ID HE793426; SV 1; circular; genomic DNA; STD; VRL; 2782 BP. XX AC HE793426; XX DT 15-MAR-2013 (Rel. 116, Created) DT 07-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Okra leaf curl Cameroon virus complete sequence, isolate Lik1:GR23 XX KW complete genome. XX OS Okra leaf curl Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2782 RA Naeem Sattar M.N.; RT ; RL Submitted (15-MAR-2012) to the INSDC. RL Naeem Sattar M.N., Plant Biology and Forest Genetics, Swedish University of RL Agricultural Sciences, Box 7080, 750 07, SWEDEN. XX RN [2] RX DOI; 10.1016/j.virusres.2013.03.010. RX PUBMED; 23535770. RA Leke W.N., Sattar M.N., Ngane E.B., Ngeve J.M., Kvarnheden A., Brown J.K.; RT "Molecular characterization of begomoviruses and DNA satellites associated RT with okra leaf curl disease in Cameroon"; RL Virus Res. 174(1-2):116-125(2013). XX DR MD5; ff67cb953b8818237fff669888c26af2. XX FH Key Location/Qualifiers FH FT source 1..2782 FT /organism="Okra leaf curl Cameroon virus" FT /host="Abelmoschus esculentus" FT /strain="Cameroon" FT /isolate="Lik1:GR23" FT /mol_type="genomic DNA" FT /country="Cameroon:Likomba, Southwestern Cameroon" FT /collection_date="Dec-2007" FT /db_xref="taxon:912034" FT CDS 181..531 FT /gene="V2" FT /product="Pre-coat protein" FT /db_xref="GOA:M5BE86" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M5BE86" FT /protein_id="CCG85202.1" FT /translation="MWDPLVNEFPESVHGFRCMLAIKYLQALEDTYEPNTLGSDLIRDL FT ISVIRAKNYVEATRRYNYFHARLESSSKAELRQPLHEPCSCPHCPRHKQTSVMDLPANV FT QKAQNVPDVQKP" FT CDS 341..1117 FT /gene="V1" FT /product="Coat protein" FT /db_xref="GOA:M5BEW5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M5BEW5" FT /protein_id="CCG85203.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPTVLGTSKRRSW FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVTHTGNSRCLSDVTRGNGLTH FT RTGKRFVIKSVYILGKVWMDENVKKSNHTNTCMFWLVRDRRPYGNSPQDFGQVFNMFDN FT EPSTATVMNDKRDRYQVLKRFQATVTGGPSGCKEAAIVRRFFKINHHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYASLKIRMYFYDSVSN" FT CDS complement(1114..1515) FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:M5BE52" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M5BE52" FT /protein_id="CCG85204.1" FT /translation="MDSRTGELITAHQSENGVLIWTINNPLYFKTIKEFRLTHGNQTMI FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRLGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY" FT CDS complement(1259..1663) FT /gene="C2" FT /product="transcriptional associated protein" FT /db_xref="GOA:M5BF71" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M5BF71" FT /protein_id="CCG85205.1" FT /translation="MRLSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF FT TCRDNGFTHRGTHHCASEREWRTYLDNQQSPVFQNHQGVSSNARESNNDRDADKIQLQP FT QEGIGDSQMFHELPGLDDLTPSDWSFLKRI" FT CDS complement(1563..2651) FT /gene="C1" FT /product="replication associated protein" FT /db_xref="GOA:M5BE44" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M5BE44" FT /protein_id="CCG85206.1" FT /translation="MAPSKRFQIYAKNYFLTFPKCSLTKEEALEQIQKISTASNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNNNLERIFEEPPAPYVCPFLSSSFDQVPEELEEWAAENVVEAAARPCRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWALKNATFITLSNPL FT YSGTNQSPASGSQEESNQETQD" FT CDS complement(2201..2494) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M5BE87" FT /protein_id="CCG85207.1" FT /translation="MANLISMCFSSSKGSSSAKIRDYSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHSNGENSRSTEDLPEEANRQPMTLTQQRLTQEVRQRLLGL" XX