ID HE806428; SV 1; circular; genomic DNA; STD; VRL; 2793 BP. XX AC HE806428; XX DT 07-JAN-2013 (Rel. 115, Created) DT 12-FEB-2013 (Rel. 115, Last updated, Version 2) XX DE East African cassava mosaic Zanzibar virus complete segment DNA A, isolate DE SB2 XX KW complete genome; complete viral segment. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2793 RA Akhtar S.; RT ; RL Submitted (06-MAY-2012) to the INSDC. RL Akhtar S., College of Agricultural and Marine, Sciences, Sultan Qaboos RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, RL OMAN. XX RN [2] RX DOI; 10.1007/s11262-012-0838-2. RA Khan A.J., Akhtar S., Al-Matrushi A.M., Fauquet C.M., Briddon R.W.; RT "Introduction of East African cassava mosaic Zanzibar virus to Oman harks RT back to Zanzibar, the capital of Oman"; RL Virus Genes 0:0(2012). XX DR MD5; af2edb13ae7ac3684596f83745ac534a. XX CC Related sequence: XX FH Key Location/Qualifiers FH FT source 1..2793 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="SB2" FT /mol_type="genomic DNA" FT /country="Oman:A'Seeb" FT /isolation_source="host leaf" FT /collected_by="Abdul Rehman Mohammed Obeid Al-Matroushi" FT /collection_date="2011" FT /clone="C-6" FT /db_xref="taxon:223275" FT CDS 182..538 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:L0P1H8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:L0P1H8" FT /protein_id="CCH63255.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHHKQNMGQQAHVP FT EAQDVQNVSKPRCP" FT CDS 342..1115 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:L0P2R4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:L0P2R4" FT /protein_id="CCH63256.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNPVVAPTVRVTTSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILCKIWMDENIKKQNHTNHVMFFLVRDRRPYGLSPQDFGQVFNMFDNE FT PTTATVNNDLRDRYQVLRKFYATVVGGPSGMKEQALVNRFFRINNHVVYNHQEQARYEN FT HTENALLLYMACTHASNPVYATLKIRIYVYDAVTN" FT CDS complement(1112..1516) FT /gene="AC3" FT /gene_synonym="REn" FT /product="replication enhancement protein" FT /db_xref="GOA:L0P2Q7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L0P2Q7" FT /protein_id="CCH63257.1" FT /translation="MDSRTGELITAPQARNGVFTWAITNPLYFAITNHDRRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLRSVDHVMYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1257..1664) FT /gene="AC2" FT /gene_synonym="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:L0P0Y0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L0P0Y0" FT /protein_id="CCH63258.1" FT /translation="MPPSSPSTSHCSQMPIKVQHRTAKTRAIRRRRVDLECGCSFYIHI FT NCINHGFSHRGTHHCASSKEWRFYLGNNKSPIFRNHQPRQEAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1573..2652) FT /gene="AC1" FT /gene_synonym="Rep" FT /product="replication initiation protein" FT /db_xref="GOA:L0P0Y3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L0P0Y3" FT /protein_id="CCH63259.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNIPTPTNKKYIK FT VCRELHEDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGSHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFMSSSFTNVPEELEVWVSENVMGSAARPWRPTSIVIEGD FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFVTLHEPL FT FSNAHQSPTPHSEDQGHQT" FT CDS complement(2238..2495) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V379" FT /protein_id="CCH63260.