ID HE795087; SV 1; linear; genomic RNA; STD; VRL; 6966 BP. XX AC HE795087; XX DT 20-AUG-2012 (Rel. 113, Created) DT 05-NOV-2013 (Rel. 118, Last updated, Version 2) XX DE Aino virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic DE RNA, isolate 38K XX KW . XX OS Aino virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus; Aino orthobunyavirus. XX RN [1] RP 1-6966 RA Hoeper D.; RT ; RL Submitted (19-MAR-2012) to the INSDC. RL Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health, RL Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems RL 17493, GERMANY. XX RN [2] RX DOI; 10.3201/eid1810.120835. RX PUBMED; 23017842. RA Goller K.V., Hoper D., Schirrmeier H., Mettenleiter T.C., Beer M.; RT "Schmallenberg virus as possible ancestor of Shamonda virus"; RL Emerg. Infect. Dis. 18(10):1644-1646(2012). XX DR MD5; f01edd93b3f8b10f01e373b6742ef4b6. DR EuropePMC; PMC3471646; 23017842. XX CC related sequences HE795088, HE795089. XX FH Key Location/Qualifiers FH FT source 1..6966 FT /organism="Aino virus" FT /segment="L" FT /isolate="38K" FT /mol_type="genomic RNA" FT /db_xref="taxon:11582" FT CDS 96..6854 FT /gene="RdRp" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:J4FBX4" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:J4FBX4" FT /protein_id="CCG93467.1" FT /translation="MDPYRIDMFRNRILASDDPEDAKDIMSDLLMERHNYFGREVCQYL FT DIEFRNDTPAQDILFDFLPPGAVFTVRNCSPDNYIIFNGKLYIIDYKVSVDASYGLSTK FT TKYEEIFGDALAPFGLDFEVVIIRADPIREMVHIDSQDFINAFGNIYIDLDFTWFFNLR FT TLLYDKFKDNDRFLEIVNQGEFTMTSPWIEENTPELYTHPIFREFYNSLNDEEKNTFNI FT SLEFDATKSEKWNHNLIAIIQKYEPFYKKFCNIAASGVFKCTGDYPAPSKDQISKGWDD FT MYERVKLERDLTDDLSKQKPSFHFIWSPPDPERPNENISKILTLAKALQKIQGDSTFIN FT SFRALGLLMDFSSNIGLYESHVSKLKNTARQTSKKIDQKLEEVEIGSATVLWEQQFKFN FT TKIMNAYDKSHLFKDFLGIGGHKSFSKKSIDDLDTEKPKILDFNSKNVQDACNRIYRQV FT KNILSNVNSLKKMGCYLEEYGYNISNASPDMWERVQEVCSTNFWAAILDYSTLMKNMLA FT ASQYNRHNTFRVVTCANNNLYGIVMPSSDIKTKRSTLCYFIIALHDKREDVAHSGSIHS FT TFQSGSKYVSISKGFRLDKERCQRIVSSPGLFLMTSCLFLSDNKSLNTNDVLNFSFHTS FT VSITKAMLSLTEPSRYMIMNSLAISSHVREYMAEKFSPYTKTAFSVVMTQIIKRACYEA FT FDQKEKIELKNIHLTDYEITQKGVKPQRDLKSIWFPGQVNLKEYINQVYMPFYFNSKGL FT HEKHHVMIDLAKTILEIEKDQRLNIPGIWSDIPKKQTVNIRVLIYSLAKTLNMDTSRHN FT YIRSRIENNNNLKRSITTISTFTSSKSCIKIGDFSEFKTVRKKMIDSMKKEINKYTVAN FT PEFAEDLDTSYAIHHADYADVRKAIPNYADCISTKVFDALYEKIKNGEIDDKPTVSHIL FT EIMKKHKQFYFSFFNKGQKTAKDREIFVGEFEAKMCLYLIERISKERCRLNPEEMISEP FT GDSKLKKLEDLAEAEIRYTAQTLKNLNRKIQKDMFGSEIDIDMKLHALKIEINADMSKW