ID GU997691; SV 1; circular; genomic DNA; STD; VRL; 2611 BP. XX AC GU997691; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Sida golden mottle virus segment DNA-A, complete sequence. XX KW . XX OS Sida golden mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2611 RA Al-Aqeel H.A., Polston J.E.; RT "Characterization of a new begomovirus isolated from Sida santaremensis RT Monteiro in Florida"; RL Unpublished. XX RN [2] RP 1-2611 RA Al-Aqeel H.A., Polston J.E.; RT ; RL Submitted (13-MAR-2010) to the INSDC. RL Biotechnology, Kuwait Institute for Scientific Research, P.O. Box 24885, RL Kuwait City Safat 13109, Kuwait XX DR MD5; 4316b8f2ac93e032cc74966086520e8a. DR EuropePMC; PMC4802622; 27000806. XX FH Key Location/Qualifiers FH FT source 1..2611 FT /organism="Sida golden mottle virus" FT /segment="DNA-A" FT /host="Sida santaremensis" FT /mol_type="genomic DNA" FT /country="USA:Bradenton, Florida" FT /collection_date="Jan-1997" FT /db_xref="taxon:759390" FT gene 195..950 FT /gene="AV1" FT CDS 195..950 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D6Q1R7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D6Q1R7" FT /protein_id="ADF97236.1" FT /translation="MSKRDGSWRSMEGISKVKRTLNFSPRGGGGPKMSRAAEWVNRPMY FT RKPRIYRTLKTPGVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVYNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(947..1345) FT /gene="AC3" FT CDS complement(947..1345) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /db_xref="GOA:D6Q1R8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D6Q1R8" FT /protein_id="ADF97239.1" FT /translation="MDSRTGELITVPQAENGVYIWEIENPLYFTMYQIEDPLYTNTRIY FT TLQIRFNHNLRKALHLHKAFLNFQVWTISMTASGSTYLARFKRLVNLYLDRLGVISINN FT VIRAVRFATDRSYVTYVPENHVIKFKIY" FT gene complement(1092..1481) FT /gene="AC2" FT CDS complement(1092..1481) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /db_xref="GOA:D6Q1R9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D6Q1R9" FT /protein_id="ADF97238.1" FT /translation="MRSSSPSHPPSIKQKHKQAKKRAIRRRRIDLECGCSIYFHIGCTG FT HGFTHRGTHHCTSGREWRVYLGDRKSPLFHDVPNRRPVVHEHQNIHATNTIQPQPEESV FT ASPQSLPELPSLDDIDDSFWVDLFS" FT gene complement(1393..2478) FT /gene="AC1" FT CDS complement(1393..2478) FT /codon_start=1 FT /gene="AC1" FT /product="REP protein" FT /db_xref="GOA:D6Q1S0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D6Q1S0" FT /protein_id="ADF97237.1" FT /translation="MPRKGSFSVKAKNYFLTYPQCSITKEEALSQLQTLNTPVNKKFIK FT ICRELHENGEPHIHVLIQFEGKYNCTNNRFFDLVSPTSSVHFHPNIQGAKSSSDVKSYV FT EKDGDTIEWGVFQIDGRSARGGQQTSNDAAAEALNSGTKEAALKIIREKLPEKYLFQYH FT NLSSNLDRIFSKSPDPWSPPFPLSSFTAVPEEMQDWADSYFGRGSAARPDRPVSIIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEVEYNVIDDVAPHYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENTGLKNWTLKNALFITLT FT SALYQTETQASQEEGHQETAD" FT gene complement(2064..2321) FT /gene="AC4" FT CDS complement(2064..2321) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D6Q1S1" FT /protein_id="ADF97240.1" FT /translation="MGSLISMCSSSSRGSTTARITDSSIWCPQPVQYISIRTYRELNPA FT PTSSPTSRKTGTPLNGECSRSTEEVLAEVSKHLMMQPPRH" XX SQ Sequence 2611 BP; 654 A; 588 C; 