ID GU972569; SV 1; linear; genomic RNA; STD; VRL; 2511 BP. XX AC GU972569; XX DT 28-JUN-2010 (Rel. 105, Created) DT 28-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate CACSC3 segment RNA1 polyprotein gene, DE partial cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2511 RX DOI; 10.1016/j.virusres.2010.05.017. RX PUBMED; 20540977. RA Oliver J.E., Vigne E., Fuchs M.; RT "Genetic structure and molecular variability of Grapevine fanleaf virus RT populations"; RL Virus Res. 152(1-2):30-40(2010). XX RN [2] RP 1-2511 RA Oliver J.E., Fuchs M.; RT ; RL Submitted (04-MAR-2010) to the INSDC. RL Plant Pathology and Plant-Microbe Biology, Cornell University, 630 West RL North Street, Geneva, NY 14456, USA XX DR MD5; ec929fbd994dc1891483c864c42ecc19. XX FH Key Location/Qualifiers FH FT source 1..2511 FT /organism="Grapevine fanleaf virus" FT /segment="RNA1" FT /host="Vitis vinifera cultivar Cabernet Sauvignon" FT /isolate="CACSC3" FT /mol_type="genomic RNA" FT /country="USA" FT /isolation_source="leaf" FT /collection_date="16-Oct-2007" FT /db_xref="taxon:12274" FT CDS <1..2483 FT /codon_start=3 FT /product="polyprotein" FT /db_xref="GOA:D9D981" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D9D981" FT /protein_id="ADJ10926.1" FT /translation="IRGEVPYVPEDGLVSRGYRKVGYLHASDAPHVPSKTSFMKVPDEL FT CFPYPDPKQPAILSAEDERLKGTIHEGYTPLRDGMKKFAEPMYLLEEKLLDEVAGDMVQ FT TWYDPGEFLEDISLDQAINGDMDEEYFDPLVMDTSEGYPDVLDRKPGEKGKARFFVGEP FT GNRAFVAGCNPEKAYYQLEEDSKTKIPSLVSIETPKDERLKRSKIDTPGTRLFSVLPLA FT YNLLLRVKFLSFSRLLMKKRGHLPCQVGINPYSREWTDLYHRLGELSDVGYNCDYRAFD FT GLITEQILSTIADMINAGYRDPVGNRQRKNLLLAICGRLSICGNQVYATEAGIPSGCAL FT TVVLNSIFNELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQYFTGDAL FT KMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGMLNAPLEKLSIMSSLV FT YIRSDGSDMLQKPLDNVNTALVELYLHGDRTYFESVRAFYFEKLPPGAYKELTTWFQAE FT SFHECQKSGESGYKPQGLIEISHGAAFASFTQQAGTELEKHDICPGLSIAGTKYIATEN FT EIVLSLSSVLPGDRNVFKLDLPCGDGIGRLPSKCSILNLRKPGLVMRLCKRAQDEKKTL FT VIRDERPYIGAWAVACICGESFGFGQQSVLALYANLLGPNQRNGLASYFSDFESPIHIK FT KVHAKTNSYEGGEALKEIFTFCETIFYEATEMDTRKVMLQNQPDVYPSISLVGGVCFPN FT EGGEPGAMYSETDVTMARQVQGVYVSEACVKCCRRCVGVATRVVTNTQLFGNNLLKTHL FT KALRKIQNHTCLRK" FT mat_peptide <1..8 FT /product="proteinase" FT mat_peptide 9..2480 FT /product="RNA-dependent RNA polymerase" FT 3'UTR 2484..