FT SAQDVLYKYFWLFVLDPVLYKYEKERILYFLCNYMQKRLILPDDLIANILDQRIQRQDD FT IIYEMSNGLTQNWVEIKRNWLQGNLNYTSSYLHTCSMNVYKDIIKRSIDLLEGETLVNS FT MVHSDDNHTSLVIVQNKLNDNILIEFSIKLFEKICLTFGNQANMKKTYLTNFIKEFVSL FT FNIYGEPFSVYGRFLLTAVGDCAYLGPYEDCASRLSATQTAIKHGCPPSLAWISIALNQ FT WITHNTYNMLPGQNNDPCNILPCYNRFEVPIELCGLLNCSLPSIAIAGLEADNLEFLVR FT TSRKLSSVMYQREPIQVQYEHILDWDISQLTEIETIRFKMLRFMALDSSMSSDDGMGET FT SDMRSRSLLTPRKFTTQASLSRLVSYNDYQQIIQDQTKIDELLGYFIQCPQLLVTKGEN FT VEEFCQSIRFRYTSRKFKESLSIQNPAQLFIEQILFANKPMIDYTSIHDKLFGIQDDPN FT ISDTTCIIGKKTFPETYNQIKCDLERFALTSDDIKTVYSYCLMNDPILIACANNIILSM FT KGMSIDRSAMTCAQMPEIKSLKVIYHSPAMVLRAYVTGDMNIRGAEPDEMRRDIYHLEE FT FIEKTNIRNKMRERINKNEIKSNGRDIKFEIKELTKYYQICYDYIKSTEHKIKIFILPK FT RPVTPSDFCSIVAGNLMLDNKWITIHHLKQITSQTKKAQIATSTDLELQLAYECFRLIA FT HFADSFLAENSRKQFLKKVVEEFSYKGVSVKNLYDKIKHSRLRSKIVPILYYMNDLDQL FT DLDRHDAEKAEEQITWNNWQTSREFQTGPIDLSIKGYGRTIRIIGNNSKLTAAELQISR FT IRDDIISRHSQALLNKNHGLKFELMEEYKDLDPKLFYICYQLRAKKRYHYNILSVPHIT FT EHNRRTQESKIRSTNYWVPVCPVAISKLIYNDKPQLALIKRLNMDSIKLTSIQVAVEDY FT AMIRKCNFAKMQFFDGPELPCGGIDISKMMKSQNVLNLQVDTLQSISLIELCRIFNCKG FT TKEDNNAFEFLSDEVLDEEIDEELDSSPVLKITYTKKSMRNNTYKNIIVKALIRECDKF FT EECFDITDEGFTSDSNLEILESLVWILKELHTNQWSTELMQCIHMALYRNEMDHLFHRF FT TIPEQFVDNPISLNYKWSNVIEFLVTLMQIDYKQEPWVSIMAHSLNKAVEYATERKIQE FT SAKENKLQKFIKGKKMGGKSKFDF" XX SQ Sequence 6966 BP; 2608 A; 1097 C; 1226 G; 2035 T; 0 other; ctgggctgca gttcctcaca gtgaagacag cgccaggtgg caagaagtca aaaggtatat 60 cttgagtagt gtacccctag agaaaacaat tcaaaatgga tccttatcgt attgatatgt 120 tccgcaacag gatccttgca tctgacgacc cagaagatgc aaaggatatc atgtcggatt 180 tgttgatgga acgccacaac tattttggta gagaagtgtg ccaatactta gacatagagt 240 ttaggaatga tacacctgct caagatatac tttttgactt cttgccacct ggcgctgtct 300 tcactgtgag gaactgcagc ccagacaact acatcatatt caatgggaag ttatatatta 360 tagattacaa agtttctgtt gatgccagtt atgggttgtc aacaaagaca aagtacgaag 420 aaatatttgg tgatgcttta gctccttttg gtttggactt tgaagttgtt ataatcaggg 480 cagatcctat tcgagaaatg gtacatattg atagtcaaga tttcatcaat gcatttggca 540 atatttatat tgacttagat ttcacatggt ttttcaattt gcgcacatta ctttatgata 600 aattcaagga caatgatcgg ttcttagaaa ttgttaatca aggcgaattc acaatgactt 660 caccatggat agaagaaaat acgccagaat tgtacactca tcctatattt agagaattct 720 ataactcatt gaatgatgaa gaaaaaaata catttaatat cagtttggaa ttcgatgcca 780 ccaagtcaga gaaatggaac cataatttga tagcgatcat ccaaaagtat gagccatttt 840 ataagaaatt ttgtaatatt gcagcatcag gcgtatttaa