ID HE795108; SV 1; linear; genomic RNA; STD; VRL; 6895 BP. XX AC HE795108; XX DT 20-AUG-2012 (Rel. 113, Created) DT 05-NOV-2013 (Rel. 118, Last updated, Version 2) XX DE Simbu virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic DE RNA, isolate SA Ar 53 XX KW . XX OS Orthobunyavirus simbuense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus. XX RN [1] RP 1-6895 RA Hoeper D.; RT ; RL Submitted (19-MAR-2012) to the INSDC. RL Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health, RL Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems RL 17493, GERMANY. XX RN [2] RX DOI; 10.3201/eid1810.120835. RX PUBMED; 23017842. RA Goller K.V., Hoper D., Schirrmeier H., Mettenleiter T.C., Beer M.; RT "Schmallenberg virus as possible ancestor of Shamonda virus"; RL Emerg. Infect. Dis. 18(10):1644-1646(2012). XX DR MD5; c4979f3137ff62b3e0f6bc8c5ae46ed0. XX CC related sequences HE795108, HE795109. XX FH Key Location/Qualifiers FH FT source 1..6895 FT /organism="Orthobunyavirus simbuense" FT /segment="L" FT /isolate="SA Ar 53" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052441" FT CDS 22..6783 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:J4F071" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:J4F071" FT /protein_id="CCG93495.1" FT /translation="MDRPTINAFRDRINACNDPEDAKDIMSALLMARHDYFGKEVCYFL FT DIEYRSDVPASDIVAEVAPPGVTIHVRHCTPDNYMIIDDKLFIIDYKVSVESAYGDLAK FT KKYEEIFHDALDEYGIDFEVVIIRADPVRDIIHVDSEDFLNRVGAIHIILDFTWFYNLR FT ALIYDKFKDNERFLEIVTQGEFTMTSPWIEEGTPELYNHPIFIEFYNSLDEKAKIVFQE FT SIHFDATQGDKWNQNLVKTMNLYRQDYNSFVKIASTSVFKCTGNYPKPDHDEITEGWDL FT MVQRVSVERQITQDISKQKPSFHMIWSPPNDGSNENIKKILKLSSLLQKVSGESTYIGS FT FRAIGRLMDFSENVGLYESHVSKLKNMSRQTSKKIDKKLDEIKIGTSTILWEQQFKFDS FT NVIDTKDKTHLFKDFLGIGGHKQFNKKSIDDVDLSKPTILDFNDKNTIDKCKFQYKQVQ FT SILSQENDRTKLGCYLEEYGHKISSCSADMWSLICKVCKMQFWSAVNDYSTLMKNMLAV FT SQYNRHNTFRVVTCANNSLFGIVMPSSDIKTKRATLVYFIIAIHDEPEDIVHHGALHGT FT FKSGSKFVSISKGMRLDKERCQRIVASPGLFLMTVCLMANNNPTIDLSEVCNFAFHTSL FT SITKAMLSLTEPSRYMIMNSLAISSHVKDYMAEKFSPYTKTSFSVVMANIIKKACYNAN FT TQKDRIQLKNIHLTDYEITQKGVSSTRELLSIWFKGYVNLKEYINQIYMPFYFNSKGLH FT EKHHVMIDLAKTVLEIEKDQRENIPGIWSSVPKKQTANLPVLIYSVAKNLAMDTSRHNY FT IRSRIENANNLKRPITTISTFTSSKSCIKRGDFAEFKAKVSKKTANSLAKSIQKYVVAN FT PEFADLEIENGQIRHAQYEDVVKAVPNYIDVMSTKVFDRLYELISCGSIDNKPTIHHIL FT QIMKDHTEFIFTFFNKGQKTAKDREIFVGEFEAKMCLYLVERISKERCKLNPEEMISEP FT GDGKLKKLEELAESEIRYTAQTLKIMKEKKISEMFGGQIDIDYRPHSLKIEINADMSKW