ID HE586988; SV 2; linear; mRNA; STD; VRL; 2575 BP. XX AC HE586988; XX DT 20-SEP-2011 (Rel. 110, Created) DT 13-AUG-2012 (Rel. 113, Last updated, Version 3) XX DE Gremmeniella mitovirus viral mRNA for RNA dependent RNA polymerase (RdRp DE gene), strain GaMRV-S53, isolate Gremmeniella abietina-P3-7 XX KW . XX OS Gremmeniella mitovirus OC Viruses; Riboviria; Narnaviridae; Mitovirus; unclassified Mitovirus. XX RN [1] RC revised by [3] RA Botella L.; RT ; RL Submitted (06-SEP-2011) to the INSDC. RL Resources, AV. Madrid 44 Edif E. Campus, Dept. Plant Production and Forest, RL Universty of Valladolid, SPAIN. XX RN [2] RX PUBMED; 22862915. RA Botella L., Tuomivirta T.T., Vervuurt S., Diez J.J., Hantula J.; RT "Occurrence of two different species of mitoviruses in the European race of RT Gremmeniella abietina var. abietina, both hosted by the genetically unique RT Spanish population"; RL Fungal Biol 116(8):872-882(2012). XX RN [3] RP 1-2575 RA Botella L.; RT ; RL Submitted (18-APR-2012) to the INSDC. RL Resources, AV. Madrid 44 Edif E. Campus, Dept. Plant Production and Forest, RL Universty of Valladolid, SPAIN. XX DR MD5; e678a10cfe469fa634e50a0f545abc38. XX FH Key Location/Qualifiers FH FT source 1..2575 FT /organism="Gremmeniella mitovirus" FT /host="Gremmeniella abietina" FT /strain="GaMRV-S53" FT /isolate="Gremmeniella abietina-P3-7" FT /mol_type="mRNA" FT /country="Spain" FT /isolation_source="Pinus halepensis" FT /PCR_primers="fwd_name: Mito-SV5str, fwd_seq: FT gayccrgaatgtaarrtkag, rev_name: Mito-SV3str, rev_seq: FT catctyttagcaaattcrtawgtat" FT /db_xref="taxon:1084723" FT CDS 256..2481 FT /codon_start=1 FT /transl_table=4 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /function="catalyzes the replication of RNA from an RNA FT template" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR008686" FT /db_xref="UniProtKB/TrEMBL:G3CCB3" FT /protein_id="CCD32685.2" FT /translation="MNKNLFQIVIKLFVMIFLNTDVKLFVSLYFKCLTKHLKHHGVVST FT VKVFKQIRFHVTRYLCGSPLRINSMMIGIDKDGWPKMIDFLKPLANGTRSDKQFLLSIL FT FITRSFVEKDKTKLVPDWSTITQPRTTQKEYIIPSGFIKDWVLNNHLGTYKSEFDDSNH FT FVSVKSSPTGPSTLTALWGLWNHSYESFNWLFKITSLSGVNYLTEIMNWTWLRDLGNKN FT NNKWSKQFLGSLSLIYDPECKVRIVAMLDYTTQLFLRPIHNDLFKLLKKLPQDRTFTQD FT PLNDWEDNEHSFWSIDLTAATDRFPISLQRRLLLYIYSDPELANSWQNLLVHREYARYG FT LNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLCGINKFKDYIILGDDIVIHNDNIA FT KKYVEIMGKLGVGLSDSKTHVSKDTYEFAKRWIHKGQEISPLPITGIVNNITNPYIVLM FT NLYDFFKIKRNQYNFSGDLLTMLLKLYQGLKIYKRDKSKRFYYLSLNRFKNLDIFLFAL FT NNSFGYSTYDHKRSFLISRNYSKDLPGPKIMQDLISYVISTGLSDLTVESVNKSLKFVD FT TLIDNKSLLHIEDPNDLSNLPLFKGFQAYISNLRKTVDEWNNESISLIEASRGLVQMDI FT LPIIKGSNRKILELQTIGKIYLSGIQGINNTEFEIFGSSQMIPSNKNLGIQEGSSLNSF FT SSLSSSIDINLVFIQNELNVIAKKNWMPPATEESVADSYAAFAAMFN" XX SQ Sequence 2575 BP; 913 A; 399 C; 407 G; 855 T; 1 other; ggtgtttgcc ccttaattaa gtgtaaactg ggctaatcac ccggccaagt tttattttct 60 tggtcccagt tagcaatact atgagagtat tctagatttc ttggagtgtc