ID   HE575406; SV 1; linear; genomic RNA; STD; VRL; 687 BP.
XX
AC   HE575406;
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DT   10-JAN-2012 (Rel. 111, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Sweet potato chlorotic stunt virus RNase3 gene for ribonuclease III,
DE   segment RNA 1, genomic RNA, strain busia
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KW   .
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OS   Sweet potato chlorotic stunt virus
OC   Viruses; Riboviria; Closteroviridae; Crinivirus.
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RN   [1]
RP   1-687
RA   Otto B.;
RT   ;
RL   Submitted (19-JUL-2011) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Chatham Maritime,
RL   Kent, ME7 4BT, UNITED KINGDOM.
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RN   [2]
RA   Wasswa P., Otto B., Gibson R., Maruthi M.;
RT   "'The occurrence and characteristics of a mild strain of Sweet potato
RT   chlorotic stunt virus'";
RL   Unpublished.
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DR   MD5; 9f5eaf64f618b4ead3c0ccbae66d381b.
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FH   Key             Location/Qualifiers
FH
FT   source          1..687
FT                   /organism="Sweet potato chlorotic stunt virus"
FT                   /segment="RNA 1"
FT                   /strain="busia"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Busia"
FT                   /PCR_primers="fwd_name: RNase3-F, fwd_seq:
FT                   araccaaagtagkgccacatcaa, rev_name: RNase3-R, rev_seq:
FT                   tcgtcgtttcgyaagattttcg"
FT                   /db_xref="taxon:81931"
FT   CDS             1..687
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="RNase3"
FT                   /product="ribonuclease III"
FT                   /function="RNAi silencing"
FT                   /db_xref="GOA:G8A4L8"
FT                   /db_xref="InterPro:IPR036389"
FT                   /db_xref="UniProtKB/TrEMBL:G8A4L8"
FT                   /protein_id="CCC58176.1"
FT                   /translation="MVPIYSDVSEESKLTVFGSRHRLDSIVHSICTSDDRDRYEILGDW
FT                   AVASYVTRMLTDLFKHNADAESLSLLRAHNISNVMFAKVMVESKLFEDFYLWLTPDQMQ
FT                   LCRKTFAGGRSLYEVNVKFLANYFERIVGWLVVHDCSESVEKFLDLFLKPHMSFYIKKP
FT                   ARSILEEWAMKNNKRLDIHTGEYNVNKVVYVLVDGQEVSRASDLISKKRAISKAVSFAV
FT                   EALNLS"
XX
SQ   Sequence 687 BP; 186 A; 115 C; 159 G; 227 T; 0 other;
     atggttccga tttattccga cgtttccgag gaaagcaaac ttactgtctt cggaagtcgt        60
     catagattgg attctattgt acacagcatt tgtacttcag atgatagaga cagatatgag       120
     attttaggtg attgggctgt cgcatcgtat gtcacgcgta tgctgacaga tctcttcaaa       180
     cataatgctg atgctgaatc tctgtcgttg cttcgcgctc ataatatttc taatgttatg       240
     ttcgcaaaag tcatggtaga atcaaaactc ttcgaagatt tttatctttg gttgactccc       300
     gaccaaatgc agttgtgtag gaagactttc gccggtggga gaagtctgta tgaggtcaat       360
     gttaaattct tagccaacta ttttgagaga atcgttggtt ggttggttgt gcatgattgt       420
     tcagaaagtg ttgagaagtt tcttgatctt ttcttgaaac ctcatatgtc tttctacatt       480
     aagaaacctg cccgttctat tcttgaagaa tgggccatga agaataacaa gagacttgac       540
     attcatactg gtgagtataa tgtcaacaag gtagtttatg tcctagtcga cggacaagag       600
     gtcagtcggg ctagtgattt gattagtaag aagagagcaa tttcaaaagc ggtttctttc       660
     gctgttgaag ctctaaatct gagttga                                           687
//