ID GU984638; SV 1; linear; genomic RNA; STD; VRL; 2475 BP. XX AC GU984638; XX DT 19-MAY-2010 (Rel. 104, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Grapevine virus B isolate GVB 953-1 hypothetical protein, putative movement DE protein, and capsid protein genes, complete cds; and RNA binding DE protein-like gene, complete sequence. XX KW . XX OS Grapevine virus B OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus. XX RN [1] RP 1-2475 RX DOI; 10.1007/s11262-010-0511-6. RX PUBMED; 20628801. RA Goszczynski D.E.; RT "Divergent molecular variants of Grapevine virus B (GVB) from corky bark RT (CB)-affected and CB-negative LN33 hybrid grapevines"; RL Virus Genes 41(2):273-281(2010). XX RN [2] RP 1-2475 RA Goszczynski D.E.; RT ; RL Submitted (03-MAR-2010) to the INSDC. RL Virology, Plant Protection Research Institute, Pretoria, South Africa XX DR MD5; 0e8d3d9e1e5be37d4924259ccb38ea26. XX FH Key Location/Qualifiers FH FT source 1..2475 FT /organism="Grapevine virus B" FT /host="Nicotiana benthamiana" FT /isolate="GVB 953-1" FT /mol_type="genomic RNA" FT /country="South Africa" FT /collected_by="D.E. Goszczynski" FT /note="variant of corky bark-affected LN33 hybrid FT grapevine" FT /db_xref="taxon:35289" FT CDS 27..566 FT /codon_start=1 FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="UniProtKB/TrEMBL:D6PW85" FT /protein_id="ADG57795.1" FT /translation="MSLSPQMSEPEGLAQLLRQVESLNLDISVLDRDYSKLGIIEAQHY FT RILSLLCRINKVSVSFIVSCLVRGECTRQTYQEGIKCLDLEEVIERLVNRSLPPVFSIR FT QNFERGVVSFNYPWYYSIGREPGSRTQYLFRNYVPGLKERISALPWVALGYKANASNNP FT ANPGTHTYTIECVPKT" FT CDS 436..1401 FT /codon_start=1 FT /product="putative movement protein" FT /note="ORF3" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:D6PW86" FT /protein_id="ADG57796.1" FT /translation="MSQVSRSESQRYPGWLSGTKQTHPTTQQIPEPTHTQLSVFPKPKE FT ELGVKGVKSAIAKTKVYDLSYFERLFPTRVFKSVVHEEIRVRDGEVKQVINLMDEDFVR FT KIETTSYPYLHLGCVAICVIPHGRDLKGEVEFTLRDTRFLPRSNPLMSFGCKAERMLSA FT FSAFPGYFVSTYDLIDGFTMELMVKAKGMEFEEGVRPMSIQIICVAKLCSQDFHHQYAL FT QKVKKGAYQALLNSYLVQCEDQTEYLEVQSAEGVPDRSGYTGIQVKSGQSESIDKLLVP FT PEVYETISKQFPESHGKYIPDGKDKEQHLRTPMRRSDLRN" FT CDS 1322..1915 FT /codon_start=1 FT /product="capsid protein" FT /note="ORF4" FT /db_xref="GOA:D6PW87" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:D6PW87" FT /protein_id="ADG57797.1" FT /translation="MENISRMAKIRSNISELLCAGVTFVTDARETGFDRPMYFRTLFGY FT IALTGASAKAQHYENVDIIGDKVGAEGIDSRGTINISEQVEKMMGYSRAVPSGVCKGLT FT LRQMCEPFAEGARDCLTILATLRVYSRLALKMAKLGQKEPQVMFDFNSGLNLLTLSATE FT ASAIQSLDSRLFRTEGAKNVFTAQASVGEQSVEI" FT misc_feature 1957..2331 FT /note="similar to RNA binding protein; ORF5" FT 3'UTR 2332..2475 XX SQ Sequence 2475 BP; 718 A; 485 C; 658 G; 614 T; 0 other; taaagtgagg aacgaaggag gattagatga gtctgagtcc acagatgagt gagccggagg 60 ggttagccca attgttgcgt caagtagaga gtcttaatct