Dbfetch
ID HE806430; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC HE806430; XX DT 07-JAN-2013 (Rel. 115, Created) DT 12-FEB-2013 (Rel. 115, Last updated, Version 2) XX DE East African cassava mosaic Zanzibar virus complete segment DNA B, isolate DE SB4 XX KW complete genome; complete viral segment. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Akhtar S.; RT ; RL Submitted (06-MAY-2012) to the INSDC. RL Akhtar S., College of Agricultural and Marine, Sciences, Sultan Qaboos RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, RL OMAN. XX RN [2] RX DOI; 10.1007/s11262-012-0838-2. RA Khan A.J., Akhtar S., Al-Matrushi A.M., Fauquet C.M., Briddon R.W.; RT "Introduction of East African cassava mosaic Zanzibar virus to Oman harks RT back to Zanzibar, the capital of Oman"; RL Virus Genes 0:0(2012). XX DR MD5; feb4dcfde4a8ef28bfb0aa64867e2e05. XX CC Related sequence: XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="SB4" FT /mol_type="genomic DNA" FT /country="Oman:A'Seeb" FT /isolation_source="host leaf" FT /collected_by="Abdul Rehman Mohammed Obeid Al-Matroushi" FT /collection_date="2011" FT /clone="C-10" FT /db_xref="taxon:223275" FT CDS 336..1136 FT /gene="BV1" FT /gene_synonym="NSP" FT /product="nuclear shuttle protein" FT /db_xref="GOA:L0P164" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:L0P164" FT /protein_id="CCH63263.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGCRVTPYVNRKTAGKQTVKS FT RVSRKLAYESPKGLYTRRSLEDIHNGASLKLPQQGRHTSYVTLPRRGIYGNGGRSVDYL FT PPQSLRVSGTVNISQSGGDDNMGERTTMRGIFFMVCLVDKKPFVPEGVSVLPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDQIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1268..2191) FT /gene="BC1" FT /gene_synonym="MP" FT /product="movement protein" FT /db_xref="GOA:L0P0Y5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:L0P0Y5" FT /protein_id="CCH63264.1" FT /translation="MDNHFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWKILYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLEHFRSQSMRMDPSTTPTDFDNESTEYPYQRLHRLNTPELDPGNSVSQTQSDSVSR FT KDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2743 BP; 761 A; 470 C; 726 G; 786 T; 0 other; accggatggc cgcgcccgaa aaagcatatg ggccccagaa tggcccccac gcactaagta 60 atgtcagcca accatgtgca agactgggag actcggtagt tacgaaggga ggattaagtg 120 gtccctacgc acgaagtttg acaggcaatt ttattgctat gtgtgtatca tatttttata 180 ggtgtgttac agggcaatct aagattatgt tatggggcct atcataaaaa agcaaaatat 240 aggttcctat ttacatattg attagagttt tatgtgcgga tatatgatcc gccacgtgtt 300 tataatggat atggattgtc ctataaatat gtggcatgtc tcccgttcgt caatgcaaga 360 tgtattccgt atacagacgt gggtataaga cgccgtatag gagtccgtat ggctgccgtg 420 taacaccata tgtgaatcgt aagaccgctg gtaaacagac ggttaaatct cgtgtatcgc 480 gaaagttggc gtatgaatcg ccaaaaggtc tatatacgcg acgctcattg gaggatatac 540 ataatggggc ttccttgaag ttgcctcaac aggggcgcca tacgtcctac gtgacacttc 600 cacgtcgagg catctacggt aatgggggta ggtctgttga ctacctcccc ccccaaagct 660 tgagggtttc tgggaccgtc aacatcagtc aatccggtgg tgatgacaat atgggagaga 720 gaacgaccat gaggggtatt tttttcatgg tttgtcttgt cgataagaaa cccttcgttc 780 cagagggggt cagcgtattg ccgacgttca atgagttgtt cggggaatat gaatccgtgt 840 atggcatgcc taggttgaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagatcaga tccagaagcc ttttagtcta cgtcgaagac 960 taagtggagg gaaatatcct atatggtcgt cgttcaagga tgtggataat agtagtacag 1020 gtggtaacta taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat 1140 aaaacgatat aagtgtttta tggacattca tgatgtggga tcgaactaaa caagagatga 1200 acattaatgg gaagcataaa gagtgttatt atgtgccgaa gcaaatatcg tacatataaa 1260 tggtttatta caatggcctt ggtgcttcgg atttgatctt gatgaggcac ttgttgatgg 1320 tactctcaag cagtgtctcg agatcctttc tggataccga gtcggattgg gtctgtgata 1380 ccgagttacc tgggtctaac tctggtgtgt ttaatctgtg tagtcgctgg taaggatatt 1440 cggtggactc gttgtcgaag tctgttggtg ttgtcgatgg gtccattctc atggactgtg 1500 aacgaaagtg ttccagcctt gctgggccgg atgagcttgg tagcccaatc tgagacttag 1560 tggcccatgt ttcgccaggt aggatggtga tgggcctgtg ggttatgggt cgttgactat 1620 gagcagttgg agttggattt agtaatctcc gtctagtttc ccctttttcc acggaccaga 1680 agtctatgca gtcttttgtg tatcccttgg ataagatgtt aatcgttggg ggtttgaaac 1740 gtatgtccgt ggaatgtttg gccgaggata atctgagctt ggccttgatg gatgcgaatt 1800 tcacgccttc tatgacgttt gagtcttcga ctcggtataa gattttccaa ggggagggtt 1860 ctgaaatcga aaaataagta gaagagaagt agtggaggtc tacgttgcaa gctatgggga 1920 aagtgaatgc tgcctgagct gcgtcttcaa ggctgacgcg attatctcgg atttctacga 1980 taaccgaccc agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga 2040 ttttcataca tcggcctttg agtcgcatgg tagcctgctc gaatgagctg gggaattgga 2100 gattgattgg tgcagcatcg tttgttaatg cgtactctgt gcgtttgctg tttatataat 2160 tattgtctgt gacggtgaag tggttgtcca tgctacgaat gaaaaaaaca agggttagta 2220 aacggagaga agtcagaaca agatatataa aatgtcttgt ggacatgtaa tcatatatgc 2280 atttggtata tataagaaca cacagagatc agaacaggac catatatgtt aaattggccg 2340 cgcagcggat tgggattcag aaaaaatcta ctaacaaaga aaaaagtcga atcgtgttat 2400 gtgatgtcaa tcacttacat aatcactgaa gaagcagtct ggagggaatt cctgtttcaa 2460 ttgggagaaa aaaaaagaaa acaaacgtat tgggagaaaa aggaaagtga gcatatgtta 2520 tgcgccgtgt ccttaaatta aatgctatgg ggtgtttata taggcgtgaa taagcgacat 2580 gtggtagaga gagaaagaag agagaagcga gagcaattgg agacacctcg gtggatgtct 2640 ctacggaatt ggagacaata tatagtgtct ccaaatggca taatggtaaa taggcatatc 2700 gattttcaaa atttgaacca aaagcggcca tccgtataat att 2743 //