Dbfetch
ID GU997692; SV 1; circular; genomic DNA; STD; VRL; 2573 BP. XX AC GU997692; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Sida golden mottle virus segment DNA-B, complete sequence. XX KW . XX OS Sida golden mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2573 RA Al-Aqeel H.A., Polston J.E.; RT "Characterization of a new begomovirus isolated from Sida santaremensis RT Monteiro in Florida"; RL Unpublished. XX RN [2] RP 1-2573 RA Al-Aqeel H.A., Polston J.E.; RT ; RL Submitted (13-MAR-2010) to the INSDC. RL Biotechnology, Kuwait Institute for Scientific Research, P.O. Box 24885, RL Kuwait City Safat 13109, Kuwait XX DR MD5; eff33616c92da43c80bd524474871db3. DR EuropePMC; PMC4802622; 27000806. XX FH Key Location/Qualifiers FH FT source 1..2573 FT /organism="Sida golden mottle virus" FT /segment="DNA-B" FT /host="Sida santaremensis" FT /mol_type="genomic DNA" FT /country="USA:Bradenton, Florida" FT /collection_date="Jan-1997" FT /db_xref="taxon:759390" FT gene 357..1133 FT /gene="BV1" FT CDS 357..1133 FT /codon_start=1 FT /gene="BV1" FT /product="NSP" FT /db_xref="GOA:D6Q1S2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D6Q1S2" FT /protein_id="ADF97241.1" FT /translation="MIMYPSKIKRGFYYPYRRFNTRSNLFNRSTAVKRHDARRRRGRSV FT KPTDEPKMSAQSIHENQYGSDFVMAHNSAISTFISFPDLGKMEPGRSRSYIKLKRLRFK FT GTVKIERVQSDLNMDGTVPKIEGVFSLVVVVDRKPHLGPSGCLHTFDELFGAIIHSHGN FT LSIVPSLKDRYYIRHVFKRVLSLENDTLMVDVEGSTSLSDRRFNCWSTFKDVDRDSCKG FT VYDNISKNALLIYYCWVSETPSKASNYVSFDLDYVG" FT gene complement(1195..2076) FT /gene="BC2" FT CDS complement(1195..2076) FT /codon_start=1 FT /gene="BC2" FT /product="MP" FT /db_xref="GOA:D6Q1S3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D6Q1S3" FT /protein_id="ADF97242.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRVGLRGPIEIRPGESWASRSTIGTAQSDAE FT SEVENELYPYRHLNRLGTSVLDPGESASIVGAQRAESNITMSMGQLNEIVRTTVRECIN FT SNCQVNQAKSLK" XX SQ Sequence 2573 BP; 658 A; 516 C; 590 G; 809 T; 0 other; accggatggc cgcgcgcccc cccccccctc acgcgcgctc ccctggtgct gttctggtac 60 gcgctctctc attggtgctg gtccttcacg cgcctttgtt tgagtggcct ttaattcaaa 120 ttaaaggata atactttctc gcgcgaatgg cttttatgat ttgaattatt gtcgcgcgat 180 gactgactat ggcccattgt actatgtgaa ggacgtggct atatttggac catgtcgctg 240 agtttatttg tgtctaacgt taaatgaatt gtctataaaa ttaagtggtc atgtgcgtca 300 tgtacaacca actcagcgtt taaccacgtt tatattgttt agtccattat tattgtatga 360 taatgtatcc ttctaagatt aaacgtggtt tttattatcc ttatcgacga tttaatacac 420 gtagcaattt gtttaaccgt tcaaccgctg tgaaacgaca tgatgcgaga cgtcgaagag 480 gtcgatctgt caagcccact gatgagccca agatgtcggc ccaatccata catgagaatc 540 agtatggctc tgattttgtc atggcccata attcagctat ctctacgttc atcagtttcc 600 cagacttggg caagatggaa ccgggtcgaa gtaggtcata tatcaagttg aaacgacttc 660 gtttcaaagg gactgtgaag attgaacgtg tgcaatcgga tctgaacatg gacgggactg 720 tccccaaaat tgaaggagtt ttctcccttg ttgttgttgt ggatcgtaaa ccccacttgg 780 gtccaagtgg ttgtctgcat acatttgacg agttgttcgg agcaatcatt cacagtcatg 840 gcaatctcag cattgtccct tctctgaaag accgttatta tattcgccac gtgttcaaac 900 gtgtattgtc attggaaaat gacacgctga tggtcgacgt cgaaggatct acttctctat 960 ctgacaggcg ttttaattgt tggtccactt ttaaagacgt ggatcgtgat tcatgcaagg 1020 gtgtttatga taatataagc aagaacgctc tgctaattta ttattgctgg gtgtccgaaa 1080 cgccttcaaa ggcctctaat tatgtatctt ttgatcttga ctatgttggc taactcaata 1140 aaatttgttt aaccaaattt atttatctta ttatgatata tcaaaagata acatttattt 1200 cagtgatttg gcctgattaa cctgacaatt actattaata cattcccgga ctgtagttct 1260 gactatctca ttcaactggc ccattgacat tgtgatgttt gactccgctc tctgggctcc 1320 cacaatggaa gcagactctc ctgggtctag aacgctggtc cccagtctgt ttaggtgtct 1380 gtatggatag agttcgttct ccacttctga ttccgcatct gactgggccg ttcctattgt 1440 acttctggaa gcccatgatt caccaggcct gatctcgatt gggccgcgta acccaaccct 1500 ggacatggac gcgcatctga tgggcttcct ctcccatttc ccatagtcca catgagaaaa 1560 gtccacatct ttgtctgtga actgtttgga caggatcttc actgttggtg cccggaaggg 1620 gatgtcgacc gagtgttttg ctgtggacaa tttcagtttc cctttgaatt tggcgaagtg 1680 agtccgttga tgaacatttg tatcgcaaac gcgatagtac aacttccatg gaattgggtc 1740 ttttaatgag aagaacgaag ccgagaaata gtggagatct atgttgcacc tgatcggaaa 1800 agtccacgac gcctgtaaag actcattgtc tgtcattctt ttgtcgtgaa tctccacgat 1860 tactgaccct gtggcgttga tcggaacttg ttgtctgtat tctatgacgc aatggtctat 1920 cttcatgcag ctacgactga gtctagctgt taattgcgac gccgttgaag gaaattgcag 1980 tattatctca gttaggtcat gagaaagttg atactcgtct cggtgagatt ctatgtaatt 2040 gaaagcgttc ggaggattga ccaactgaga atccatatga agaagaaagg ccgcgcagcg 2100 gaactgattg ctgaagttga atcggaaaga agatgaacaa ctgactatga agatgatcaa 2160 atctggaaag ccctcctttg atctcgaagg aggtaaatgt ataactttct atctgggttt 2220 gagaatttca gatgtttaag aagatcagtt gtttctgacg gtttctgtgt ttgagaatgc 2280 ttgaatatgg agatatatga agaataattg tttttgagaa aggaaagagt gtttagtaag 2340 agtttaatag aactcagaaa atggaagagg ttgtatgtga tcccagactt gttgggattc 2400 tggtatttat attggtaaag tgttcatcca gtggtggtat ttctgtaaat atgggatgtt 2460 ccccccttag ctctctcgct caaaagtctt aacaattggg ggaactgggg gaacttatat 2520 agtagaagtt ccataaggca atgcaacacg tggcggccat ccgttataat att 2573 //