FT SAQDVLFKYFWLFTLDPALYRHEKERILYFLCNYMQKKLILPDELVQTILDQRGHRDND FT LIFEMTNGLSQNWVEIKRNWLQGNLNYTSSYLHSCCMNVYKDVIKSASELLEGESLINS FT MVHSDDNHTSIVIIQDKLPDDTIIEFCIKLFEKICLTFGNQANMKKTYITNFIKEFVSL FT FNIYGEPFSVYGRFLLTAVGDCAYLGPYEDAASRLSATQTAIKHGCPGSLAWISIALNQ FT WITHTTYNMLPGQNNDPCNVFPTYNRQEIPIELCGLINADLSTIAIAGLESGNLEYLVG FT LSKRMSSIELQREPIQSQYNKIEEWNIDSLTPMDRIKLKLLRFMTLDSSMSSDDGMGET FT SDMRSRSLLTPRKFTTNASLIRLKSYNDYQQILQDKDKLDQLFEYFVQNPQLLVTKGET FT VEEFCQSIRFRYSSRKFKESLSIQNPAQLFIEQILFANKPMIDYTTIHDKLFGIQDDPN FT IENATAIIGKKTFPETYKQILLDLERFELTVDDVKTVFSYCLMNDPILIACANNILISV FT RGMEIDRTAMTCSTMPEIKSLKVIYHTPALVLRAYVQDNIHLKGVEPDEMRRDLHHLEQ FT FIEQTKLREHMRQRIQKNEIKTMGRDLKFEIRELTKFYQICYDYVKSTEHKVKIFILPR FT RNYTPLEFCGAVTGNLLKDDKWVTIYYLKQITLPSKKAQIASSIDLEVQTGFEAMRLIA FT HFADSFLSDNSRITFLKRMISDYTYKGVKVELLYRKLCSSRFRTKILPILFYMGDLSQS FT DIDRFDAEKAEEQITWNNWQTSREFTTGPIDLSIKGYSRSIRIVGNDNELTAAELNIPK FT IRGDVITRHGQALLNKPHGLKFENMKPVDELNPKLYYICYQLRAKKRYYYNILSVSTIL FT EHNDRIDETRIRKNNKWVPVCPVAIGKFSQSEKPLIDKIKYLNMEEIKLTKLQIAVDDH FT AMIRKAPMQKMSFFEGPPIPSGGIDVSKLMQSQVMINLNMDTLSNISLLDLCRIFSCKG FT ETTDQDAFEFLSDEIIDEDITEELDSSPALKVTYTRKSDKNNTYKNAIIRCLIRESDKF FT ESCFDISDEGFTSDSNLEILECLVWILELLKTNQWSTELISCIHMCLYRNNLDQLFHNF FT TAPESFVSDAIIQKPLWTEIIDFLQILQATNYKLEPWVSIMKHSISKAIEYAKKKYDEE FT NQLNPKNLRKFIKGKKMGGKSKFEF" XX SQ Sequence 6895 BP; 2571 A; 1075 C; 1252 G; 1997 T; 0 other; agcccctaat ataacaattc aatggataga ccaacaataa atgcatttag ggatcgcatt 60 aatgcatgca atgatcctga agatgcaaaa gatattatgt ctgccctact tatggcaaga 120 catgactatt ttggcaaaga ggtttgctat ttcttagaca ttgaatatag atcagatgtt 180 cctgctagtg acattgttgc agaagttgct cctccaggag tgactatcca tgttaggcat 240 tgcactccag acaactatat gattatagat gacaaattgt ttataataga ttataaagta 300 tctgttgaaa gtgcttatgg agatctagca aagaagaaat acgaagagat attccatgat 360 gcattagatg aatacggaat tgactttgaa gtagtgatta ttcgtgcaga tccagtgaga 420 gacataatac atgttgattc agaagatttt ttgaacagag ttggtgcaat acatattatc 480 cttgacttca cttggtttta caatcttagg gccttaattt atgacaaatt taaggacaat 540 gaaaggttct tagaaattgt aacccagggt gaattcacaa tgacatctcc ttggatagaa 600 gaagggaccc ctgaactata taaccatccg atatttatag aattctataa ttcgttagat 660 gaaaaagcta aaattgtctt ccaggagtca atacactttg atgctacaca aggtgataag 720 tggaatcaaa atttagttaa gacaatgaat ctttatcgcc aagattacaa ttcctttgtc 780 aaaatagcat ctacgagtgt ctttaagtgt actggaaatt atcctaagcc tgatcatgat 840 gaaattacag aaggttggga