ID   HE795107; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   HE795107;
XX
DT   20-AUG-2012 (Rel. 113, Created)
DT   05-NOV-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Shamonda virus N and NSs genes, segment S, genomic RNA, isolate Ib An 5550
XX
KW   .
XX
OS   Shamonda orthobunyavirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Peribunyaviridae; Orthobunyavirus.
XX
RN   [1]
RP   1-927
RA   Hoeper D.;
RT   ;
RL   Submitted (19-MAR-2012) to the INSDC.
RL   Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health,
RL   Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems
RL   17493, GERMANY.
XX
RN   [2]
RX   DOI; 10.3201/eid1810.120835.
RX   PUBMED; 23017842.
RA   Goller K.V., Hoper D., Schirrmeier H., Mettenleiter T.C., Beer M.;
RT   "Schmallenberg virus as possible ancestor of Shamonda virus";
RL   Emerg. Infect. Dis. 18(10):1644-1646(2012).
XX
DR   MD5; 399345d7de6f1484d9139708eeafed30.
DR   EuropePMC; PMC4507351; 26186514.
XX
CC   related sequences HE795105, HE795106.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..927
FT                   /organism="Shamonda orthobunyavirus"
FT                   /segment="S"
FT                   /isolate="Ib An 5550"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:159150"
FT   CDS             31..732
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q1MXB4"
FT                   /db_xref="InterPro:IPR001784"
FT                   /db_xref="UniProtKB/TrEMBL:Q1MXB4"
FT                   /protein_id="CCG93493.1"
FT                   /translation="MSSQFIFEDVPQRNAATFNPEVGYVAFIGKYGQQLNFGVARVFFL
FT                   NQKKAKMVLHKTAQPSVDLTFGGVKFTVVNNHFPQYVSNPVPDNAITLHRMSGYLARWI
FT                   ADTCKASVLKLAEASAQIVMPLAEVKGCTWADGYTMYLGFAPGAEMFLDAFDFYPLVIE
FT                   MHRVLKDNMDVNFMKKVLRQRYGTMTAEEWMTQKITEIKAAFNSVGQLAWAKSGFSPAA
FT                   RTFLQQFGINI"
FT   CDS             56..331
FT                   /gene="NSs"
FT                   /product="non-structural protein"
FT                   /db_xref="GOA:J4GMU9"
FT                   /db_xref="InterPro:IPR000797"
FT                   /db_xref="UniProtKB/TrEMBL:J4GMU9"
FT                   /protein_id="CCG93494.1"
FT                   /translation="MYHNGMQLHLTRRSGMWHLLVSMGNNSISVLLESSSSTRRRPKWS
FT                   YIRRHNQVSILLLVGSNSQWLITIFPNMSQILCQTMPLHFTGCQDI"
XX
SQ   Sequence 927 BP; 253 A; 206 C; 202 G; 266 T; 0 other;
     agtagtgaat ccactattaa ctacagaaat atgtcaagcc aattcatttt tgaagatgta        60
     ccacaacgga atgcagctac atttaacccg gaggtcgggt atgtggcatt tattggtaag       120
     tatgggcaac aactcaattt cggtgttgct agagtcttct tcctcaacca gaagaaggcc       180
     aaaatggtcc tacataagac ggcacaacca agtgtcgatc ttacttttgg tggggtcaaa       240
     ttcacagtgg ttaataacca ttttccccaa tatgtctcaa atcctgtgcc agacaatgcc       300
     attacacttc acaggatgtc aggatatcta gcacgctgga ttgctgatac atgcaaggct       360
     agtgtcctca aactagctga agctagtgct cagattgtca tgccccttgc tgaggttaag       420
     ggatgtacct gggctgatgg ttatacaatg tatcttggat ttgcacctgg ggccgaaatg       480
     ttccttgatg cttttgattt ttatccgcta gttatcgaaa tgcatagggt ccttaaggac       540
     aatatggatg tgaattttat gaaaaaagtc ctccgccaac gctatggaac aatgactgct       600
     gaagaatgga tgactcagaa aataacagaa ataaaggctg ctttcaattc tgttggacag       660
     cttgcctggg ctaaatctgg attctctcct gctgctagaa ctttcttgca gcaattcggt       720
     atcaacatct aaacctcttc atcacagatc ttcaatttcc gtgcaatatg tctatgtatt       780
     gcacaccatt atactgcaag gcttctgtta agatagttaa taagtggaga acactactgc       840
     ccaggcatag ttcaccatct ttcgggtcct aacgcatgcg ctcgtgctcc acctccccga       900
     cgcggtcggg tcgtagtacg ggccggt                                           927
//