cctttgggtt 120 ttatttctga aggctggaaa ctccaaccgt tggaaatacc ctacaaaaga gctaagttat 180 accattgtag ataactataa tcgctcttgg gccgcaagtc ggctatgcgg tacgcccgtt 240 taaaacttaa ttattatgaa caaaaattta tttcaaatag taattaaact attcgtaatg 300 atatttttga acacagatgt taagctcttt gtatctcttt attttaaatg tttaactaaa 360 catttaaaac accacggtgt agtgagtaca gtaaaagtat ttaaacaaat aagattccat 420 gttactcgtt atctctgtgg atcaccattg agaattaact cgatgatgat agggatagat 480 aaagatggtt gaccaaaaat gatcgatttc ttaaaacctc ttgctaatgg aacaagatct 540 gataaacaat ttcttttatc aattctgttt attacaagaa gttttgttga aaaagacaag 600 actaaattag ttccagattg aagtacaata actcaacccc gaacaactca gaaggaatat 660 atcattcctt cgggktttat taaggattga gtattaaaca accatcttgg tacttataaa 720 agtgaatttg atgattcaaa tcattttgtt tcagtgaaga gtagtccaac aggaccttca 780 acactgacag cattatgagg actatgaaat catagttatg aatcatttaa ttgacttttt 840 aagattacta gtttgtctgg tgttaattat cttactgaaa tcatgaattg gacttggtta 900 agggatctag gaaataaaaa taataataaa tgatctaaac aatttttagg atcattatca 960 ttaatttatg acccagaatg taaggtaaga attgtagcta tgttagatta tacaacacag 1020 ctatttctcc gacctataca taatgacttg tttaaacttc ttaagaagtt accacaagac 1080 agaaccttta ctcaagatcc attaaatgat tgagaagata atgagcactc attttgatca 1140 atcgacctta cggcagcaac tgatagattt ccaataagtt tacagcgaag gttattacta 1200 tatatatata gtgatcctga gctagcaaac tcttggcaga atctattagt acatagagaa 1260 tatgctcgct atgggctaaa tccaataaaa tattctgttg gacagcctat gggagcatat 1320 tcatcctgac ctgctttcac attatctcat catcttgtag ttcactgatg tgcacattta 1380 tgtggcatca ataaatttaa agattacata attcttggtg atgatatcgt tattcataac 1440 gataatatcg ctaagaaata tgttgaaata atgggaaagt taggagtggg tctatctgat 1500 agtaaaacac atgtatcaaa agatacatac gaatttgcta aaagatgaat ccataaagga 1560 caagaaatat cgccattacc tattacagga attgttaata atataacaaa tccctatata 1620 gttttaatga acttatatga tttctttaaa atcaaaagaa atcagtataa cttctcaggt 1680 gatttactaa ctatgttatt gaaattgtac caaggtctca agatctataa aagagataaa 1740 agtaaaagat tttattactt atctcttaat agatttaaaa accttgatat atttctattt 1800 gcgctgaata attcttttgg atattcaaca tatgatcaca aaagatcatt tttgatatcc 1860 agaaattaca gtaaggattt gccaggacca aaaataatgc aagatttaat atcttacgta 1920 attagtactg gtttatctga tcttactgtg gaaagtgtaa ataaatcact aaagttcgtc 1980 gatacattga tagacaataa aagtctatta catatcgaag atccaaatga tttatcaaac 2040 cttccattat tcaaaggttt tcaagcttat atctctaatc ttcgaaagac tgttgacgag 2100 tgaaataatg aatcaatttc acttatcgaa gcctctagag gattagtcca aatggatata 2160 cttccaatta ttaaaggttc taataggaaa attttagaac ttcaaactat tggaaaaata 2220 taccttagtg gaatacaagg aattaataat actgaatttg aaatttttgg ttcttctcaa 2280 atgattccct caaacaaaaa tttgggaatt caagaaggaa gttccttaaa ttcattttca 2340 tcattatctt ccagtataga tataaatttg gtttttatcc agaacgagtt aaatgttata 2400 gctaagaaga actgaatgcc tcctgcaact gaagaatcag ttgcggattc atatgcagcc 2460 tttgcagcta tgttcaatta atatcattac cggatacagt tgcaaatcta gattactcaa 2520 aaattatatt gagcctagac tccaactggg gttttacact tatgtgtaaa acacc 2575 //