ID HE795109; SV 1; linear; genomic RNA; STD; VRL; 4417 BP. XX AC HE795109; XX DT 20-AUG-2012 (Rel. 113, Created) DT 05-NOV-2013 (Rel. 118, Last updated, Version 2) XX DE Simbu virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, DE isolate SA Ar 53 XX KW . XX OS Orthobunyavirus simbuense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-4417 RA Hoeper D.; RT ; RL Submitted (19-MAR-2012) to the INSDC. RL Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health, RL Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems RL 17493, GERMANY. XX RN [2] RX DOI; 10.3201/eid1810.120835. RX PUBMED; 23017842. RA Goller K.V., Hoper D., Schirrmeier H., Mettenleiter T.C., Beer M.; RT "Schmallenberg virus as possible ancestor of Shamonda virus"; RL Emerg. Infect. Dis. 18(10):1644-1646(2012). XX DR MD5; a5d2f79b78f5f980ca15609c63562dd8. XX CC related sequences HE795108, HE795110. XX FH Key Location/Qualifiers FH FT source 1..4417 FT /organism="Orthobunyavirus simbuense" FT /segment="M" FT /isolate="SA Ar 53" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052441" FT CDS 14..4243 FT /gene="Gn-Gc-NSm" FT /product="M polyprotein" FT /db_xref="GOA:J4FCT9" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR005168" FT /db_xref="InterPro:IPR026400" FT /db_xref="UniProtKB/TrEMBL:J4FCT9" FT /protein_id="CCG93496.1" FT /translation="MPSYVGFTILLCATIVASLPLREGTTGSRCFSNGDLVKTINTSTV FT VSEVCLKDDISLIKSIGEHYKVGNQLAAVLKYFRLYQVKDWHTCNPILDEHGTFMIMNV FT QEDGLLMPKMHTCRVECDISVNKETGEIVLHSYRLNHYRIAGTIQQAGWFKNKIEIPLE FT NTCENIEITCGLKTMNVHACFRQHKSCTRYFKGSLMPELMIESICTNIELILLTTFILV FT SSIIMMILTKTYIVYILIPLFYPFVKVYGIIYNKYFKLCKKCLLAVHPFSDCPTTCICG FT MVYNNTESLKLHRLCSNCTGYRALTKSRRLCKSKGWNIFLCICFGLIFFSFITPVQSEC FT FKFEDLTQEFKSCLSENAQIKERESNNIKTIIAVLVILLTLMAFKIPIVNVYQMITITK FT CKFCGMLHYKKNLKVGEGYTNKCLFCICSEDKGLVAHTARESCKYYSTKNIDKVFTILL FT IVILVILIKPIYGTSTDCREFRVDEPTIEQISKCLAIYQNKTSSDRKEQVIESLKQYAT FT KEEIESLNIPDDYEELNTKIEQFTVLEGKIFLEYYKSQTLSEDVNGIKILNDPQNIKWK FT MYIKHRTMNLCMPHSYKYICRCIHSFKYCSSTATDHESEITTYYRDKAAEYTHDLNLLL FT DAIKYAVPGLGASILDQIKKDKDYDNIPHITGKLQVYAKNNIHLLGILKFIDHMRSLSV FT TGLQKGSARLKTIKSISSEPVLRANTVGESPITSCYQAKKATCVSPKGVGTPNQYLLCQ FT SKLYLWPMDGVYVSNRNPSEHCADDTHCHIPINPPKDDISKKVCREHNIETNTDIYSKS FT VTECSVEKFGTCNVKSVTWQIAVCNGVYYYTSARQHAKGHDITSYCLTASCTEARYPFR FT KRLCTQTVWDTTYRDKVHIKKLSHTNIENYIAAIQSELSNDLSTHSYRPLKNLPKVIPT FT YKSISIQGDESKTGVRNAFVKSSLPAITGVSTGLNVKFKDGSELFSLVVFVKKIIVKAT FT YRHIYTTGPTVGINTKHNEICTGTCPKTIPGEKNWLTFSKEHTSNWGCEEWGCLAIGAG FT CLYGSCQDILKPELRVYKKVGTETREVEVCITMPHETFCNLVDVLQPLISERVQISLET FT VDVKQLPTLIGIKNGKVLVGDINDLGNTAKKCGSVQITSDSVIGSGTPKFDYICHAAQR FT KDVIVRRCYDNAYDSCRFLQEDPNYNIAQGTATELHLKTANIGQIDFKVMLGDFDYDVV FT SRDSTVIINSIKCAGCSDCVEEMACALNIQAESSTTCKVTSNCELYMDRIILDPAVNDY