ID HE580236; SV 1; circular; genomic DNA; STD; VRL; 2737 BP. XX AC HE580236; XX DT 15-AUG-2011 (Rel. 109, Created) DT 28-JAN-2013 (Rel. 115, Last updated, Version 3) XX DE Papaya leaf crumple virus complete genome, clone KN6 XX KW complete genome. XX OS Papaya leaf crumple virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2737 RA Ilyas M.; RT ; RL Submitted (13-AUG-2011) to the INSDC. RL Ilyas M., School of Biological Sciences, University of the Punjab (New RL Campus), 54590, PAKISTAN. XX RN [2] RX DOI; 10.1007/s00705-012-1498-1. RX PUBMED; 23065111. RA Ilyas M., Nawaz K., Shafiq M., Haider M.S., Shahid A.A.; RT "Complete nucleotide sequences of two begomoviruses infecting Madagascar RT periwinkle (Catharanthus roseus) from Pakistan"; RL Arch. Virol. 158(2):505-510(2013). XX DR MD5; f28325aafe99ceedbab01fa36aff9715. XX FH Key Location/Qualifiers FH FT source 1..2737 FT /organism="Papaya leaf crumple virus" FT /mol_type="genomic DNA" FT /country="Pakistan:Lahore" FT /isolation_source="Papaya leaf" FT /collected_by="Kiran Nawaz" FT /clone="KN6" FT /db_xref="taxon:928315" FT CDS 121..459 FT /gene="av2" FT /product="AV2 protein" FT /db_xref="GOA:G0W303" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:G0W303" FT /protein_id="CCD22083.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYHHFNARLEGTPPSQLRQPICEPCCCPHCPRHKSKGLDQQAHEP FT KAQDVQDV" FT CDS 281..1051 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:G0W304" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G0W304" FT /protein_id="CCD22084.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGLYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1048..1452) FT /gene="ac3" FT /product="replication enhancer protein" FT /db_xref="GOA:G0W305" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G0W305" FT /protein_id="CCD22085.1" FT /translation="MDSRTGESITAAQAMNGVYIWETPNPLYFKILNHDQRPLNMNHDI FT IDIRVQFNHNLRKRLGIMKCFLGLRIHTRLHLQTWHFLRVFKTQVLRYLDSLGVISINN FT CITAFRHVLYDVLEGTINVIEDHDIKFNIY" FT CDS complement(1193..1600) FT /gene="ac2" FT /product="transcriptional activator protein" FT /db_xref="GOA:G0W306" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:G0W306" FT /protein_id="CCD22086.1" FT /translation="MQHSSPSQSHCTQVPIKVQHRLAKRRAIRRKRVDLECGCSYYVHI FT NCHNHGFTHRGIHHCSSSNEWRVYLGNPKSPLFQDPQPRPKATQHEPRHHRHQGPVQSQ FT PQEETGDNEVFLGLEDPHSFTSSDLAFLKSL" FT CDS complement(1524..2588) FT /gene="ac1" FT /product="replication associated protein" FT /db_xref="GOA:G0W307" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G0W307" FT /protein_id="CCD22087.1" FT /translation="MAPPKRFQVYAKNFFLTYPKCSLTKEEALTQLQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDTLDWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALRVIRELAPKDYVLQFH FT NLNANLDRIFAPPMEVYVSPFLSSSFDQVPEAIEEWASENVMGPAARPLRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALRSWAIHNATFITLTEPL FT YSGTHQGPTQASQA" FT CDS complement(2129..2431) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G0W308" FT /protein_id="CCD22088.1" FT /translation="MGNLIFTCSSSSKENTSAKITGSSTWYPQPGQHISIRTFRELSRA FT QMSSPIWRRMETPSTGESFRSMDDLQEGDNSQPMMLTPKQLIQAVSQRLLESLGN" XX SQ Sequence 2737 BP; 720 A; 561 C; 653 G; 803 T; 0 other; accggatggc cgcgcaaatt