ID HE793686; SV 1; linear; genomic RNA; STD; VRL; 3038 BP. XX AC HE793686; XX DT 16-APR-2012 (Rel. 112, Created) DT 23-JUN-2014 (Rel. 121, Last updated, Version 2) XX DE Cucumber mosaic virus ORF2a and ORF2b genes, segment RNA2, genomic RNA, DE strain R XX KW complete viral segment. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3038 RA Jacquemond M.; RT ; RL Submitted (16-MAR-2012) to the INSDC. RL INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143 RL Montfavet Cedex, FRANCE. XX RN [2] RX DOI; 10.1094/MPMI-02-13-0057-R. RX PUBMED; 23530600. RA Morroni M., Jacquemond M., Tepfer M.; RT "Deep sequencing of recombinant virus populations in transgenic and RT nontransgenic plants infected with Cucumber mosaic virus"; RL Mol. Plant Microbe Interact. 26(7):801-811(2013). XX DR MD5; f1514edb83761cb38bd00cd8fa3f517d. XX CC related sequence HE793685. XX FH Key Location/Qualifiers FH FT source 1..3038 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Ranunculus asiaticus" FT /strain="R" FT /mol_type="genomic RNA" FT /country="France" FT /collection_date="1969" FT /db_xref="taxon:12305" FT CDS 93..2615 FT /gene="ORF2a" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:I0JV69" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:I0JV69" FT /protein_id="CCG85336.1" FT /translation="MTSPPPTFSFANLLNGSYGVDTPEEVERVRREQREDAEAALRNYK FT PLPTVDVSESVPRDEPIVSQTVAAAPVTSVVDAFVSFGAEDYLEMSPSELLSAFELMVK FT PLRIGEVLCPNFDRSLFISSVAMARTLLLAPLTSTRTLKRFEDLVAAIYLKTDFFLEDD FT GPQTDVSQSDVPGYIFEPGQHSSGFEPPPICAKCDLILYQCPCFDFNALRESCAEKTFS FT HDYVIEGLDGVIDNATLLSNLGPFLLPVHCSYSKTEDPDFVVDPSLARPTDRVDAHVVQ FT AVCDTTLPTHVNYDDSFHQVFVDSADYSIDMDHVRLRQSDLVAKIPDGGHMLPVLNTGS FT GHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFRLSYMNVDALAKSNFVN FT VVGNFHAYMQKWQSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVTDTLNVDRPVPATI FT TFHKKTITSQFSPLFVSLFERFQRCLRERIVLPVGKISSLEMTGFSVLNKHCLEIDLSK FT FDKSQGEFHLMIQEHILNDLGCPAPVTKWWCDFHRFSYIKDKRAGVGMPISFQRRTGDA FT FTYFGNTIVTMAEFAWCYDTDQFDRLLFSGDDSLAFSKLPPVGDPSKFTTLFNMEAKVM FT EPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNNDFLFAHFMSFVDRLK FT FMDRMSQSCIDQLSIFFELKYKKSGNEAAQVLGAFKKYTANFNAYKELYYSDRQQCDLV FT NTFCISEFQVIRRTTIKKKKNGCVDSSGVDRRPPPSPFAGGETSKTKVSRQKPASEGLQ FT KSQRESAIHSETFPDVTIPRSRSRGLVS" FT CDS 2413..2715 FT /gene="ORF2b" FT /product="silencing suppressor" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:I0JV70" FT /protein_id="CCG85337.1" FT /translation="MDVLTVVVSTADLHLAHLQEVKRRRRKSHVRNRRARGYKSPSERA FT RSIARLFQMLPFHGVDPVDWFPDVVRSPSVTSLVSYEPFDDTDWFAGNEWAEGSF" XX SQ Sequence 3038 BP; 724 A; 697 C; 682 G; 935 T; 0 other; gtttatttac aagagcgtat ggttcaaccc ctgcctcctc tgtgaaatta ccctagtttt 60 attgatctac ttctagtctc ttttctgtta ctatgacaag tcctccaccc actttctcat 120 tcgccaatct gttgaatggc tcctatggtg ttgacactcc cgaggaagtg gaacgcgtta 180 gacgtgaaca acgcgaagat gctgaggcgg ctttacgtaa ttataagcct ttacccactg 240 tggatgtcag tgagagtgtc cctagagacg aacctattgt ctcgcaaacc gtcgctgcag 300 ctcctgttac atcagtcgtt gacgcgtttg tttcttttgg tgctgaggac taccttgaaa 360 tgtccccatc tgagctgctt tccgcttttg agttgatggt caaacccttg cgtatcggtg 420 