ID HE806427; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC HE806427; XX DT 07-JAN-2013 (Rel. 115, Created) DT 12-FEB-2013 (Rel. 115, Last updated, Version 2) XX DE East African cassava mosaic Zanzibar virus complete segment DNA A, isolate DE SB1 XX KW complete genome; complete viral segment. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Akhtar S.; RT ; RL Submitted (06-MAY-2012) to the INSDC. RL Akhtar S., College of Agricultural and Marine, Sciences, Sultan Qaboos RL University, Plant Biotechnology Research Lab, P.O. Box-34, Al-Khod 123, RL OMAN. XX RN [2] RX DOI; 10.1007/s11262-012-0838-2. RA Khan A.J., Akhtar S., Al-Matrushi A.M., Fauquet C.M., Briddon R.W.; RT "Introduction of East African cassava mosaic Zanzibar virus to Oman harks RT back to Zanzibar, the capital of Oman"; RL Virus Genes 0:0(2012). XX DR MD5; b8a93b6542dbd075793d44974c219cc2. XX CC Related sequence: XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="SB1" FT /mol_type="genomic DNA" FT /country="Oman:A'Seeb" FT /isolation_source="host leaf" FT /collected_by="Abdul Rehman Mohammed Obeid Al-Matroushi" FT /collection_date="2011" FT /clone="C-1" FT /db_xref="taxon:223275" FT CDS 174..530 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:L0P0X8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:L0P0X8" FT /protein_id="CCH63249.1" FT /translation="MWDPLLNDFLETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHHKQNMGQQAHVP FT EAQDVQNVSKPRCP" FT CDS 334..1107 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:L0P1H3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:L0P1H3" FT /protein_id="CCH63250.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNPVVAPTVRVTTSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILCKFWMDENIKKQNHTNHVMFFLVRDRRPYGLSPQDFGQVFNMYDNE FT PTTATVNNDLRDRYQVLRKFYATVVGGPSGMKEQALVNRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIPIYVYDAVTN" FT CDS complement(1104..1508) FT /gene="AC3" FT /gene_synonym="REn" FT /product="replication enhancement protein" FT /db_xref="GOA:L0P2Q7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L0P2Q7" FT /protein_id="CCH63251.1" FT /translation="MDSRTGELITAPQARNGVFTWAITNPLYFAITNHDRRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLRSVDHVMYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /gene="AC2" FT /gene_synonym="TrAP" FT /product="transcriptional activator protein" FT /db_xref="GOA:L0P0Y0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L0P0Y0" FT /protein_id="CCH63252.1" FT /translation="MPPSSPSTSHCSQMPIKVQHRTAKTRAIRRRRVDLECGCSFYIHI FT NCINHGFSHRGTHHCASSKEWRFYLGNNKSPIFRNHQPRQEAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /gene="AC1" FT /gene_synonym="Rep" FT /product="replication initiation protein" FT /db_xref="GOA:L0P157" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L0P157" FT /protein_id="CCH63253.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNIPTPTNKKYIK FT VCRELHEDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGSHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFMSSSFTNVPEELEVWVSENVMGSAARPWRPTSIVIEGD FT SRTGKTLWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT HSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFVTLHEPL FT FSNAHQSPTPHSEDQGHQT" FT CDS complement(2230..2487) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V379" FT /protein_id="CCH63254.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHDQHISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2785 BP; 728 A; 552 C; 708 G; 797 T; 0 other; accggatggc cgcgcccgaa aaagaaggtg gaccccacgg tatggccgcg cctgtgaaag 60 aaagtggtcc ccgcgcacat gttcctgtca gccagtcata ttcgcgcgtg gaagtctaga 120 tatttgttgg ttgtcgttat agacttcgtc gcgaagtagt agagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cttgaaaccg ttcacggttt ccgttccatg cttgctgtta 240 aatacctgtt acatcttgaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggtgcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cctgttgttg cccccactgt ccgcgtcacc acaagcaaaa tatgggccaa caggcccatg 480 taccggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg ttaagcacac gggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgtgcaag ttctggatgg atgagaatat caagaagcaa 720 aaccatacga accatgttat gtttttcctc gtgcgagata gaaggcctta tggtctgagt 780 ccgcaagatt ttggacaagt gttcaacatg tatgacaatg aacctactac tgcaactgtg 840 aataatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagctctg gttaataggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtatg cgactctgaa aatacccatc 1080 tatgtctatg atgcagtgac gaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac ataacatgat caacagatcg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggcct cctgtcgtgg ttggtgattg cgaaatatag gggatttgtt 1440 attgcccagg taaaaacgcc attccttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt taatatggat atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttga tgggcatttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaagag 1680 actggttctt ttcttcatcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttc gtattgctgt 1800 gccagtcccg ttgggccccc atgaattctt tgaagtgctt tagatagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacacaaata attatgtggg cccaatgacc tggcccatag tgtcttccct gtacgactat 1980 caccttcaat aacaatacta gtgggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaagaagac ataaaaggag 2100 aaacataagg agctggtggc tcttgaaaaa tcctatctaa attactactt aagttatgat 2160 attgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgct gctgccttgg 2220 aacctgagtt taatgcttcg gcacatgcgt cattagcatt gtggctgccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgatgtagg 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgt gttgatcgtg 2400 ttggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaactgaa 2460 taagcatgtg gagatgaggt tgcccatcct cgtgaagttc tctgcacact ttgatgtatt 2520 tcttgtttgt gggagttggg atgtttaata tttgggataa tgcgtcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaaacgc ttggggggag 2640 tcatttatgc gagagcaatt ggagacacct cggttgatgt ctctactgaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attaggtaga tctattttca aaatttgaac 2760 caacagcggc catccgtata atatt 2785 //