agatattagt gtactagata 120 gggattacag caaattaggc ataatagagg ctcaacacta taggatatta agtctccttt 180 gtagaatcaa taaagttagt gtgtcattca tagtgagctg tttggtaagg ggggagtgca 240 ctaggcaaac gtaccaagag ggcataaagt gcttagatct tgaagaggta attgagcggt 300 tagtcaaccg ttccttaccg cctgtcttct cgataaggca aaactttgaa agaggggtgg 360 tttcatttaa ctacccttgg tactactcca tcggtcgaga accagggtcc aggactcaat 420 atctgttccg taactatgtc ccaggtctca aggagcgaat ctcagcgtta ccctgggtgg 480 ctctcgggta caaagcaaac gcatccaaca acccagcaaa tcccggaacc cacacataca 540 caattgagtg tgttcccaaa acctaaagag gagctggggg tgaagggggt aaagagcgcc 600 atcgcaaaga caaaggtcta cgacctgagc tacttcgaaa gacttttccc gacaagagtg 660 ttcaaaagtg tggtgcacga ggagatccga gtaagggatg gagaggtcaa gcaggtaata 720 aatctcatgg atgaggactt tgtaaggaaa atagaaacaa cctcgtaccc ttatctgcat 780 ctgggttgcg tggccatttg tgtgatacct catggtagag atttgaaggg tgaggtggaa 840 tttactctca gagatacaag gttcttacca agaagcaacc cgttgatgtc attcgggtgc 900 aaagcggaga ggatgctaag cgctttcagt gctttccctg gttacttcgt cagcacttat 960 gatctcattg atgggttcac tatggaattg atggtcaaag ccaaagggat ggaatttgaa 1020 gaaggtgtgc gtcccatgtc catacaaata atctgcgtcg ccaaactgtg ctctcaagat 1080 tttcaccacc aatatgcttt acaaaaggtt aagaagggtg cctatcaagc gttgctcaat 1140 tcatacttgg tgcaatgcga ggatcagaca gagtacttgg aagtgcaaag tgcagaaggt 1200 gtgcccgatc gtagtggtta cactggcatc caagttaagt caggacaatc tgagtcaata 1260 gataagctgt tggtgccacc tgaggtgtac gagacaataa gcaagcaatt cccggagagt 1320 catggaaaat atatcccgga tggcaaagat aaggagcaac atctcagaac tcctatgcgc 1380 aggagtgacc ttcgtaactg atgcaagaga gaccggcttt gaccgcccca tgtacttcag 1440 gaccctcttt gggtacatcg cattaactgg ggcgtctgcc aaagctcaac actatgagaa 1500 tgtggatatt ataggtgata aagtaggagc agagggtata gatagtaggg gtaccatcaa 1560 tatctcagaa caggtggaga agatgatggg gtattcaaga gctgtgccgt ctggcgtgtg 1620 caaaggttta acccttcgtc aaatgtgtga gcccttcgct gaaggggcaa gagattgttt 1680 gaccatcctc gccactctaa gggtgtatag cagattggca ttgaaaatgg ctaagttggg 1740 tcagaaggaa cctcaagtga tgtttgactt caactctggt ctcaatctgt taaccctgtc 1800 cgccactgag gcttcggcca tacaatctct ggattccagg ctctttcgaa cagagggtgc 1860 taagaacgtc ttcacagcac aggccagcgt gggcgagcaa tctgttgaga tataggtggt 1920 taactcatag atataagggt attggtgtgc gtaagtatgt ctaagtattt aggtgagtct 1980 aggagtgcgg ctaaacgaag ggctactcgt tacggccgtt gttattgttg tggtagagta 2040 gagtgtaata agggactgag aactacacga tctcaagatg aggtgaagga gtgcataaga 2100 acaccggcga ctaggttttt aaccgaaaac ggtggacggt atgtaactaa cgccatcaac 2160 ctcgctttgg gagacatgga aagaattggg aagtctgagt accaatcgtt gttccggcag 2220 aatagagccc cttttggtat gcgtagccct gaagaaaccc cggagttcta caactgggga 2280 accgatttca acgctggtta aagcgtgttt gctgatagac catacaaata gtctatccct 2340 gatttcaata ctaggttaag tatgttcgct gacagaccgt actaatagtc tgtccttata 2400 gttcgagggt agaataaaat aatcccaccg caaacgactt aatgttagtg gtgaaagaag 2460 cgtgaataaa cacga 2475 //