gtgcacaggc gattatcctg 900 cgcctagtaa agatcagatc tcaaagggct gggatgatat gtacgaaaga gttaaacttg 960 aaagagattt aaccgatgat ctgtctaaac agaaaccaag tttccatttt atatggtcgc 1020 ctcctgatcc cgaaagacca aatgagaata tctctaaaat actaacattg gctaaagcac 1080 tccaaaaaat acaaggtgat tctacattta ttaacagctt ccgggcattg ggcttactaa 1140 tggatttttc gtcaaatatt ggtttgtatg aatcacatgt tagtaaactt aaaaacacag 1200 cacgacaaac ttccaaaaag atcgatcaga aattagaaga ggtggagatt ggaagtgcaa 1260 ctgtcctgtg ggagcaacaa ttcaaattca acacaaagat aatgaatgct tatgataagt 1320 cacatctctt caaagatttc ctcggaattg gtggccataa atcatttagc aagaaatcaa 1380 tagatgattt agatacagaa aagcctaaaa tattagattt taactcgaaa aatgttcaag 1440 atgcctgcaa tagaatttat cgtcaagtca agaatatctt atcaaatgtt aattctttga 1500 aaaaaatggg gtgttatcta gaagaatacg gatacaatat atcaaatgct tccccagaca 1560 tgtgggagag agttcaagaa gtatgttcca caaacttctg ggctgcaatc ttggattatt 1620 caactctgat gaaaaatatg ttagctgcat ctcaatacaa ccgccacaac acatttagag 1680 ttgtcacttg tgcaaacaat aatctttatg gaatagttat gccttcttcg gatattaaaa 1740 caaaacgatc aactctttgc tactttataa tagctttaca tgataagaga gaagatgttg 1800 ctcattctgg ctcaatacat tcaactttcc aatcaggttc taaatatgta tcaatttcaa 1860 agggatttag gcttgacaaa gaaagatgcc aaagaattgt atcatcacca ggtttgttct 1920 tgatgacttc ttgtctattt ttatctgata acaaatcact gaacacaaat gatgttttaa 1980 attttagttt tcacacatct gtttcaataa caaaggcaat gttgtcacta actgaaccat 2040 ccaggtatat gattatgaat tcacttgcaa tttcaagtca tgtacgtgaa tatatggctg 2100 aaaaatttag cccatatact aagacagcat tttctgtagt tatgacgcaa attattaagc 2160 gtgcatgcta tgaggcattt gatcaaaagg agaagataga gctaaaaaac atacatctaa 2220 cagattatga aataacacag aaaggtgtca aaccacagag agatctaaaa tctatttggt 2280 ttccaggaca agtaaattta aaagaatata taaatcaggt atatatgcca ttttatttca 2340 actctaaagg actgcatgaa aaacaccatg ttatgattga tctagcaaaa actatattag 2400 aaattgaaaa agaccagcgt ttgaatatac ctggaatctg gtctgatatt ccgaagaagc 2460 agacagttaa tattagagtc ttgatctact cacttgcaaa gacattaaac atggacacat 2520 caagacataa ctatatacga tctaggatag aaaataataa caatctaaag agatctataa 2580 ccaccatatc tacatttact agttctaaat catgcattaa gattggagac tttagtgaat 2640 ttaaaaccgt aagaaaaaag atgattgaca gtatgaaaaa ggaaataaat aaatacacag 2700 ttgcaaatcc agaatttgca gaagatctag atacatctta tgccatacat catgctgatt 2760 atgcagatgt gcgtaaagct ataccgaatt atgctgattg tatatcaaca aaggtttttg 2820 acgcattgta tgaaaagata aaaaacggcg agattgatga taaaccaaca gtatcacata 2880 tacttgagat aatgaaaaaa cataaacagt