ID   HE805962; SV 1; linear; genomic DNA; STD; VRL; 1488 BP.
XX
AC   HE805962;
XX
DT   28-APR-2013 (Rel. 116, Created)
DT   28-APR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Gossypium punctatum mild leaf curl virus CP gene (partial), V2 gene, C4
DE   gene and Rep gene (partial), clone 06WTG
XX
KW   .
XX
OS   Gossypium punctatum mild leaf curl virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1488
RA   Tahir M.;
RT   ;
RL   Submitted (27-APR-2012) to the INSDC.
RL   Atta-ur-Rahman School of Applied Biosciences, National University of
RL   Sciences & Technology, 44000, PAKISTAN.
XX
RN   [2]
RA   Tahir M.;
RT   "Diversity of Begomoviruses in Punjab, Pakistan";
RL   Unpublished.
XX
DR   MD5; 85f32e618784ebaa74f7823785836891.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1488
FT                   /organism="Gossypium punctatum mild leaf curl virus"
FT                   /host="Bougainvillea"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Punjab"
FT                   /isolation_source="host leaves"
FT                   /collected_by="Muhammad Tahir"
FT                   /collection_date="12-Nov-2011"
FT                   /identified_by="Muhammad Tahir"
FT                   /clone="06WTG"
FT                   /db_xref="taxon:509532"
FT   CDS             117..416
FT                   /gene="V2"
FT                   /product="pre-coat"
FT                   /db_xref="GOA:N0DX93"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:N0DX93"
FT                   /protein_id="CCH57377.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT                   ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDK"
FT   CDS             277..>444
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:N0DX92"
FT                   /db_xref="UniProtKB/TrEMBL:N0DX92"
FT                   /protein_id="CCH57378.1"
FT                   /translation="MSKRAADIVISTPASKVRRRLNFGSPYTNRVAAPIVRVTKQQAWT
FT                   NRPMYRSHASI"
FT   CDS             complement(<844..1334)
FT                   /gene="Rep"
FT                   /product="rep protein"
FT                   /function="replication initiation protein"
FT                   /db_xref="GOA:N0DX51"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:N0DX51"
FT                   /protein_id="CCH57379.1"
FT                   /translation="MPRINQFQVKAKNIFLTYPKCPIPKEQMLELLKNISCPSDKLFIR
FT                   VSQEKHQDGSLHIHALIQFKGKSQFRNPRHFDVTHPNTSTQFHPNFQGAKSSSDVKSYI
FT                   EKDGDYIDWGQFQVDGRSARGGQQTANDAAAEALNAGSAEAALAIIREKLPKDYIFQYH
FT                   "
FT   CDS             complement(920..1177)
FT                   /gene="C4"
FT                   /product="C4 protein"
FT                   /function="symptoms determination"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:N0DX53"
FT                   /protein_id="CCH57380.1"
FT                   /translation="MGACISMPSSSSKVNPNSETPDISMSLTLIPPPNSIQISRELSPA
FT                   PMSNPTSRRTVITSTGVSFRSMEDLLEEVNRQLTMQQQRP"
XX
SQ   Sequence 1488 BP; 373 A; 330 C; 349 G; 436 T; 0 other;
     accggatggc cgcgcgattt ttttttgtgg gcccccccac gtggaattgc tccctcaaag        60
     ctaaataacg ctgtcgcgca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt       120
     gggatccact gttaaacgaa ttccctgata cggtgcacgg gtttcggtgt atgctttctg       180
     tcaaatattt gcaacttttg tcgcaggatt attcaccgga taccctaggt tacgagttaa       240
     tacgggattt aatctgtatt ctacgttccc gtaattatgt cgaagcgagc tgcagatatc       300
     gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag cccatacacc       360
     aaccgtgttg ctgcccccat tgtccgcgtc acaaaacaac aggcatggac aaataggccc       420
     atgtaccgaa gccacgcgtc aatctagagc atcgcgagtc gcccggttct aggggcggat       480
     aattttacgt ccctttatag aagctcccga tttgtgtact gcatccctgg cccccagatc       540
     tttaaaggtt gagaaatggg tgagcctatg aacgtttaac cggggtcgtt cttgaacttg       600
     gacccaggtc cagtgtccac ataatagtta gtggccccag gaattagccc cattgttctc       660
     cccggtggac tatctcctca aattaataac tccggagttt aagggcccgc cagcggcatc       720
     gacaacgtta tcggtggccc aaacttcaag ttcttctgga acttgatgga aggagaatga       780
     gaaaaaggag aaacataaac cttttacagg aggtgtaaaa tcctatctaa attacacttt       840
     aaattgtgat attgaaaaat atagtctttc gggagctttt cccttataat tgctaaagct       900
     gcttcagctg aacctgcatt cagggcctct gctgctgcat cgttagctgt ctgttgacct       960
     cctctagcag atcttccatc gacctgaaac tgaccccagt cgatgtaatc accgtccttc      1020
     tcgatgtagg atttgacatc ggagctggac ttagctccct ggaaatttgg atggaattgg      1080
     gtggaggtat tagggtgagt gacatcgaaa tgtctggggt ttctgaattg ggatttacct      1140
     ttgaactgga tgagggcatg gatatgcagg ctcccatctt ggtgtttttc ttgggatact      1200
     ctgataaata atttatcaga agggcatgaa atatttttaa ggagttcgag catttgctct      1260
     tttgggattg ggcattttgg atatgtaagg aaaatatttt tggccttaac ctggaattgg      1320
     ttaatacgtg gcatattgaa ttgggtgctc ctcaaattct gaggaatgtg gggctttggg      1380
     tgcctattta tatcgagcac ccaaatggca tattctgtaa ataactagaa gttcgtttga      1440
     aattcaaatt cccctttggg ctccaaaagc ggccatccgt ataatatt                   1488
//