FT SLKLSCKKDIKIIKVAVCKSASETIPILKQSSVKLDLTSLDESAYIQEHDKKCGTWLCR FT VKEEGLSIIFEPIFGKISYYWKIFIAVTSAIIGLLALVYICFPVCKRLKGLLEQNERIY FT QMETKFK" XX SQ Sequence 4417 BP; 1606 A; 695 C; 820 G; 1296 T; 0 other; taccacaaat aacatgcctt cttacgttgg atttacaatt ctcttgtgtg ccacaattgt 60 ggcctcatta ccattaagag aagggactac tggaagtaga tgcttctcga atggtgactt 120 agttaaaacc atcaacactt ccacggtagt atcggaggtt tgcttaaaag atgacatatc 180 attaattaaa tctattggtg aacattataa agttggcaat caattggcag cagtactgaa 240 atactttaga ctttatcaag ttaaagattg gcatacctgt aatcccatat tagatgagca 300 tggtacattc atgattatga atgtacagga agatggcctt cttatgccta agatgcatac 360 atgtagggtt gagtgtgata tttcagtcaa taaggaaaca ggggagattg ttttacattc 420 atatagactc aaccactacc gtattgctgg cacaatccag caggctggct ggtttaaaaa 480 caaaatagaa ataccattag aaaatacatg cgaaaatata gaaataacat gtgggcttaa 540 aaccatgaat gtccatgcat gctttagaca acataaatct tgtacaaggt attttaaagg 600 ctctttaatg ccagaactaa tgatagaatc tatttgcaca aatatagaac taatactatt 660 aaccacattt atattggtct ctagtataat tatgatgata ctaacaaaaa cttatattgt 720 ttatatacta ataccattat tttacccgtt tgtaaaagta tatgggatca tatataataa 780 atactttaaa ttatgtaaaa aatgccttct tgctgtgcat ccattttctg attgtccaac 840 aacttgtatt tgtggaatgg tttacaataa cactgagtcg ctaaaactac acaggttatg 900 ttctaactgt acaggatata gggcattaac aaaatctaga aggttatgca aaagcaaagg 960 ctggaatatc tttttatgca tatgttttgg gttaatattc ttctccttta taacaccagt 1020 gcagtctgag tgttttaaat tcgaggattt aactcaggaa ttcaaaagtt gtttgtcaga 1080 aaatgcacaa ataaaggaaa gagaatcaaa caatataaaa accattattg ctgtgcttgt 1140 aatattatta acactaatgg catttaagat tcctattgtt aatgtttatc aaatgattac 1200 cattacaaag tgtaaatttt gtggaatgct tcattataag aaaaacctta aagtagggga 1260 aggttatact aacaagtgcc ttttttgtat ttgctctgaa gacaagggct tggttgctca 1320 tactgcaaga gaaagctgta aatactatag tactaaaaat attgataaag tatttacaat 1380 tttgctgata gttatactag tgattttaat taaaccaata tacggaacat ctacagactg 1440 tagagaattt agagttgatg aacctacaat agaacaaatc tcaaaatgtt tagctatata 1500 ccaaaataaa acaagtagtg atagaaaaga gcaggtaatt gaatcattaa aacagtatgc 1560 tacaaaagag gagattgaga gtttaaatat cccagatgat tatgaagagc tgaatactaa 1620 gatagaacaa tttacagttt tagaaggaaa aatcttctta gaatactata agtctcaaac 1680 gttatcagaa gatgtaaacg gaattaagat tttaaacgac ccccagaaca ttaaatggaa 1740 gatgtacata aaacatagga caatgaacct gtgtatgcca cactcatata agtacatatg 1800 tagatgcata cattcattta agtattgttc tagcacagca actgatcatg agagtgaaat 1860 aaccacttac tatagagata aagcagctga atatacgcat gatttgaacc tattgttgga 1920 tgcaataaag tatgctgttc caggcctagg tgcttcaata ctagatcaaa tcaaaaaaga 1980 taaggactat gataatatcc cacacataac tggcaaattg caggtctatg caaaaaataa 2040 tattcatttg ttaggaatcc taaaatttat agaccatatg agaagtttaa gtgttactgg 2100 tcttcagaaa ggttcagcaa gattaaaaac