccttaagaa atgaccagtc tgaggctgta 1260 aggtcgtcca gattcggtag gttagaaaac atttgtgcat ccccaacgct ttcctcaggt 1320 tgtgattgaa ccgtatctgc actgtgatga tgtcttggct tctcaggaat ggcctgttgt 1380 ggtgctctgt tatcttgaaa tacaggggat ttgttatctc ccagataaac acgccattct 1440 ctgcttgagc tgcagtgatg ggttcccctg tgcgtgaatc catagccgtg gcaacgtaat 1500 gcgatgaaat atgaacagcc gcaatcgagg tcaacgcgac gacgcctggt ccccttcttg 1560 gccagcctgt gctgcacttt gattggaacc tgagtagagt gggcctgtga gggtgatgaa 1620 ggtcgcattc tttaaagccc aatgtttgag tgcggaattc ttttcttcat ccaagaactc 1680 tttatagctg gaattgggtc ctggattgca gaggaagata gcgggaattc cacctttaat 1740 ttgaactggc tttccgtatt ttgtatttga ttgccagtcc ctttgggccc ccatgaattc 1800 tttaaagtgt tttagataat gcgggtcgac gtcatcaatg acgttatacg aggcatcatt 1860 gctgtacact ttagggctaa ggtctaagtg accacatagg tagttatgtg gacccaacga 1920 cctagcccac atggtcttcc cggttcgact atcaccctca atcacaatac tcatgggtct 1980 caaaggccgc gcagcggcac ccaccacgtt cacagaagcc cattcctcaa gttcatcagg 2040 aacttgatca aaagaagaag aaagaaaagg agaaacataa acatccggtg gaggcgtaaa 2100 aatcctatct aaattagcat ttaaattatg aaattgtaaa acataatctt tgggagcttt 2160 ctcccttaaa atattgaggg ccgcagcctt ggaccctgaa ttgattgcct cggcatatgc 2220 gtcgttggca gattggcaac ctcctctagc tgatctgcca tcgatctgga aaactccaga 2280 gtcaatgaag tctccgtctt tctccacata ggctttgaca tctgaagagc tcttagctct 2340 ctgaatgttc ggatggaaat gtgctgaccg ggttggggaa atgaggtcga agaatctgtt 2400 gtttgtgcat tgatatttgc cttcgaattg gacgagcacg tgtagatgag gttccccatt 2460 ctcgtgcaat tctctgcaaa ccctaataaa taatttattt actggggttt ctaagttttg 2520 taattgggaa agggcctctt ctttagtaag agagcagtta ggatatgtta ggaaataatt 2580 tttagcattt atattgaatc tccccgctct aggcatattg gtggacactc aaacttacta 2640 tgcaatcggt ggaatggggg acaatttata tgtgtccacc aatggcaaat tggtaattgt 2700 tgttacatta aaaaaattta aaattcaaat tccgacaaaa gcggccatcc gcattaatat 2760 t 2761 //