Dbfetch
ID HE616778; SV 1; circular; genomic DNA; STD; VRL; 2737 BP. XX AC HE616778; XX DT 05-MAR-2012 (Rel. 112, Created) DT 05-MAR-2012 (Rel. 112, Last updated, Version 1) XX DE African cassava mosaic Burkina Faso virus DNA-B complete genome, isolate DE BF:Oua:BF127:08 XX KW complete genome. XX OS African cassava mosaic Burkina Faso virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2737 RA Tiendrebeogo F.; RT ; RL Submitted (04-DEC-2011) to the INSDC. RL Tiendrebeogo F., Institut de l'Environnement et de Recherches Agricoles RL (INERA), 01 BP 476 Ouagadougou 01, BURKINA FASO. XX RN [2] RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Harimalala M.A., Villemot J., RA Traore V.S.E., Konate G., Traore A.S., Barro N., Reynaud B., Traore O., RA Lett J.M.; RT "Evolution of African cassava mosaic virus by recombination between RT bipartite and monopartite begomoviruses"; RL Unpublished. XX DR MD5; 2dd5a6f074251fdc6e6934e7f9dc51c2. DR EuropePMC; PMC5425491; 28243802. XX FH Key Location/Qualifiers FH FT source 1..2737 FT /organism="African cassava mosaic Burkina Faso virus" FT /segment="DNA-B" FT /host="Manihot esculenta" FT /isolate="BF:Oua:BF127:08" FT /mol_type="genomic DNA" FT /country="Burkina Faso:Ouagadougou" FT /collected_by="F. Tiendrebeogo, V.S.E. Traore, O. Traore" FT /collection_date="2008" FT /db_xref="taxon:2560285" FT CDS 438..1208 FT /gene="BV1" FT /product="movement protein (MP)" FT /db_xref="GOA:H8WR20" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:H8WR20" FT /protein_id="CCE94328.1" FT /translation="MYTIRKQSRNFQRKFNSNTTNRYPIRRKYVGGHTRPSVRRRLSYE FT PVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVSGV FT IHAKANGIDDPMEVSNVVNGVFVFSVIMDTKPYLPAGVQALPTFEELFGSYSACYVNLR FT LLNNQQHRYRVLHSVKRFVSSAGDTKVSQFRFNKRLSTRRYNIWTSFHDGDMVNAGGNY FT RNISKNAILVSYAFVSEHSMSCNPFVQIETSYVG" FT CDS complement(1217..2113) FT /codon_start=1 FT /gene="BC1" FT /product="nuclear shuttle protein (NSP)" FT /db_xref="GOA:H8WR21" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:H8WR21" FT /protein_id="CCE94329.1" FT /translation="MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRIM FT GKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYFSA FT SYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIRFKQPTIKILSKD FT YGPDCVDFWSVGKPKPIRRLIQNETGTDYDTGPKYRPITVQPGETWATKSTIGRSTSIR FT YTGPKQIDFDESSSKQYASEAEFPLRGLHKLPEASLDPGDSVSQTHSMSKKDIESIIEH FT TVNKCLIAHRGSSHKDL" XX SQ Sequence 2737 BP; 772 A; 492 C; 609 G; 864 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtcccctcgc acatgttggc ctcgcctttt 60 tttttgaaag gggtcccccc cacatgtttc tcttacctgc gtatactacg gtggtccccg 120 catgcatgtg ttgtctgcta tggataatgc atgtgtggcc cacatgcaaa taaatgatct 180 gcgggcctat cgaatgacag cctgtgctac taaattatat ttagtatatt ggtcatttct 240 ctgagttaat aaaatggtat attttattga actgttaata ttgccattcg atagtagtga 300 tttataatca tcaatctgac