tttattttag tttctttaac aaggggcaaa 2940 aaacagcaaa agatagagaa atctttgttg gtgaatttga ggctaagatg tgcttatatt 3000 taattgaaag aatctctaaa gaacgttgtc gtctaaaccc agaagaaatg atcagcgaac 3060 caggagattc taaattaaaa aaactcgaag atctggcaga agcagaaata cgatatacag 3120 cacagacgct aaaaaacctt aatcggaaaa ttcaaaaaga tatgtttgga tcagaaattg 3180 acattgatat gaaattgcat gctttaaaaa tagaaataaa tgctgatatg tcaaaatgga 3240 gtgctcaaga tgttttatac aaatattttt ggctctttgt cttagaccct gtcctgtata 3300 aatatgagaa agagagaatc ttatatttcc tatgcaatta tatgcaaaaa agactgattc 3360 taccagatga tctaattgca aatattttag atcaaaggat ccagcgccaa gacgacatca 3420 tatatgagat gagtaatgga ctcactcaga attgggttga gattaagagg aattggctcc 3480 aaggcaactt aaattacact agtagctatt tgcatacatg ctcaatgaat gtttacaaag 3540 atataataaa aagatctatt gatttgcttg aaggggaaac actagttaat tcaatggtac 3600 attcggatga taatcataca tcactggtta tagtccaaaa taaattaaat gacaatattt 3660 taattgagtt ctcaataaaa ttatttgaaa agatatgctt aacatttgga aatcaagcta 3720 atatgaaaaa aacatattta acaaatttta tcaaagaatt tgtttcatta tttaacatat 3780 atggtgaacc attttcagta tacgggcgtt tcttactaac agctgtaggt gactgtgctt 3840 acttaggacc ttatgaagat tgtgctagta ggttatcagc aacacagact gcaataaagc 3900 atggctgccc gccatcactt gcatggatca gcatagcttt gaatcaatgg atcacacata 3960 acacatataa tatgcttcct ggtcaaaata atgatccatg taatatatta ccatgctata 4020 acagatttga ggttcctatc gaattgtgtg ggttattgaa ttgctctttg cctagcattg 4080 caatagcagg tttagaagca gataatcttg aatttttagt taggacatca cggaaactgt 4140 catctgtaat gtaccaacgt gagccgatac aagtgcaata tgaacacatt ttagattggg 4200 atataagcca attaactgaa atagaaacaa tcaggtttaa aatgttacga ttcatggccc 4260 tagactcttc tatgtcttca gatgatggaa tgggtgaaac aagtgacatg agatcaagat 4320 ctctgcttac tccaagaaag tttacaacac aagcatcact atcaaggcta gtatcttata 4380 atgattatca acagattata caggatcaaa ctaaaattga cgaattgtta ggctatttta 4440 tacagtgccc acagttatta gtcacaaaag gcgaaaatgt agaagaattc tgccaatcta 4500 taagatttag gtatactagc aggaaattta aagaatcatt atcaatacaa aatccagctc 4560 aactgtttat agagcaaata ctatttgcaa ataaaccaat gattgactat acaagtatcc 4620 atgataaatt atttggtatt caagatgacc ctaatatatc cgataccaca tgcattattg 4680 gaaagaaaac tttccctgaa acttataatc agatcaaatg tgatttagag agatttgccc 4740 taacaagtga tgatattaaa acagtttata gctattgctt aatgaacgat cctatattaa 4800 tagcatgtgc aaataatata atattgtcta tgaaaggcat gtctattgat agatcggcta 4860 tgacatgtgc acagatgccg gagattaaaa gcctaaaagt aatctaccat agcccagcta 4920 tggtcttgag agcatatgta