tttgatggtt caaagagtgt ctgtagaaag gcagattacc 900 caggatattt caaagcagaa accatcattt catatgatat ggagcccgcc taatgatggt 960 tctaatgaga acattaagaa aattcttaaa ttatcatcgt tattgcagaa ggtttctgga 1020 gaatctacat acataggatc atttagagct ataggcaggc tgatggattt ttctgaaaat 1080 gtaggactgt atgagagtca tgtgagcaaa cttaaaaata tgtcaagaca aacatctaag 1140 aaaattgata aaaaacttga tgaaataaaa ataggtacat ccactattct atgggaacag 1200 caatttaaat ttgattcgaa tgtcattgat actaaggaca agacacattt atttaaagat 1260 tttctaggga taggtggcca taaacaattc aacaaaaaga gtattgatga tgtagatctt 1320 tcaaaaccaa ctattcttga ttttaacgat aaaaacacta ttgataaatg taaattccag 1380 tacaaacaag tgcaatcaat attatcgcaa gagaatgacc gtacaaaatt aggctgttac 1440 ctagaggaat acggacataa aatctcaagt tgttctgctg atatgtggtc attaatttgt 1500 aaggtttgta aaatgcaatt ttggtctgct gtcaatgatt actcaacatt aatgaaaaat 1560 atgcttgctg tctcacaata taataggcac aacactttta gagttgtcac atgtgcaaat 1620 aacagcctgt ttgggatagt tatgccgtcc tcagatataa aaacaaagag agcaacactt 1680 gtatatttca tcattgcaat acatgatgaa cctgaagata tagtgcatca tggagcactc 1740 catgggacat ttaaatctgg gtctaagttt gttagcatct caaaagggat gaggctggac 1800 aaagagagat gccaaagaat tgtggctagc cctggattat tcttgatgac agtctgcttg 1860 atggccaaca ataatcctac aatcgatttg agtgaggtct gcaattttgc attccataca 1920 tctttatcaa taaccaaggc tatgttatct ctgacagagc catcaaggta catgatcatg 1980 aattctttag ctatatctag ccatgtaaaa gattatatgg ctgagaagtt ttcaccatac 2040 accaaaacaa gtttctctgt tgttatggca aacataataa agaaggcctg ctataatgca 2100 aacacccaga aagaccgcat acaattgaaa aacatacatt tgacagatta tgagataact 2160 caaaaaggtg tctcatcaac tagagaatta ctatccattt ggtttaaagg atatgtcaat 2220 ttaaaggagt atataaacca gatatacatg ccattttatt ttaattcaaa aggtttacat 2280 gaaaagcatc atgtgatgat agatttggct aaaacagtct tagagataga aaaagaccag 2340 agggaaaata taccaggcat atggtcgtca gttccaaaaa aacaaactgc aaatctgccg 2400 gttcttattt attcagtagc aaaaaatcta gccatggata catccagaca caattacatc 2460 agatcaagga ttgaaaatgc gaataatctt aaaaggccaa taacgacaat ctcaacattt 2520 acaagttcaa agtcttgtat aaaaagaggt gattttgcag aatttaaagc aaaagtttct 2580 aaaaaaacag ccaattcatt agctaagtct attcaaaaat atgttgtagc aaacccagaa 2640 tttgcagatt tagaaataga gaatggtcaa atcagacatg cacagtatga agatgttgtc 2700 aaagctgttc caaattatat cgatgttatg tcaactaaag tatttgatag actgtatgaa 2760 cttatcagtt gtgggtctat agacaataag ccaacaatac atcatatact acaaataatg 2820 aaagatcaca cagaatttat atttactttc tttaacaaag ggcagaaaac tgccaaagat 