ttttaggtgg gccctcaacc aatgaaattc atgctacatg 60 gcctatttat tgcgggggga ccaataaata gacttgctca ccaagtttgt atcgacaaac 120 atgtgggacc cactattgaa tgagtttcca gaaactgttc atgggtttag gtgcatgttg 180 gcagtgaaat acctccagct agtagaaaat acgtattccc cagacactct gggatacgat 240 ttaattaggg atttaatttc agttattagg gctcggaatt atgtcgaagc gaccagcaga 300 tatcatcatt tcaacgcccg cctcgaaggt acgccgccgt ctcaacttcg acagcccata 360 tgcgagccgt gctgctgccc ccattgtccg cgtcacaaaa gcaagggcct ggaccaacag 420 gcccatgaac cgaaagccca ggatgtacag gatgtatagg agcccagatg ttccaagggg 480 ctgtgaaggc ccgtgtaagg tccagtcatt tgagtccaga catgatatcc agcacattgg 540 gaaagtcatg tgtgttagtg atgttactcg tggtattggg ctgacccaca gggttggcaa 600 gaggttctgt gtgaagtccg tctatgtatt gggcaagatt tggatggatg agaacatcaa 660 gactaagaat catacgaata gtgttatgtt tttccttgtt agggatcgta ggcctgttga 720 caagcctcaa gattttggtg aggtttttaa catgtttgat aatgagccca gcacggcgac 780 tgtgaagaat gttcatcgtg acagatatca ggtgttaagg aagtggcatg ccactgtgac 840 aggcggttta tacgcatcga aggagcaggc tctcgtgaag aagtttatta gggtcaataa 900 ttatgttgtg tacaaccagc aagaggctgg caagtatgag aatcatactg agaatgcatt 960 gatgttgtat atggcgtgta cgcacgcctc taaccctgtg tatgctacat tgaagatacg 1020 gatctacttc tatgattcag tatcgaatta ataaatattg aactttatat catgatcctc 1080 aattacatta attgtgccct caagtacatc atataataca tgtctgaaag ccgtaataca 1140 attatttata ctaattacgc ctaaactatc taaatatctt aaaacttgag tcttaaagac 1200 tcttaagaaa tgccaagtct gaagatgtaa acgagtgtgg atcctcaagc ccaagaaaca 1260 cttcattatc cccagtctct tcctgaggtt gtgattgaac tggaccctga tgtcgatgat 1320 gtcgtggttc atgttgagtg gcctttggtc gtggttgagg atcttgaaat agaggggatt 1380 tggggtttcc cagatataca cgccattcat tgcttgagct gcagtgatgg attcccctgt 1440 gcgtgaatcc atggttgtgg cagttgatgt gtacgtagta tgagcagcca cactcgaggt 1500 caaccctctt acgccggatg gctctacgct tggctagcct gtgttggacc ttgatgggta 1560 cctgagtaca gtggctctgt gagggtgatg aatgttgcat tatgtatagc ccacgacctc 1620 aatgctgagt tcttttcctc atcgaggtat tctttatagc tggaattggg cccaggattg 1680 cagaggaaga tagtgggtat acctccttta atttgaactg gtttcccgta cttggtgtta 1740 ctttgccagt ccctctgggc ccccatgaac tctttaaagt gctttaggta gtgggggtct 1800 acgtcatcaa tgatgttata ccatgcatca tttgaatata tcttgggact cagatctaaa 1860 tggccacaca ggtaattgtg tggtcccaaa gacctggccc acattgtctt gcccgtacga 1920 ctatcaccct caatgacaat acttttaggt ctcaatggcc gcgcagcggg acccatcaca 1980 ttttcagagg cccattcctc tatggcctct ggaacttgat cgaaggaaga tgaaagaaaa 2040 ggggaaacat aaacctccat tggaggtgca aaaatcctat ctaaattagc attaagatta 2100 tgaaattgta agacataatc ctttggggct aattccctaa tgactctaag agcctctgac 2160 ttactgcctg tattaattgc tttggcgtaa gcatcattgg ctgactgttg tccccctctt 2220 gcagatcgtc catcgatctg aaactctccc cagtcgaggg tgtctccatc cttctccata 2280 taggacttga catctgagct cgacttagct ccctgaatgt tcggatggaa atgtgctgac 2340 ctggttgggg ataccaggtc gaagaacctg ttattttggc acttgtattt tccttcgaac 2400 tggatgagca cgtgaagatg aggttcccca ttttcgtgga gctctctgca gatttttatg 2460 tattttttat ttactggggt ttgtaggttc tgaagttggg tgagtgcctc ttctttagta 2520 agagagcatt ttggataagt gagaaagaaa tttttggcat atacttgaaa acgcttggga 2580 ggagccattg acttggtcaa tcggtactca gcactagtcc tatggcaatt ggtgatcagt 2640 actcaatata tagtgagtac caaatggcag aattgtaatt tggaaaagaa aattacttta 2700 attcaaattc ccataaagcg gccatccgta taatatt 2737 //