SQ Sequence 2782 BP; 720 A; 603 C; 617 G; 842 T; 0 other; accggtgggc gcgaaaaaaa aaatggaccc cgccccacgt gaacatgtcg cgcgagtgct 60 gaacatgtcg cgcgcgtgct gaacatgtcg cgcgatgctg tccaatcaga acgcgcgctc 120 tacgcattat aatttgaaat tttaaatata tacttgctcc ctaagttgtc cgccataact 180 atgtgggatc cgttagtgaa cgagtttccc gaatctgtgc atgggtttcg ttgtatgctt 240 gcaataaaat atttgcaggc tttagaggat acgtacgagc ccaacacgtt ggggtctgat 300 ttaattagag atttaatatc tgtgattaga gcgaagaatt atgtcgaagc gaccaggaga 360 tataattatt tccacgcccg tctcgaaagt tcgtcgaagg ctgaacttcg acagccctta 420 cacgagccgt gcagctgtcc ccactgtcct aggcacaagc aaacgtcggt catggactta 480 ccggccaatg tacagaaagc ccagaatgta ccggatgtac aaaagccctg atgttcctcg 540 aggatgtgaa ggtccatgta agatccaatc attcgatcaa cgtgactcag taacccatac 600 aggtaattca agatgtctaa gtgacgtcac aagaggtaat gggcttactc atcgtacagg 660 taaacgtttt gttatcaagt ctgtttacat attaggtaag gtctggatgg acgagaatgt 720 taagaagtcc aatcacacaa acacgtgtat gttctggtta gttagagata gacgtccata 780 tggtaatagt ccccaagatt ttggacaggt atttaatatg tttgataatg agcccagcac 840 tgcaacggtt atgaacgaca agcgtgatcg ttatcaggtt ttaaagaggt ttcaagcaac 900 tgtcactgga ggaccgtctg gttgcaaaga ggctgctatt gttaggcgtt ttttcaagat 960 aaaccatcat gtcacttaca atcatcagga agctgcgaaa tatgagaatc atacggagaa 1020 tgctttacta ttgtatatgg cttgtactca tgcgtcaaat cctgtctatg ctagtctcaa 1080 aatacgaatg tacttctacg attctgtatc gaattaatat aattttattt gaatattgtg 1140 tgtgaattca cttgccactg ttgtttgcaa tacatcgtac aaaacatgat tgactgccct 1200 aattacattg ttaattgaaa ttactcctaa tctatacaaa tatttcataa tctgcttcct 1260 aaatacgttt aagaaaagac cagtcggagg gcgtgagatc gtccagaccc ggaagttcat 1320 gaaacatttg tgaatcccca attccttcct gaggttgtag ttgaatctta tctgcatctc 1380 tatcattgtt tgattcccgt gcgttagacg aaactccttg atggttttga aatacagggg 1440 attgttgatt gtccagataa gtacgccatt ctcgctctga tgcgcagtga tgagttcccc 1500 tgtgcgtgaa tccattgtct ctgcacgtga aggctacgta taccgtgcaa ccacaaggga 1560 tgtcaatcct gcgtctcctg attgctctct tcttggcttc ccgatgctgg actttgattg 1620 gtacctgagt acagcggatt tgagagggtg atgaaagtcg cattctttaa tgcccaggat 1680 ttgagatgcg cgttcttttc ttcgtctaaa tactctttat aggacgaatt gggacctgga 1740 ttgcagagga agattgttgg gattcctcct ttaatttgaa ctggcttccc gtattttgtg 1800 ttgctttgcc agtccttttg tgcacccatg aactccttaa agtgtttcag ataatgcggg 1860 tcaacatcat ctatgacgtt ataccatgcg tcattactga acacctttgg gctcagatca 1920 agatggccgc acaggtaatt gtgaggccca agacttctgg cccatacggt cttccctgtc 1980 ctgctttccc cttcaatcac tatactaatc ggtctacatg gccgcgcagc ggcctccacg 2040 acgttctctg ccgcccattc ttcaagttct tctggaactt ggtcgaacga agaagataaa 2100 aaaggacaaa cataaggagc tggaggctcc tcaaaaatcc tctctaaatt attatttaaa 2160 ttatgaaatt gtaaaacaaa gtctttggga gctaactccc ttataaccct aagagcctct 2220 gccttacttc ctgcgttaag cgctgctgcg taagcgtcat tggctgtctg ttggcctcct 2280 ctggcagatc ttccgtcgat ctggaattct ccccattcga gtgtgtctcc atccttgtcg 2340 atgtaggact tgacgtcgga gctggattta gctccctgaa tgtttggatg gaaatgtgct 2400 gacctatttg gggagaccag gtcgaatagt ctctgatttt ggcacttgaa cttcccttcg 2460 aactggagaa gcacatggag atgaggttgg ccatcctcgt gaagctctct gcagattttg 2520 atgtatttct tgtttgatgc tgtgcttatt ttctgtattt gctctagggc ttcctctttg 2580 gttagagaac attttgggaa agtgaggaaa taattcttgg catatatttg gaatctcttg 2640 ctaggagcca ttgacttggt caatcggtac tcagatgctt ctctccagtt tatcggtact 2700 caatatatag tgagtaccaa atggcatttt ggtaaaaatc ccaacaaatt tgaaccccca 2760 tagcgcccac cgttctaata tt 2782 //