2880 agagaaatat ttgttggaga atttgaagct aagatgtgtt tatatctcgt cgagagaatt 2940 tctaaagaaa gatgtaaact caatccagaa gaaatgatca gtgagcctgg agatggaaaa 3000 ctaaaaaagc tggaagaatt agctgagtct gaaattagat atacagcaca gacattgaag 3060 attatgaagg aaaagaaaat atctgaaatg tttggaggcc aaatagacat tgattatagg 3120 ccacattcac ttaaaataga aataaatgca gacatgtcaa aatggagtgc acaagatgta 3180 ttatttaaat acttttggct atttacatta gacccagcat tatatagaca tgagaaagag 3240 cgtatattat attttctatg taactacatg cagaagaagc tgatactacc agatgaatta 3300 gttcaaacaa tactagacca gagagggcac agagataatg atttgatttt tgaaatgacc 3360 aatggattgt cacagaactg ggtagaaatc aagagaaact ggcttcaagg caatctcaac 3420 tacacaagta gttatttaca ttcatgctgc atgaatgtat ataaagatgt tattaaatca 3480 gcaagtgaac tgctagaagg ggaatcatta atcaattcta tggtccactc agatgataac 3540 cacacctcaa tagtgataat acaagataaa ctgcctgatg atactattat agaattttgc 3600 attaaattat ttgagaaaat ttgcttaact tttggtaatc aagcaaatat gaagaaaaca 3660 tatataacca attttattaa agaatttgtt tcattgttta atatatatgg tgaacccttt 3720 tcagtgtatg gcagattttt actaactgca gttggagatt gtgcatattt aggcccctat 3780 gaagatgctg caagtaggtt atctgccact caaactgcca taaaacatgg ttgtcctgga 3840 tcattggcat ggatttctat tgcactcaat caatggataa ctcatacaac ttacaatatg 3900 ctcccaggtc aaaacaatga cccatgtaat gtgttcccaa catacaatag acaagagata 3960 cctatagaat tgtgtggctt aattaatgca gacctatcaa ctatagcaat tgcaggtttg 4020 gaatcaggta atttggaata cttagttggg ttatctaaaa ggatgtcatc aatagaactt 4080 cagagagaac ctatccaatc acaatataat aaaatagaag aatggaatat tgattcactg 4140 acaccaatgg accgaataaa gttaaaatta ttgagattta tgactttaga ctcttcaatg 4200 tcttcagacg acgggatggg tgaaactagt gacatgaggt caagatcatt actaactcca 4260 aggaagttta caacaaatgc ctcattgatt agattaaaat cttataatga ctaccagcaa 4320 atattacaag acaaggataa attagaccag ctcttcgaat attttgtaca aaatcctcaa 4380 ttgctagtta caaaaggaga aactgttgaa gaattttgtc agtcaataag gtttagatat 4440 agcagtagaa aatttaaaga gtcattatca attcaaaacc ctgcacaact atttatagaa 4500 caaatattat ttgcaaataa gcccatgatt gattatacaa ccatccatga taagctattc 4560 ggtatacaag atgatccaaa catagaaaat gctacagcaa taatagggaa aaagactttc 4620 cctgagacat acaagcagat tcttcttgat cttgagagat tcgaattaac agtagatgat 4680 gttaaaacag ttttcagtta ctgtcttatg aatgacccta tacttattgc atgtgcaaat 4740 aacatcttaa tatctgtacg aggtatggaa attgatagaa ctgcaatgac gtgctccact 4800 atgcctgaga tcaaaagtct caaagttatt tatcacacac cagcattagt attaagagct 4860 tatgtacaag ataatataca ccttaaagga