627 G; 742 T; 0 other; accggatggc cgcgcgcccc ccctgatgcc gtacattcac gcgcgatctt taatttgaat 60 taaagatgaa ccagacgctc tcgtccaatc ataacgcgtc tgacgagcct aaatattttg 120 aacaacttgg gcgctaagtt gttgggtaac cgttataaat ttaaaaggat ttggcccact 180 ttctttaact caaaatgtct aagcgcgatg gctcttggcg ctctatggag ggaatttcaa 240 aagtgaaacg tactctgaat ttctcccctc gtggaggagg tgggccaaaa atgtcaaggg 300 ccgccgaatg ggtgaacagg cccatgtaca ggaagcccag gatctaccgg acgctaaaga 360 cacctggtgt gcccagagga tgtgaaggcc cgtgcaaggt ccagtcttat gaacagcgcc 420 acgacatatc ccatgtgggt aaggtcatgt gcatctctga cgtgacacgt ggtaatggca 480 ttacccatcg cgtgggtaag cgtttttgtg ttaagtctgt gtatatcctt ggtaagatct 540 ggatggacga gaacatcaag ctcaagaacc acacgaacag tgtcatgttc tggttggtca 600 gagaccgtag accctatgga actccaatgg atttcggcca ggtgttcaac atgttcgaca 660 acgagccaag cactgctacg gtgaagaatg atctacgcga tcgttaccag gtcatgcaca 720 agttctatgg caaggtgacc ggtggacagt atgccagcaa cgagcaggct atagttaaga 780 ggttctggaa ggtctacaat catgtggtct acaatcatca agaggctggc aagtacgaga 840 atcatacaga gaacgccctg ttattgtata tggcatgtac tcatgcatct aaccccgtgt 900 atgcaacgct taagatccga atctatttct acgattcgat cacaaattaa taaattttga 960 attttattac atgattttct ggaacataag ttacatacga tctgtctgtc gcgaatcgta 1020 cagctctgat tacattgtta attgaaatca cgcctaacct atctaaatac aaattaacta 1080 agcgcttaaa tctagctaaa taagtcgacc cagaagctgt catcgatatc gtccagactt 1140 ggaagttcag gaaggctttg tggagatgca acgctttcct caggttgtgg ttgaatcgta 1200 tttgtagcgt gtatattctg gtgttcgtgt acaacgggtc ttctatttgg tacatcgtga 1260 aatagagggg attttctatc tcccagatat acacgccatt ctctgcctga ggtacagtga 1320 tgagttcccc tgtgcgtgaa tccatgcccg gtgcagccta tgtggaagta aatggagcaa 1380 ccgcactcta gatcaatccg ccgtctcctg atggccctct tcttggcttg cttgtgtttc 1440 tgtttgatag agggcggatg tgagggtgat gaagagcgca ttcttcaggg tccaattctt 1500 tagacctgtg ttttcctctt tgtctaggaa gtctttatag ctggcaccct cacccggatt 1560 gcaaagcacg attgatggaa tcccgccttt aatttgaact ggtttgccgt atttgcaatt 1620 tgactgccag tccttctggg cccccagaag ttctttccag tgcttcaact ttagatagtg 1680 cggtgcgacg tcatcaatga cgttatactc cacttcattt gaatataccc ggggattgaa 1740 gtccagatgt ccactgagat aattatgtgg gcctaacgca cgagcccaca ttgtcttacc 1800 tgtccttgag tcaccttcca ctatgatact tactggtcta tctggccgcg cagcggaacc 1860 tctcccaaaa taactgtccg cccagtcttg catttcttca ggaacggcag tgaaagagga 1920 gaggggaaac ggaggagacc atggatccgg agacttactg aaaatcctat cgaggttact 1980 ggataggttg tgatattgga aaagatattt ttccggcaac ttttctctga tgattttcag 2040 tgccgcctcc tttgttccag aattcaatgc ctcggcggct gcatcattag atgtttgctg 2100 acctccgcga gcacttcttc cgtcgatctg gaacactccc cattcaatgg tgtccccgtc 2160 tttctcgacg taggacttga cgtcggagct ggatttagct ccctgtatgt tcggatggaa 2220 atgtactgaa ctggttgggg acaccagatc gaagaatctg ttattcgtgc agttgtactt 2280 cccctcgaac tggatgagca catggatatg aggctcccca ttttcgtgaa gctctctgca 2340 aattttgatg aacttcttgt tcaccggagt atttaatgtt tgtaattggg aaagtgcttc 2400 ctctttggtg atggagcact gcggatatgt gaggaaatag tttttggctt taactgagaa 2460 agaacccttt cgtggcattt ttgtaaatat aggatgttcc ccccttagct ctctcgctca 2520 aaagtctaga caattggggg aactggggga acttatatag tagaagttcc taaaggcaat 2580 gcaacacgtg gcggccatcc gttataatat t 2611 //