>2511 XX SQ Sequence 2511 BP; 708 A; 461 C; 622 G; 720 T; 0 other; ttattagggg agaagtgcca tatgtaccag aagatgggtt agtgtcgagg ggatatagga 60 aagtgggtta tttgcacgca tcggatgcgc cacatgtgcc ttctaagact tccttcatga 120 aggtaccaga tgaattgtgc tttccatatc ctgatcctaa gcagcccgcc atccttagcg 180 cagaggatga acgccttaag ggaacgatcc atgaaggata cactccgtta agggatggca 240 tgaagaagtt tgctgagcca atgtatctgc tagaggaaaa actactcgat gaagttgcag 300 gtgacatggt tcagacgtgg tatgacccgg gtgaattcct tgaagatatt tctttagatc 360 aagctatcaa tggggacatg gatgaggaat atttcgaccc cctagtgatg gacacgtctg 420 aaggatatcc cgatgtttta gatcgtaaac ctggggaaaa gggaaaggcg agattctttg 480 ttggggaacc aggaaataga gcctttgtag ctggttgtaa tcctgaaaag gcttattacc 540 aactagaaga ggactctaaa accaagatac cttccttggt tagtatagaa accccaaaag 600 acgagagatt aaaaagaagt aaaatcgata ctcctggtac gagattattt tctgtgctgc 660 ccttggcata taatctcttg ttgagagtaa aatttttgtc tttttcccgc ctactgatga 720 agaagagagg ccacctgcct tgtcaagtgg gcatcaatcc ttatagtcgc gaatggaccg 780 atttgtatca ccgcttaggt gaactctctg atgtcggata caattgtgat tatagggctt 840 ttgatggcct aattacggag caaattttga gtacgatcgc cgatatgatc aatgctggat 900 atcgtgaccc tgtcggcaat aggcagagga aaaatttgct cctagcaata tgtggacgcc 960 tctctatctg tggaaatcaa gtgtatgcca ctgaagcagg cataccttca ggctgtgctc 1020 tcacagtagt actcaattcc atttttaatg aactactgat gagatattgc ttcaagaaaa 1080 tagttccccc tgtgtacaag gaatgttttg acagatgtgt cgtgctcatc acctatggtg 1140 atgataatgt cttcactgtg gcacaatctg tcatgcagta ttttactggc gatgctctga 1200 aaatgcaaat ggcaaagctt ggggtaacta ttactgatgg gaaagataag tctctttcca 1260 ctattccagc ccgtccactg ctggaattag aatttttgaa acgtggattt gttagaagct 1320 ctgggggtat gttaaatgcc cctttggaaa aattatcaat aatgagttct ttggtctaca 1380 tcagaagtga tggctcagac atgttgcaga aaccattgga caatgttaat actgcacttg 1440 tcgagcttta tctacatggt gatagaactt attttgaatc agtcagagct ttttacttcg 1500 agaaactccc tcccggcgct tataaggagt tgacaacgtg gtttcaagca gaatcatttc 1560 atgagtgtca gaagagtgga gagagtggtt ataagccaca agggctcatt gagattagtc 1620 atggagcagc ttttgccagt tttactcaac aagctggtac agagttggaa aagcatgaca 1680 tttgccctgg cttatcgatt gcaggaacta agtacattgc tactgagaat gagattgttt 1740 tgtctcttag ttccgtcctg cccggggata gaaatgtttt caagttggat ctgccttgtg 1800 gagacgggat agggcgtttg ccttccaaat gcagtatctt aaacttgaga aaaccgggct 1860 tggttatgag attgtgcaag cgtgcccaag atgaaaagaa gaccttagtt attcgtgacg 1920 aaaggccata cattggtgca tgggcagttg cttgcatatg tggagagagt tttggcttcg 1980 ggcaacagag cgttcttgcg ctttatgcca acttgttggg accaaatcag aggaatggct 2040 tagccagtta tttttctgat tttgaaagtc ccattcatat caagaaagtc catgccaaaa 2100 caaactctta tgaggggggt gaagctttaa aggaaatttt cactttttgt gagactattt 2160 tctatgaagc caccgaaatg gatactagga aagtgatgtt gcaaaatcaa ccagacgtct 2220 atcctagtat aagtcttgtt gggggggttt gtttcccaaa tgagggagga gagcctggag 2280 ccatgtactc ggaaacagat gttacgatgg ctagacaggt tcaaggagtc tatgtaagtg 2340 aagcgtgcgt gaaatgttgc aggcgttgtg taggagtagc aaccagggtt gtgactaata 2400 cgcaactttt tggcaacaat cttttaaaga ctcatcttaa ggctttgagg aaaattcaga 2460 atcatacatg ccttaggaaa taagccttcc aattcttggt actgggataa c 2511 //