gttgaacctg atgagatgcg ccgagactta 4920 caccacttag aacaattcat tgagcaaact aaattaagag aacacatgcg ccaacggata 4980 caaaaaaacg agataaagac aatggggaga gacttaaaat tcgaaattag agagctaaca 5040 aaattttacc aaatatgtta cgattatgta aagtctactg aacacaaagt aaaaatattt 5100 atattaccta gaaggaatta taccccattg gaattctgtg gagcagtaac aggaaatttg 5160 ctaaaagatg acaagtgggt cactatctat tatttaaagc agataacact cccgtcaaaa 5220 aaagcgcaaa tagcttctag tatagactta gaggtccaaa ctggattcga agcaatgaga 5280 ttaattgctc attttgcaga ctcatttcta agcgacaatt ctagaattac attccttaag 5340 aggatgattt cagattacac ttacaaaggt gtgaaagttg aattgttata tagaaaatta 5400 tgttcttctc ggtttagaac aaagatattg ccaatactat tttatatggg tgatttatct 5460 caaagtgata tagataggtt tgatgcagaa aaagcagaag agcagataac ctggaataat 5520 tggcaaacat ctagagaatt cacaacaggg cctatagatc tttcaattaa gggctatagt 5580 agaagtatac gaattgttgg aaatgataat gaactaactg ctgcagaact aaatatccca 5640 aaaattagag gcgatgttat aactagacac ggtcaggctt tacttaacaa gcctcatggc 5700 cttaaatttg aaaatatgaa acctgtagat gaattgaatc caaagctgta ttatatatgt 5760 taccagctta gggcaaaaaa acgatattat tacaatatac tctcagtttc tactatattg 5820 gagcataatg ataggataga tgagactagg atacgaaaga ataacaaatg ggttccagtt 5880 tgcccagttg ctattgggaa atttagtcaa tctgaaaaac cattgattga caagatcaaa 5940 tatttaaata tggaggaaat caagctgaca aaattacaaa tcgctgtaga tgaccatgcg 6000 atgatcagga aagcccctat gcagaaaatg tcattctttg agggccctcc aatcccatca 6060 ggtggaatag atgtgagtaa gttaatgcaa tctcaagtta tgataaatct aaatatggat 6120 acattatcaa atatatcact cttggactta tgcagaattt tcagttgcaa aggtgagaca 6180 acagaccaag atgcctttga atttctatca gatgaaataa ttgatgaaga tataacagag 6240 gaattagata gctcacctgc tttaaaagtc acctatacaa ggaaatcaga taaaaataat 6300 acctataaaa atgcaataat aagatgcctg ataagagagt cagataagtt tgaatcttgt 6360 tttgatatat cagatgaggg atttacctct gattctaatt tagagatttt agaatgttta 6420 gtctggatat tagaattact taaaacaaat caatggtcta ctgagttgat tagctgcatc 6480 cacatgtgtc tatataggaa caatttagac caactatttc acaactttac tgccccagag 6540 tcttttgtat cagatgctat aatccaaaaa ccactgtgga ctgaaattat tgatttccta 6600 caaatattgc aggcaacaaa ttataaactg gaaccatggg tatcaattat gaagcattct 6660 ataagcaagg ctatagaata tgcaaagaag aaatatgatg aggaaaacca gctgaatcct 6720 aagaatttaa ggaaatttat taagggcaaa aagatgggag gaaaatcaaa gtttgaattt 6780 taaatctatc acagtgtgcc cctgctctgt aaatatattt taagtaaaat tgtatatatt 6840 aggggcacac tactctgccg gcgtagggta ggcacacgct gagccagtca gtgta 6895 //