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHDQHISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2793 BP; 728 A; 553 C; 713 G; 799 T; 0 other; accggatggc cgcgcccgaa aaagaaggtg gaccccacgg tatggccgcg cctgtgaaag 60 ggaagtggtc cccgcgcaca ttgttcctgt cagccagttc atattcgcgc gtgaagtcta 120 gactagaatt tggttgggtt gtcgttatag acttcgtcgc gaagtagtag agcgcgtcaa 180 catgtgggat ccattgttaa acgatttccc tgaaaccgtt cacggtttcc gttccatgct 240 tgctgttaaa tacctgttac atcttgaaca ggaatacgat cgcggtactg tcggggctga 300 gtatatacgg gatctaatag gggtgctacg gtgtaagagt tatgtcgaag cgaccaggag 360 atataataat ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat 420 acacgaaccc tgttgttgcc cccactgtcc gcgtcaccac aagcaaaata tgggccaaca 480 ggcccatgta ccggaagccc aagatgtaca gaatgtatcg aagcccagat gtccctaagg 540 gctgtgaagg cccatgtaag gttcagtcgt atgaacagag ggatgatgtt aagcacacgg 600 gtatggtccg atgtgtcagt gatgttactc gtgggtcagg cattacccat agagtcggga 660 agaggttctg tgtgaagtcc atatatatat tgtgcaagat ttggatggat gagaatatca 720 agaagcaaaa ccatacgaac catgttatgt ttttcctcgt gcgagataga aggccttatg 780 gtctgagtcc gcaagatttt ggacaagtgt tcaacatgtt cgacaatgaa cctactactg 840 caactgtgaa taatgatctt agggaccggt atcaggtgtt acgtaaattc tatgcgactg 900 ttgttggtgg accctctggg atgaaggaac aagctctggt taataggttt tttaggatca 960 ataatcatgt agtgtataat catcaggaac aggccaggta tgagaatcat actgagaatg 1020 cgttgttatt gtatatggca tgtacacatg cctcaaatcc tgtgtatgcg actctgaaaa 1080 tacgcatcta tgtctatgat gcagtgacga attaataaag gttgaatttt attgcatgtt 1140 gctccgtaac ttggagcgtg tttagtaata catcgtacat aacatgatca acagatcgaa 1200 gtacagtgtt aatggaaata acgcctatca tatctaaata cttgagcact tgagatctaa 1260 atactcttaa gaaaagacca gtctgaggcc gtaaggtcgt ccagaccttg aagttgagaa 1320 aacacttgtg aatccccaat gccttccgga tgttgtggtt gaaccgtatc tggattgtga 1380 tgatgtcgtg gttcatgttc cctggcctcc tgtcgtggtt ggtgattgcg aaatataggg 1440 gatttgttat tgcccaggta aaaacgccat tccttgcttg aggcgcagtg atgagttccc 1500 ctgtgcgaga atccatggtt gatgcagtta atatggatat agaacgagca gccgcattcg 1560 aggtctaccc gcctacgtct gatggccctg gtcttcgctg tgcggtgttg gactttgatg 1620 ggcatttgag aacaatggct cgtggagggt gacgaaggtg gcattcttta aagcccaggc 1680 tttaagagac tggttctttt cttcatccag aaactcttta tatgatgatg ttggtcctgg 1740 attgcagagg aagatagtgg gaatgccgcc tttaatttga attggcttcc cgtacttcgt 1800 attgctttgc cagtcccgtt gggcccccat gaattctttg aagtgcttta gatagtgggg 1860 gtcgacgtca tcaatgacgt tgtaccaggc gtcgttgctg tagacctttg gactgagatc 1920 caggtgtcca cacaaataat tatgtgggcc caatgacctg gcccatagtg tcttccctgt 1980 acgactatca ccttcaataa caatactagt gggtctccaa ggccgcgcag cggaacccat 2040 cacgttctcg gaaacccaga cttcaagttc ctcaggaacg ttagtaaaag aagaagacat 2100 aaaaggagaa acataaggag ctggtggctc ttgaaaaatc ctatctaaat tactacttaa 2160 gttatgatat tgaaaaataa attcttttgg gagtttctcc ttaataatta gaagtgctgc 2220 tgccttggaa cctgagttta atgcttcggc acatgcgtca ttagcattgt ggctgccgcc 2280 tctagccgat ctggcgtcga tctggaattc gccccactca gtggtatccc catctttgtc 2340 gatgtaggac ttgacgtcgg agctggattt agctccttga atgttcggat ggaaatgtgt 2400 tgatcgtgtt ggggatacca ggtcgaagaa tcgcttattt gtgcatgaga atttgccttc 2460 gaactgaata agcatgtgga gatgaggttg cccatcctcg tgaagttctc tgcacacttt 2520 gatgtatttc ttgtttgtgg gagttgggat gtttaatatt tgggataatg cgtcgtgttt 2580 agatagagaa catttgggat atgtgagaaa atagtttttg gcctgtattt taaaacgctt 2640 ggggggagtc atttatgcga gagcaattgg agacacctcg gttgatgtct ctactgaatt 2700 ggagacaata tatagtgtct ccaaatggca taatggtaat taggtagatc tattttcaaa 2760 atttgaacca acagcggcca tccgtataat att 2793 //