aagtgttgtg cccgaatttt gatcgttcgc tattcatttc cagcgtcgct atggctagga 480 cgctgttgtt ggcaccactc acatccaccc gaacgttgaa gcgttttgaa gaccttgtgg 540 ccgcgatcta tctaaaaact gattttttct tagaagacga tgggccccag actgatgtct 600 cccaaagcga tgtgcccggt tatatcttcg aaccagggca acactcatcc ggttttgaac 660 ccccccctat ttgtgctaaa tgtgacttga ttttgtatca atgtccgtgt ttcgatttta 720 acgcacttcg tgagtcttgc gcagagaaaa cattctctca cgactatgtt atcgagggtc 780 tcgatggtgt cattgataac gctacgctgt tatcaaattt gggaccattt ttgttacctg 840 tccattgttc ttattcaaag accgaagacc ccgatttcgt cgttgatcct agtcttgcgc 900 gacctaccga tagggttgat gcacatgtag ttcaagccgt ttgcgatacc actctgccca 960 cccatgttaa ctacgatgat tccttccatc aagtctttgt ggactctgct gattattcca 1020 ttgacatgga tcacgttcgg ttacgtcaat ccgatttagt agcaaaaatt ccggatggtg 1080 ggcatatgtt accggtgtta aataccggga gtggtcacaa gagagtaggt actacgaagg 1140 aggtcttaac agcaataaag aaaagaaatg ctgatgtccc tgagcttggt gactctgtta 1200 atctgtcgcg cctgagcaaa gcagtagccg aacggtttcg tctctcgtat atgaatgttg 1260 acgctttggc taaaagtaac tttgttaatg ttgtcggtaa ttttcacgct tacatgcaaa 1320 aatggcaatc ttctggactt tcttatgatg atcttcctga tcttcacgcg gagaatttac 1380 agttttatga tcacatgatt aagtccgatg ttaagccagt tgtcaccgac acgttgaacg 1440 tcgacagacc tgtcccagct actattacat ttcacaaaaa gaccataaca tcccagttct 1500 caccgttgtt tgtatctctg tttgagagat tccagagatg ccttcgggaa cgtattgttc 1560 tgcccgttgg taagatttcc tcccttgaga tgactggttt ttcagtcttg aacaaacatt 1620 gtcttgaaat tgatttatct aaattcgaca aatctcaagg tgagttccac cttatgattc 1680 aagagcatat tctcaacgat cttggttgcc cagcacccgt caccaaatgg tggtgtgact 1740 ttcataggtt ttcctatatt aaagacaaac gtgctggggt tggaatgccc atcagttttc 1800 aacgccgtac tggtgacgct ttcacctatt ttggcaatac tattgtcacg atggctgagt 1860 ttgcttggtg ttatgacact gatcaatttg accgattgct cttttctggt gatgattctc 1920 tggctttttc taagctccca cctgttggag atcccagtaa gtttacaact ttattcaaca 1980 tggaagctaa ggtgatggaa cctgcagtac cttacatctg ttcgaagttt ctactctctg 2040 atgagtttgg taatacgttt tcagtccccg acccactacg tgaaatccag cggttaggta 2100 ccaagaagat accgtattcg gacaacaacg atttcttgtt cgctcatttt atgagttttg 2160 ttgacaggct gaagtttatg gacaggatgt cgcagtcctg tattgatcaa ttgtccattt 2220 tcttcgagtt gaaatacaag aagtccggga acgaagccgc ccaagttttg ggcgcgttta 2280 agaagtacac cgccaatttt aacgcctata aggagcttta ttactctgac cgtcaacaat 2340 gtgacttggt caatacgttt tgtatatctg agttccaggt gattcgtcgc actaccatta 2400 agaagaagaa gaatggatgt gttgacagta gtggtgtcga ccgccgacct ccacctagcc 2460 catttgcagg aggtgaaacg tcgaagacga aagtctcacg tcagaaaccg gcgagcgagg 2520 ggttacaaaa gtcccagcga gagagcgcga tccatagcga gacttttcca gatgttacca 2580 ttccacggag tagatcccgt ggattggttt cctgatgtcg ttcgctctcc gtccgttacc 2640 agccttgttt cttatgaacc ttttgatgat actgattggt ttgctggtaa cgaatgggcc 2700 gaagggtcgt tttgatttcc gacccttcgt cgtccgaaga cgttaaacta cactctcttt 2760 attgcgagtg ctgagttggt agtttgcttt aaactatctg aagtcgctaa atccattact 2820 ggttgcgaac gggttgtcca tccagcttac ggctaaaatg gtcagtcatg ccccaaaggc 2880 atgccgacac cctacagggt tgtcgaggta cccttgaaat catctcctag atttcttcgg 2940 aagggcttcg tgagaagctc gtgcacggta atacactgat attaccaaga gtgcgggtat 3000 cgcctgtggt tttccacagg ttctccataa ggagacca 3038 //