ID GU990613; SV 1; linear; genomic DNA; STD; VRL; 2635 BP. XX AC GU990613; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Okra yellow mosaic Mexico virus - [Sida] coat protein (AV1), replication DE enhancer protein (AC3), transactivator protein TrAP (AC2), replication DE protein (AC1), and AC4 (AC4) genes, complete cds. XX KW . XX OS Okra yellow mosaic Mexico virus - [Sida] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2635 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT "New Strains of Okra Yellow Mosaic Mexico Virus Isolated from Weeds"; RL Unpublished. XX RN [2] RP 1-2635 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (09-MAR-2010) to the INSDC. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, A.C., Camino a la Presa San Jose #2055, San Luis Potosi 78216, RL Mexico XX DR MD5; d05ecd2f9e5a37586b11a37b91fa4e1c. XX FH Key Location/Qualifiers FH FT source 1..2635 FT /organism="Okra yellow mosaic Mexico virus - [Sida]" FT /host="Sida" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="01-Jan-2010" FT /db_xref="taxon:361723" FT gene 195..950 FT /gene="AV1" FT CDS 195..950 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="capsid protein; CP; AR1" FT /db_xref="GOA:D6PZQ1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D6PZQ1" FT /protein_id="ADF58301.1" FT /translation="MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRVNKASEWVNRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVCNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT gene complement(947..1345) FT /gene="AC3" FT CDS complement(947..1345) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="rep-interacting protein; AC3; AL3" FT /db_xref="GOA:D6PZQ2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D6PZQ2" FT /protein_id="ADF58305.1" FT /translation="MDSRTGDIITVPQAENGVYIWTVDNPLYFRMYRVEDPIYTNSRIY FT NIQIRFNHNLRRALHLHKAYLNFQVWTISMTASGSTYLARFRHLVNLYLDRLGVISINN FT VIRAVRFATDRSYINHVLENHSIKFKLY" FT gene complement(1092..1481) FT /gene="AC2" FT CDS complement(1092..1481) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein TrAP" FT /note="transcription factor; regulation of virus late" FT /db_xref="GOA:D6PZQ3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D6PZQ3" FT /protein_id="ADF58304.1" FT /translation="MQSSSPSQPPSIKTAHRQAKKRAIRRRRIDIKCGCSIYFHINCTG FT HGFTHRGYHHCTSGREWRLYLDGRQSPLFQDVPSGGSNIHQQQDIQYPDKVQPQPEESI FT ASPQSLPELPSLDDIDDSFWVDLFS" FT gene complement(1393..2478) FT /gene="AC1" FT CDS complement(1393..2478) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /note="RCR-initiator protein" FT /db_xref="GOA:D6PZQ4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D6PZQ4" FT /protein_id="ADF58302.1" FT /translation="MPPPNKFRVQSKNYFLTYPQCSLSKEEALSQLQTLNTPVNKKFIK FT ICRELHEDGQPHLHVLIQFEGKYQCTNSRFFDLVSSTRSIHFHPNVQGAKSSSDVKSYI FT DKDGDTIEWGQFQVDGRSARGGQQTVNDTYAKALNASSAEVALIVIREEQPQHFFLQHH FT NLVANANRIFQKPPEPWVPPFPLSSFTNVPDAMQEWADEYFGRGSAARPIRPVSLIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNSRVFSNEVEYNVIDDIAPQYLKLKHWKELIGAQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDYLDKEENTSLKNWTIKNAIFITLT FT TALYQNSTQTSQEEGDQEEAD" FT gene complement(2064..2321) FT /gene="AC4" FT CDS complement(2064..2321) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D6PZQ5" FT /protein_id="ADF58303.1" FT /translation="MGNLICMFSSNSKANTNARIADSSTWCPQPGQYISIRTYRELNPA FT PTSSPTLTKTETPLNGGSFKSTADLLEEVSRQLTTHMPRR" XX SQ Sequence 2635 BP; 649 A; 582 C; 626 G; 778 T; 0 other; accggatggc cgcgcgattt tttcaccccc ctcgcgcgtg cgttcctctt taatttgaat 60 taaagcgttc cgctttcgtc tcgaccaatc atgtaacgcc tgacgagctt agatatttta 120 aacaacttgg gcgctaagtt gttgggtgtc ggttataaat taaagaggct ttggcccact 180 ggatttaatt caaaatgcct aagcgcgatc tcccatggcg ctcgatcgcg ggaacctcaa 240 aggtgagtcg caatgccaat tattcccccc gtgcaggaag tgggccaaga gttaacaagg 300 cctctgaatg ggtaaacagg cccatgtaca ggaagcccag gatctaccgg acgttgagaa 360 cgcccgacgt tccaagagga tgtgaaggcc cttgcaaagt ccagtcctat gaacagcgac 420 acgatatctc ccatgttggt aaggtcatgt gtatatctga tgtcacacgt ggcaatggta 480 tcacccaccg tgtgggtaag cgtttctgtg tgaagtccgt gtatattctc ggtaagatct 540 ggatggatga gaatatcaag ctcaagaacc acacgaacag tgttatgttc tggttggtca 600 gagaccgtag accgtatggc acacctatgg atttcggtca agtgttcaac atgttcgaca 660 acgagcccag cactgctacg gtgaagaacg atctacgcga tcgttaccag gtcatgcaca 720 agttctacgg caaggtgaca ggtggacagt atgccagcaa cgagcaggcg atagtcaagc 780 gcttctggaa ggttaacaat catgtggttt gcaatcatca ggaggctggc aagtatgaga 840 atcacacgga gaacgctttg ttactgtata tggcatgtac ccatgcctcc aaccctgtgt 900 atgcaacgct taagatccgg atctatttct acgattcgat catgaattaa taaagtttga 960 attttattga atgattttcc agtacatgat taatatacga cctgtctgtt gcgaaacgaa 1020 cagctctaat tacattgtta atggaaataa cacctaatcg atctaaatac agattaacta 1080 aatgcctaaa cctagctaaa taagtcgacc cagaagctgt catcgatatc gtccagactt 1140 ggaagttcag gtaggctttg tggagatgca atgctctcct caggttgtgg ttgaacctta 1200 tctggatatt gtatatcctg ctgttggtgt atattggatc ctccactcgg tacatcctga 1260 aatagagggg attgtctacc gtccagatat agacgccatt ctctgcctga ggtacagtga 1320 tgatatcccc tgtgcgtgaa tccatgcccc gtgcagttta tgtggaagta gatggagcac 1380 ccgcacttta tatcaatccg cctcctcctg atcgccctct tcttggcttg tctgtgtgct 1440 gttttgatag agggcggttg tgagggtgat gaagattgca ttcttgatcg tccagttttt 1500 gagtgatgtg ttttcctctt tgtcaaggta atctttatag ctggcaccct cacctggatt 1560 gcaaagcacg attgatggga tacctccttt aatttggact ggcttgccgt acttacaatt 1620 tgactgccag tctctttggg ccccgattaa ttctttccag tgctttagct ttagatattg 1680 cggtgcgatg tcatcaatga cgttatactc cacttcattt gagaacactc tagaattgaa 1740 gtctaggtgt ccactaaggt agttatgtgg gcctaacgca cgagcccaca tcgtcttccc 1800 tgtcctcgaa tcaccttcta ctatgagact tactggtcta attggccgcg cagcggaacc 1860 tctcccaaaa tattcatcgg cccactcttg catcgcgtct ggtacgttag tgaacgagga 1920 gagtggaaac ggagggaccc atggttccgg aggcttttgg aatattctgt tggcattagc 1980 tacgaggtta tgatgttgca agaagaaatg ttgcggttgt tcttctctga ttactatcag 2040 agctacctct gcagatgatg cattcaacgc cttggcatat gtgtcgttaa ctgtctgctg 2100 acctcctcta gcagatctgc cgtcgacttg aaactgcccc cattcaatgg tgtctccgtc 2160 tttgtcaatg taggacttga cgtcggagct ggatttagct ccctgtacgt tcggatggaa 2220 atgtattgac ctggttgagg acaccaggtc gaagaatctg ctattcgtgc attggtattt 2280 gccttcgaat tggatgagaa catgcagatg aggttgccca tcttcgtgta attctctgca 2340 gatcttgatg aatttcttat tcaccggagt atttagggtt tgtaattggg aaagtgcttc 2400 ctctttagaa agagagcatt gtggatatgt gaggaaataa tttttggact gaactctaaa 2460 tttattaggc ggtggcattt ttgtaataag aggtggtact ccaattgagc tctctcagtt 2520 actccaattg agccccctca aaacttgctg aacatattgg agtattagag tatcttatat 2580 actataactc tcttttacgg atttgtgaca cctggcggcc atccgctata atatt 2635 //