ID   HE584763; SV 1; linear; genomic RNA; STD; VRL; 1863 BP.
XX
AC   HE584763;
XX
DT   23-FEB-2012 (Rel. 111, Created)
DT   05-APR-2012 (Rel. 112, Last updated, Version 3)
XX
DE   Pepper necrotic spot virus NSs gene for nonstructural protein and N gene
DE   for nucleocapsid protein, segment S, genomic RNA, strain T1 Pepper, isolate
DE   T1
XX
KW   .
XX
OS   Pepper necrotic spot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; unclassified Tospoviridae.
XX
RN   [1]
RP   1-1863
RA   Romero J.;
RT   ;
RL   Submitted (25-AUG-2011) to the INSDC.
RL   INIA, Proteccion Vegetal, Carretera de La Coruna Km. 7.0, Madrid, 28040,
RL   SPAIN.
XX
RN   [2]
RX   DOI; 10.1007/s00705-011-1217-3.
RX   PUBMED; 22218966.
RA   Torres R., Larenas J., Fribourg C., Romero J.;
RT   "Pepper necrotic spot virus, a new tospovirus infecting solanaceous crops
RT   in Peru";
RL   Arch. Virol. 157(4):609-615(2012).
XX
DR   MD5; 22dcea5073513e142971f6397b3f6158.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1863
FT                   /organism="Pepper necrotic spot virus"
FT                   /segment="S"
FT                   /host="Capsicum annum"
FT                   /strain="T1 Pepper"
FT                   /isolate="T1"
FT                   /mol_type="genomic RNA"
FT                   /country="Peru:Arequipa, La Joya"
FT                   /db_xref="taxon:1078947"
FT   CDS             <2..424
FT                   /transl_table=1
FT                   /gene="NSs"
FT                   /product="nonstructural protein"
FT                   /db_xref="InterPro:IPR004915"
FT                   /db_xref="UniProtKB/TrEMBL:H6S4T1"
FT                   /protein_id="CCD31021.1"
FT                   /translation="IVHDPSYPQRIVHALLETHTSFAQVLCNNLQEDVIIYTLNNHELT
FT                   PAKLDLGDRTLNYSEDAYKKKYFLSKTLECLPVNTQTMSYLDSIQIPSWKIDFARGEIK
FT                   ISPLAASFARSLLTLDLCGAGRKKSQLKEASKSESK"
FT   CDS             complement(935..1711)
FT                   /transl_table=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:H6S4T2"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:H6S4T2"
FT                   /protein_id="CCD31022.1"
FT                   /translation="MSKVKLTKENIIALLTQSAEVEFEEDQNQTAFNFKTFCHDNLDLL
FT                   KKMNITSCLTFLKNRQSIMKVVKQSDFTFGKITIKKTSDRIGATDMTFRRLDSMIRVKL
FT                   IEETANAENLLAIKTKIASHPLVQAYGLPLTDAKSVRLAIMLGGSIPLIASVDSFEMIS
FT                   VVLAIYQDAKCKDLGIDPKKYDTKEAIGKVCTVLKSKGFVMEEAQVNKGKEYATILNSC
FT                   NPNAKGSVAMEHYSDNLNKFYEMFGVKKEAKITGVA"
XX
SQ   Sequence 1863 BP; 590 A; 347 C; 284 G; 642 T; 0 other;
     cattgttcat gacccatcat atcctcaaag gattgtccat gctttgcttg agactcacac        60
     atctttcgct caggttcttt gcaacaactt gcaagaagat gtaattatct acacattgaa       120
     caaccatgag ttgactcctg caaagttaga tttaggtgac agaaccctaa attacagtga       180
     agatgcttat aagaagaaat atttcctttc aaaaactctt gagtgcctcc cagttaacac       240
     acagaccatg tcttatctag acagtatcca gattccctca tggaagatcg actttgccag       300
     aggagaaatt aaaatttctc ctctagctgc ttcttttgca aggtctttgc taacactgga       360
     tctctgtgga gctggaagaa agaagtccca gctcaaagaa gcatctaaat cagaatcaaa       420
     gtgatttatg ctgcattcaa tcacttttta tctgttttat ttaattttct ctttctttca       480
     attttctttt atcttgtctt aaatctttct tgtttagtag gagttagaat aaagataaac       540
     aaaaaaacaa aaaatcaata tataaaaaca aaaaacaaca aaaaaaatca aaaaataaaa       600
     aaccaaaaaa gatcccgaaa gggacgattt tggccaaatt ggttttgttt ttgttttttg       660
     ttttttgttt ttctcttttt attttgtttt atatattttt atttgttttt attttgtttt       720
     tatttattta tttaatacag cacacacaaa agtaattcaa aattaaacac acttaagcaa       780
     gctttaacac actttaacac acttaagcaa accttaacac actttaacac acttaggtaa       840
     atttaataca ttttaacaca aacagacaac aacaaacaaa aaataaaaca ttagatatag       900
     atatgcatct ttataatgtt gcttaaagca gcttttaagc aacacctgtg attttagctt       960
     cttttttaac tccaaacatc tcatagaact tgttaagatt gtcactgtaa tgttccatag      1020
     caacacttcc tttagcatta ggattgcatg agttgagtat agtagcatac tctttccctt      1080
     tgttcacttg tgcttcctcc atcacgaagc ctttgctctt taacacagtg caaacttttc      1140
     ctatagcttc tttagtatca tacttcttag gatcaattcc aagatccttg cattttgcat      1200
     cttggtatat agctagaaca acactgatca tctcgaagct gtcaactgaa gcaataagag      1260
     ggatgctacc tccaagcatt atagcaagtc tcactgattt tgcatcagtc aaaggcagtc      1320
     cataagcttg aaccaaaggg tgagaggcaa tttttgtttt gatagcaagc agattttcgg      1380
     cattagcagt ttcttcaata agcttgactc ttatcatgct atcaagcctt ctaaaagtca      1440
     tatcagtagc tcctatcctg tctgaagtct ttttgatagt gattttacca aaggtaaaat      1500
     cactttgctt gaccaccttc atgatactct gacggttttt caggaatgtc aagcatgaag      1560
     ttatgttcat cttcttgagc aggtcaagat tatcatggca gaaagttttg aagttgaatg      1620
     cagtttgatt ctgatcttct tcaaattcaa cttctgccga ttgggtcaac aaggcaatga      1680
     tattttcctt tgtcaattta accttagaca tgatggctga agaagatttg gtgtgctttc      1740
     aatatatgca atttagggta agaaagtgca actctgtatc ccgtgatcac ttcttattct      1800
     actaatgtga tgatttgtaa gactgagtgc tgaggttttg aataaaattg acacaattgc      1860
     tct                                                                    1863
//