aacgatcatg aaggacaatt aaggctagta gcgtaatcgt 360 gtatgtatta tatatagggt tctaacatgc atgagttgga gtatatcagg tatcggaatt 420 atatacattg atttgtaatg tatactatca ggaagcagtc tagaaacttc caaaggaaat 480 ttaacagcaa taccactaac agatatccaa tcaggcgtaa gtatgttggt gggcatacta 540 gaccatctgt taggcgaaga ttgtcatatg agccagtgga gagaccgttg gtccataatg 600 ttttatgtga gaagcaacat ggtgatgtgt ttaatttgca gcagaacaca agttacacgt 660 catttgtgac ttatccttcc aggggaccat ctggtgatgg gcgtagtcgg gattacatca 720 agttgcaaag tatgtccgtc tcgggagtga tacatgcgaa ggcgaatggc attgatgatc 780 ctatggaggt gtctaatgta gttaatggag tgttcgtgtt tagtgtaatc atggacacaa 840 agccttattt acctgccggt gttcaagctc ttccgacatt tgaagagctg ttcggatcat 900 attccgcttg ttacgttaat ttaagattat tgaataatca acagcatcga tatagggtct 960 tgcacagcgt gaaacgtttc gtgtcatctg caggagatac taaggtatcg caatttaggt 1020 ttaataagcg attgagcacc aggcgatata atatttggac atcattccat gatggggata 1080 tggtaaatgc aggtggaaat tataggaaca taagcaagaa tgctattctt gttagttatg 1140 cttttgtatc agagcattca atgtcttgta atccatttgt acaaatagaa acatcctatg 1200 ttggatgatg tattattcat aaatctttat ggctactgcc tctatgtgct attaagcact 1260 tgtttacagt gtgttctata atgctttcaa tgtccttttt cgacatggag tgggtttgtg 1320 aaacggagtc ccctggatct agggaagctt caggtagctt gtgtagtcct cgaagtggga 1380 attcagcctc agaggcatac tgcttggagg atgattcgtc gaaatcaatt tgtttggggc 1440 ctgtgtatct gatgctggta gagcgcccaa ttgtggattt tgtagcccat gtttcccctg 1500 gttggaccgt gatgggccta tatttaggcc cagtgtcata atctgtaccg gtctcattct 1560 gaatgagcct tcgaatgggc ttaggttttc caacggacca gaagtccaca cagtcaggcc 1620 catagtcttt ggatagtatt tttatagtgg gctgtttaaa tcgaatgtcc gttgaatgtt 1680 tggcagctga cagcttcagt tttgccttaa tttgggcaaa tgtgatgcca ttctttacgt 1740 ttgagtcttc aaccttatac agcagctgcc atggtacgtt atcatcaatt gaaaagtaag 1800 atgcagagaa ataatggagg tccacattac acccaatggg aaatgtgaat tgggcttggt 1860 cttgttgctc atcactgagc ctagtgtccc gaatggtaac gataacagaa ccctgtgcat 1920 taaagggcac ttgattcctg tattcaatga cgacatggtc gaccttcatg catttgccca 1980 tgatacgtac ccttgttctt tcaagggtcg aaggaaattg aagtgtaatc ggtgattcat 2040 cattcgtcag tttgtattct gttcttgctg attgaatata gtcgctggat atgacaggta 2100 cagatgtatc catagtcaac actcggatta taagcgtgtc aaagccacag cacctgtctc 2160 atgataaaca tgaataatct attattaaac tggccgcgca gcggaatggc tttaatgcaa 2220 gataaatcag aagcttttgt caacagggta aacatattgt agaaatatat acatatatgt 2280 ggtatcctat cggaaaaatg cgtctatgtt taatccaaat caaacatata tacatgcata 2340 cagcattagt cgttgaaaca ttatttatat atagatatgt acctgataat aacttaaatt 2400 ggatatctgc tggagtggaa tgtggatagt cttattagca aagtggtcat ataaatatgt 2460 tttatatatt tattaaggag ttatccaacg agtgatagtt tacgttgtta gatttgcatg 2520 ttcaaatcta aaataagcaa ctacactata gtgagagaaa gttagagaga gacgctctca 2580 actagcaccg attgactgcc ctggatactt ctcccctgtt aattggggtc ctatatatag 2640 tttgcaccaa atggcataat ggtaataagt tcaactttaa tttgaatgaa aaggctcaaa 2700 atgcgcagaa cacccaaggg gccaaccgta taatatt 2737 //