aattaagtca atatcttctg aaccggtact 2160 aagagcaaat actgtaggag aaagtcctat cacatcatgc taccaagcaa aaaaagcaac 2220 atgtgtctcg cccaagggtg tggggacacc aaatcaatac ctattgtgcc agagtaaatt 2280 atatttatgg cctatggatg gagtttatgt gagcaatcgg aatccttctg aacattgcgc 2340 tgatgacacc cattgccata taccaataaa tccaccaaaa gatgatattt caaagaaagt 2400 ttgtagggaa cataatatag aaactaatac agacatttac tctaaatcag tgacagagtg 2460 ttcagttgaa aaatttggaa catgcaatgt taaaagtgta acatggcaaa tagcagtgtg 2520 caatggtgtc tactactata caagtgccag gcagcatgct aagggtcatg atataacatc 2580 ctactgttta acagcaagct gcactgaagc tagatatcca tttaggaaaa gactttgtac 2640 tcaaacggta tgggacacaa cttataggga taaagtacat ataaagaaac tatcccacac 2700 taacatagaa aattatattg ctgcaataca atcagaacta tctaatgacc tctcaacaca 2760 ttcgtataga ccattaaaaa acctccctaa ggttataccc acatataaat ctatatccat 2820 acaaggtgat gaatcaaaaa caggtgtcag aaatgcattt gtaaagtcaa gtctgcctgc 2880 aataacaggg gtatcaacgg gattaaatgt aaaatttaaa gacggatcag aattgttttc 2940 tttagtggtt tttgttaaaa aaataatagt taaagcaaca tataggcata tttatacaac 3000 aggtccaaca gtagggatca atactaagca caatgagatt tgtactggta catgcccgaa 3060 aacaattcct ggagaaaaga attggttaac attctcaaaa gaacacacta gcaattgggg 3120 ttgtgaagag tggggttgct tagcaattgg ggcaggctgc ctatatggct catgtcaaga 3180 tatattaaaa cctgaattaa gagtgtataa aaaggttggg actgagactc gcgaagtaga 3240 agtttgtatc acaatgcctc atgaaacatt ctgtaatcta gttgatgtgc ttcaaccatt 3300 aattagtgag agagttcaga tctctctaga gactgtagat gtcaaacagt tgccaacatt 3360 aataggaata aaaaatggga aagtattagt tggcgatatt aatgatttgg gtaatacagc 3420 aaaaaagtgc gggtctgttc aaataacatc agatagtgtt attggttctg gaacaccgaa 3480 atttgactat atttgccatg ctgcacagag aaaagatgtt atagtgaggc gatgctatga 3540 caatgcatat gattcatgca ggtttctcca agaagatcca aattacaata tagctcaagg 3600 gacagccact gaattgcatc tgaagactgc aaatataggt caaattgatt ttaaagttat 3660 gcttggagat ttcgattacg atgttgtctc tagagattca acagtcatta taaattctat 3720 taaatgtgca gggtgctcag attgtgttga agaaatggca tgcgcattaa atatacaagc 3780 agaatcttct accacatgca aggtaacatc aaattgtgaa ttatatatgg acaggatcat 3840 tttagaccca gctgtgaatg attacagcct taaactctca tgcaaaaaag atataaaaat 3900 aataaaagtt gcagtctgca aatctgcctc agaaacaata ccaatcctaa agcagagtag 3960 cgttaagcta gatctaacta gtttagatga gtctgcatac atccaggagc atgacaaaaa 4020 gtgtggaaca tggttatgta gggtaaagga ggaaggactg tcaataatct tcgagcccat 4080 ttttgggaaa attagctatt attggaagat ttttatagca gtaacttctg cgatcattgg 4140 attgcttgca ctagtatata tctgtttccc agtttgcaag aggttaaaag ggctactcga 4200 acagaacgag agaatatacc agatggaaac aaaattcaaa taatctgagg aaaataaaca 4260 ttggtttata ttaattagtt gcttgattta atttccaatt atcatgttaa taaattcatt 4320 ccaaaattta tttcaaaatt aggggctttg cctcaagttt gctgctaaga agttgctata 4380 tgtggtagca cactactcgt cgcggcgtag cgtccgc 4417 //