ID GU990614; SV 1; linear; genomic DNA; STD; VRL; 2615 BP. XX AC GU990614; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Okra yellow mosaic Mexico virus - [Herissantia:Colima 1] coat protein DE (AV1), replication enhancer protein (AC3), transactivator protein TrAP DE (AC2), replication protein (AC1), and AC4 (AC4) genes, complete cds. XX KW . XX OS Okra yellow mosaic Mexico virus - [Herissantia:Colima 1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2615 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT "New Strains of Okra Yellow Mosaic Mexico Virus Isolated from Weeds"; RL Unpublished. XX RN [2] RP 1-2615 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (09-MAR-2010) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa San Jose #2055, San Luis Potosi 78216, RL Mexico XX DR MD5; f14fb7df413838a79e6701f8574188f3. XX FH Key Location/Qualifiers FH FT source 1..2615 FT /organism="Okra yellow mosaic Mexico virus - FT [Herissantia:Colima 1]" FT /host="Herissantia" FT /mol_type="genomic DNA" FT /country="Mexico:Colima" FT /collection_date="01-Jan-2010" FT /db_xref="taxon:756895" FT gene 194..949 FT /gene="AV1" FT CDS 194..949 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="capsid protein; CP; AR1" FT /db_xref="GOA:D6PZQ6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D6PZQ6" FT /protein_id="ADF58306.1" FT /translation="MPKRDLPWRSIVGTSKVSRNSNYSPRAGSGPRVNKASEWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIVN" FT gene complement(946..1344) FT /gene="AC3" FT CDS complement(946..1344) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="rep-interacting protein; AC3; AL3" FT /db_xref="GOA:D6PZQ7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D6PZQ7" FT /protein_id="ADF58310.1" FT /translation="MDSRTGELITVPQAENGVYIWEIENPLYFKTYRVEEPLYTRTRVY FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFKHLVNMYLDDLGVISINN FT VIRAVSFATDRSYVNHVLENHSIKFKLY" FT gene complement(1091..1480) FT /gene="AC2" FT CDS complement(1091..1480) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein TrAP" FT /note="transcription factor; regulation of virus late" FT /db_xref="GOA:D6PZQ8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D6PZQ8" FT /protein_id="ADF58309.1" FT /translation="MQSSSPSYPPSIKLAHRQAKRKSIRRRRIDLECGCSIYFHIGCTG FT HGFTHRGTHHCTSGREWRLYLGDRKSPIFQDVPSRGTIVYENQSIPRSDTVQPQPEESV FT ASPQSLPELPSLDDIDDSFWVNLFS" FT gene complement(1392..2480) FT /gene="AC1" FT CDS complement(1392..2480) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /note="RCR-initiator protein" FT /db_xref="GOA:D6PZQ9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D6PZQ9" FT /protein_id="ADF58307.1" FT /translation="MPQHPKRFQINQKNYFLTYPQCSLTKEEALSQLQTLKTPVNKKFI FT KICRELHEDGQPHLHVLIQFEGKYRCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSY FT IDKDGDTIEWGQFQVDGRSARGGQQTVNDTYAKALNASSAEVALIIIREEQPQHFFLQH FT HNLVANANRIFQKPPEPWVPPFPLSSFANVPDAMQEWADEYFGRGSAARPIRPVSLIVE FT GDSRTGKTMWARSLGPHNYLSGHLDFNSRVFSNEVEYNVIDDIAPQYLKLKHWKELIGA FT QRDWQSNCKYGKPVQIKGGIPSIVLCNPGDGASYKDFLDKEENRALRNWTIHNAIFITL FT ISALYQISAQASQTEIDQEEAD" FT gene complement(2063..2320) FT /gene="AC4" FT CDS complement(2063..2320) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D6PZR0" FT /protein_id="ADF58308.1" FT /translation="MGNLICTSSSNSRGNTGARITDSSIWCPQPGQHISIRTFRELNPA FT PTSSPTLTKTETPLNGDSFKSTGDLLEEVSRQLTTHMPRR" XX SQ Sequence 2615 BP; 643 A; 565 C; 628 G; 779 T; 0 other; accggatggc cgcgcgattt ttttcccccc acgcgcgtac gctcctcttt aatttgaatt 60 aaagcgatcc gctttcgttt cgtccaatca tgtaacgcct gacgagctta gatattttaa 120 acaacttggg cgctaagttg ttgggttccg gttataaatt aaagaggctt tggcccacta 180 catttaattc aaaatgccta agcgcgatct cccatggcgc tcgatcgtgg gcacttcaaa 240 ggtgagtcgc aattctaatt attctcctcg tgcaggtagt gggccaagag ttaacaaggc 300 ctctgaatgg gtaaacaggc ccatgtacag gaagcccagg atttatcgga cattgagaac 360 gcccgacgtt ccaagaggtt gtgaagggcc ttgcaaagtc cagtcttatg agcagcgaca 420 tgatatctca catgtcggta aggtaatgtg tatttctgat gtcacacgtg gtaatggtat 480 cacccaccgt gtgggtaagc gtttctgtgt taaatccgtc tatattctcg gtaagatctg 540 gatggatgag aacatcaagc tcaagaacca cacgaacagt gttatgttct ggttggttag 600 ggaccgtaga ccgtatggca cgcctatgga tttcggtcaa gtgttcaaca tgttcgacaa 660 cgagcccagc actgcgacgg tgaagaacga tctacgcgat cgctaccagg tgatgcacaa 720 gttctacggc aaggtgacag gtggacagta tgccagcaac gagcaggcta tagtcaagcg 780 cttctggaag gtcaacaatc atgtggttta caaccatcag gaggctggca agtacgagaa 840 tcacacggag aacgctttgt tattgtacat ggcatgtacc catgcctcta accctgtata 900 tgcaacgctt aagatcagga tctatttcta cgattcgatc gtgaattaat aaagtttgaa 960 ttttattgaa tgattttcca gtacatggtt tacatacgac ctgtctgttg cgaaactaac 1020 agctctgatt acattattaa ttgaaatgac gcctaaatca tctaaataca tattaactaa 1080 atgtttaaac ctagctaaat aagttgaccc agaagctgtc atcgatgtcg tccagacttg 1140 gaagttcagg taggctttgt ggagatgcaa cgctctcctc aggttgtggt tgaaccgtat 1200 ctgaacgtgg tatactctgg ttctcgtata caatggttcc tctactcggt acgtcttgaa 1260 atatagggga ttttcgatct cccagatata gacgccattc tctgcctgag gtacagtgat 1320 gagttcccct gtgcgtgaat ccatgccctg tgcaacctat gtggaagtat atggagcacc 1380 cgcactccag atcaatccgc ctcctcctga tcgatttccg tttggcttgc ctgtgcgcta 1440 atttgataga gggcggatat gagggtgatg aagattgcat tatggatggt ccagttcctg 1500 agtgctctgt tttcctcttt gtcgaggaaa tctttatagc tggcaccgtc acctggattg 1560 caaagcacga ttgatgggat acctccttta atttggactg gcttgccgta cttacagttt 1620 gactgccagt ctctttgggc cccgattaat tctttccagt gctttagctt tagatattgc 1680 ggtgcgatgt catcaatgac gttatactcc acttcatttg agaacactct ggaattgaag 1740 tctaggtgtc cactaaggta gttatgtggg cctaacgaac gagcccacat cgtcttccct 1800 gtcctcgaat caccttctac tatgagactt actggtctaa ttggccgcgc agcggaaccc 1860 ctcccaaaat attcatcggc ccactcttgc atcgcgtctg gtacgttagc gaacgaggag 1920 agtggaaacg gagggaccca tggttccgga ggcttttgga atattctgtt ggcattagct 1980 acgaggttat gatgttgcaa gaagaaatgt tgcggttgtt cttctctgat tattatcaga 2040 gctacctctg cagatgatgc attcaacgcc ttggcatatg tgtcgttaac tgtctgctga 2100 cctcctctag cagatctccc gtcgacttga aactgtcccc attcaatggt gtctccgtct 2160 ttgtcaatgt aggacttgac gtcggagctg gatttagctc cctgaatgtt cggatggaaa 2220 tgtgctgacc tggttgggga caccagatcg aagaatctgt tattcgtgca cctgtatttc 2280 ccctcgaatt ggatgaggac gtgcagatga ggttgcccat cttcgtgtaa ttctctgcag 2340 atcttgatga atttcttgtt tactggtgtt tttagggttt gtaattggga aagtgcttcc 2400 tctttagtaa gagagcattg tgggtatgtg aggaaataat ttttctgatt tatttgaaaa 2460 cgttttggat gttgtggcat ttttgtaaat aagagggtgt gtaccagttg agctctctca 2520 aaacttggtg aatgaattgg tacacaggta cacaatatat agtagaactc tcattaacgg 2580 atttgcaaca cgtggcggcc atccgatata atatt 2615 //