ID HE793684; SV 1; linear; genomic RNA; STD; VRL; 3048 BP. XX AC HE793684; XX DT 16-APR-2012 (Rel. 112, Created) DT 23-JUN-2014 (Rel. 121, Last updated, Version 2) XX DE Cucumber mosaic virus ORF2a and ORF2b genes, segment RNA2, genomic RNA, DE strain I17F XX KW complete viral segment. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3048 RA Jacquemond M.; RT ; RL Submitted (16-MAR-2012) to the INSDC. RL INRA, Station de Pathologie Vegetale, Domaine Saint Maurice, BP 9484143 RL Montfavet Cedex, FRANCE. XX RN [2] RX DOI; 10.1094/MPMI-02-13-0057-R. RX PUBMED; 23530600. RA Morroni M., Jacquemond M., Tepfer M.; RT "Deep sequencing of recombinant virus populations in transgenic and RT nontransgenic plants infected with Cucumber mosaic virus"; RL Mol. Plant Microbe Interact. 26(7):801-811(2013). XX DR MD5; 367853b04f683f7965f8c0df94e2ab27. DR EuropePMC; PMC4722753; 26801763. XX CC related sequence HE793683. XX FH Key Location/Qualifiers FH FT source 1..3048 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Solanum lycopersicum" FT /strain="I17F" FT /mol_type="genomic RNA" FT /country="France" FT /collection_date="1975" FT /db_xref="taxon:12305" FT CDS 86..2659 FT /gene="ORF2a" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:I0JV66" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:I0JV66" FT /protein_id="CCG85333.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EAGDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKYCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKVSQTESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVMPPCERGGVTRV" FT CDS 2418..2750 FT /gene="ORF2b" FT /product="silencing suppressor" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q8B3M6" FT /protein_id="CCG85334.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHVNVAELPESEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3048 BP; 772 A; 681 C; 705 G; 890 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagactta 60 aaacttttct ttctagtatc tttctatggc tttccctgcc cccgcattct cactagccaa 120 tcttttgaac ggcagttacg gtgtcgacac tcccgaggat gtggaacgtt tgcgatctga 180 gcaacgcgaa gaggctgctg cggcctgtcg taattacagg cccctacccg ctgtggatgt 240 cagcgagagt gtcacagagg acgcgcattc cctccgaact cctgacggag ctcccgctga 300 agcggtgtct gatgagtttg taacttatgg tgctgaagat taccttgaaa aatctgatga 360 tgagctcctt gtcgcttttg agacgatggt caaacccatg cgtatcggac aactatggtg 420 ccctgcgttt aataaatgtt cttttatttc cagcattgct atggccagag ctttgttgtt 480 ggcacctaga acatcccacc gaaccatgaa gtgttttgaa gacctggtcg cggctattta 540 cactaaatct gatttctact acagtgaaga gtgtgaagcc ggcgacgctc agatagatat 600 ctcgtctcgc gacgtacccg gttattcttt cgaaccgtgg tcccgaacgt ctggatttga 660 accgccgccc atttgtgaag cgtgcgacat gatcatgtac cagtgcccgt gttttgattt 720 taatgcttta aagaaatcgt gcgctgagag gactttcgct gatgattatg ttattgaagg 780 tttagatggt gttgttgata atgcgactct gttgtcgaat ttgggtccat ttttggtacc 840 cgtgaagtgt caatatgaaa aatgtccaac gccaaccatc gcgattcctc cggatttaaa 900 ccgtgctact gatcgtgttg atatcaattt agttcaatcc atttgtgact cgactctgcc 960 cactcatagt aattacgacg actcttttca tcaagtgttc gtcgaaagtg cagactattc 1020 tatagatctg gatcatgtta gacttcgaca gtctgatctt attgcaaaaa ttccagattc 1080 agggcatatg ataccggttc tgaacaccgg gagcggtcac aagagagtag gtacaacgaa 1140 ggaggtcctt acagcaatta agaaacgtaa tgctgacgtt ccagagctag gtgattccgt 1200 taatctgtct agattgagta aagctgtggc tgagagattc ttcatttcat acatcaatgg 1260 taactctcta gcatccagta actttgttaa tgtcgttagt aacttccacg attacatgga 1320 aaagtggaag tcctcaggtc tttcttatga tgatcttccg gatcttcatg ctgagaattt 1380 gcagttttat gaccacatga taaaatccga tgtgaaacct gtggtgagcg acacactcaa 1440 tatcgacaga ccggttccag ctactataac gtatcataag aaaagtataa cctcccagtt 1500 ctcaccgtta ttcacagcgc tattcgagcg cttccagaga tgccttcgag aacgtattat 1560 tcttcctgtt ggtaagattt catcccttga gatggcagga tttgatgtca agaacaaata 1620 ctgcctcgag attgatctgt ctaagtttga taagtctcaa ggtgaatttc atttgctaat 1680 ccaggaacac attttgaatg gtctaggatg tccagctccg ataactaagt ggtggtgtga 1740 tttccatcga ttctcttaca ttagagaccg tagagctggt gttggtatgc ctattagttt 1800 ccagagacga actggcgatg cattcactta ttttggcaat accatcgtca ccatggctga 1860 gtttgcctgg tgttatgaca ccgaccaatt cgaaaagctt ttattctcag gcgatgattc 1920 tctaggattt tcactgcttc cccctgttgg tgacccgagt aaattcacaa ctcttttcaa 1980 catggaagct aaggtgatgg aacctgccgt accatatatt tgttcgaagt tcttactctc 2040 tgacgagttc ggtaacacat tttccgttcc agatccattg cgcgaggttc agcggttagg 2100 aacaaagaaa attccctatt ctgacaatga tgaattcttg tttgctcact tcatgagctt 2160 tgttgatcga ttgaagtttt tggaccgaat gtctcagtcg tgtatcgatc aactttcgat 2220 tttcttcgaa ttgaaataca agaagtctgg ggaagaggct gctttaatgt taggcgcctt 2280 taagaagtat accgctaatt tccagtccta caaagaactc tattattcag atcgtcgtca 2340 gtgcgaattg atcaattcgt tttgtagtac agagttcagg gttgagcgtg taaattccaa 2400 caaacagcga aagaaatatg gaattgaacg taggtgcaat gacaaacgtc gaactccaac 2460 tggctcgtat ggtggaggcg aagaagcaga gacgaaggtc tcacaaacag aatcgacggg 2520 aacgaggtca caaaagtccc agcgagagag cgcgttcaaa tctcagactg ttccgcttcc 2580 taccgttcta tcaagtagat ggttcggaac tgacagggtc atgccgccat gtgaacgtgg 2640 cggagttacc cgagtctgag gcctctcgtt tagagttatc ggcggaagac catgattttg 2700 acgatacaga ttggttcgcc ggtaacgaat gggcggaagg tgctttctga aacctcccct 2760 tccgcatctc cctccagttt tctgtggcgg gagctgagtt ggcagtgttg ctataaactg 2820 tctgaagtca ctaaacacat tgtggtgaac gggttgtcca tccagcttac ggctaaaatg 2880 gtcagtcgta gagaaatcta cgccagcaga cttacaagtc tctgaggcac ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tccgtgtact tctagcacaa cgtgctagtt 3000 tcagggtacg ggtgcccccc actttgtggg gcctccataa ggagacca 3048 //