actggtgata tgaacattcg gggggcagaa ccagatgaga 4980 tgaggaggga tatataccac cttgaagaat tcatagaaaa aacaaatatt agaaacaaga 5040 tgagagaaag gattaacaaa aacgaaatca aatccaatgg tagagatatc aaatttgaaa 5100 ttaaggaatt gaccaaatat tatcaaatat gttatgacta tatcaaatct actgagcata 5160 aaataaaaat atttatttta cctaaaaggc cagttactcc ttctgacttt tgttctatag 5220 tagctggcaa tttgatgtta gacaataaat ggattacaat acaccactta aagcagataa 5280 cttcgcaaac aaagaaagca caaatagcaa cctcaaccga tttagaattg cagctagcat 5340 acgaatgctt tcgcttaatt gcacattttg cagattcctt tttagcagag aattctagaa 5400 agcaatttct taaaaaagtt gttgaagagt tctcttataa aggggtttca gttaaaaatt 5460 tgtatgataa aataaagcat tcaagactga gatcaaagat agttcccata ttgtattata 5520 tgaatgacct agatcagcta gatctagaca ggcatgatgc tgaaaaagca gaagagcaaa 5580 ttacatggaa taactggcaa acatcaagag aatttcagac aggtccgata gatttatcaa 5640 taaaaggata tgggcgtact atccgaatta taggcaataa ttctaaacta actgcagcag 5700 aacttcaaat aagtagaata cgtgatgata taatatctag acatagccaa gcattgctaa 5760 acaaaaatca tggactaaaa tttgaactta tggaagaata caaagatcta gaccctaagt 5820 tgttttatat atgctatcaa cttagggcta aaaaaaggta tcattataat atattatcag 5880 ttccacatat aacagagcac aataggcgaa cacaggaatc caaaataaga tctacaaatt 5940 attgggtgcc agtgtgccca gtagcaatct ctaagttaat atataatgat aagcctcaat 6000 tagcattgat taagcgatta aacatggaca gtataaagtt gacatcaata caagtagctg 6060 tcgaagacta tgcaatgatt aggaaatgca actttgccaa gatgcaattt tttgatggcc 6120 cggaactacc atgtggtggt atagatatct caaaaatgat gaaatctcaa aatgtactaa 6180 atctgcaggt tgacacttta cagagtatat cacttattga attgtgccga atttttaatt 6240 gtaaaggtac caaagaagac aacaacgctt ttgaattctt atctgatgaa gttcttgatg 6300 aggagataga tgaagaactt gattcctcac cagtgttaaa aataacatac acaaagaagt 6360 cgatgagaaa taatacatat aaaaatataa ttgtaaaggc actaatacgc gaatgtgaca 6420 aatttgaaga atgttttgac ataaccgatg agggtttcac gtcagatagt aacctagaga 6480 ttctagaatc tctggtatgg attttgaaag aattacatac aaaccaatgg tcaacagagt 6540 tgatgcagtg cattcatatg gcattgtata gaaatgaaat ggatcacctg tttcacagat 6600 tcactatacc agaacaattt gtagacaatc caatatcgct aaactataaa tggtcaaatg 6660 taatagaatt cctagtaaca ttaatgcaga tagactataa acaggaacca tgggtttcga 6720 ttatggcaca ttcattaaat aaagcagttg aatatgcaac tgaaaggaaa attcaggaat 6780 cagctaaaga gaacaaactc caaaagttta taaaagggaa gaagatgggt ggaaaatcta 6840 agtttgactt ttaatataac attcaatatt caaaccagcc ttgatttcat gctcctagag 6900 ttatattctc taatatacaa ttaattattt aattattttt aaataaattg tatctctagg 6960 ggcaca 6966 //