ID GU972562; SV 1; linear; genomic RNA; STD; VRL; 2511 BP. XX AC GU972562; XX DT 28-JUN-2010 (Rel. 105, Created) DT 28-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate CAZINA5 segment RNA1 polyprotein gene, DE partial cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2511 RX DOI; 10.1016/j.virusres.2010.05.017. RX PUBMED; 20540977. RA Oliver J.E., Vigne E., Fuchs M.; RT "Genetic structure and molecular variability of Grapevine fanleaf virus RT populations"; RL Virus Res. 152(1-2):30-40(2010). XX RN [2] RP 1-2511 RA Oliver J.E., Fuchs M.; RT ; RL Submitted (04-MAR-2010) to the INSDC. RL Plant Pathology and Plant-Microbe Biology, Cornell University, 630 West RL North Street, Geneva, NY 14456, USA XX DR MD5; 7c3ad81edc65417fe923d68f0d64da2d. XX FH Key Location/Qualifiers FH FT source 1..2511 FT /organism="Grapevine fanleaf virus" FT /segment="RNA1" FT /host="Vitis vinifera cultivar Zinfandel" FT /isolate="CAZINA5" FT /mol_type="genomic RNA" FT /country="USA" FT /isolation_source="leaf" FT /collection_date="16-Oct-2007" FT /db_xref="taxon:12274" FT CDS <1..2483 FT /codon_start=3 FT /product="polyprotein" FT /db_xref="GOA:D9D974" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D9D974" FT /protein_id="ADJ10919.1" FT /translation="IRGEVPYVPEDGLVSRGYRKVGYLHASDAPHVPSKTSFMKVPDEL FT CFPYPDPKQPAILSAEDERLKGTIHEGYTPLRDGMKKFAEPMHLLEEKLLDEVAGDMVQ FT TWYDPGEFLEDISLDQAINGDMDEEYFDPLVMDTSEGYPDVLDRKPGEKGKARFFVGEP FT GNRAFVAGCNPEKAYYQLEEDSKTKIPSLVSIETPKDERLKRSKIDTPGTRLFSVLPLA FT YNLLLRVKFLSFSRLLMKKRGHLPCQVGINPYSREWTDLYHRLGELSDVGYNCDYKAFD FT GLITEQILSTIADMINAGYRDPVGNRQRKNLLLAICGRLSICGNQVYATEAGIPSGCAL FT TVVLNSIFNELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQYFTGDAL FT KMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGMLNAPLEKLSIMSSLV FT YIRSDGSDMLQKLLDNVNTALVELYLHGDRAYFESVRTFYMEKLPPGAYKELTTWFQAE FT SFHECQKSGESGYKPQGLIEVSHGVAFASFTQQAGTELEKHDICPGLSIAGTKYIATEN FT ELVLSLSSILPGDRNVFKLDLPCGDGIGRLPSKCSVQNLRKPGLVMTVCKLAQLERKTL FT VIRDERPYIGAWAVACICGESFGFGLQSVLALYANLLGPDRRNGLASYFTDFESPVHIK FT RVHAKTNAREGGEALKEIFPFCEITFYDATDMDTRRVMIQNQPDAYPSISLVGGICFPN FT EGGEPGAIYSETDVKMAGQVRGVYVSEACLKCCRRCAGVATRVVTNTQLFGNNLLKTHL FT KALRKIQNHTCLRK" FT mat_peptide <1..8 FT /product="proteinase" FT mat_peptide 9..2480 FT /product="RNA-dependent RNA polymerase" FT 3'UTR 2484..>2511 XX SQ Sequence 2511 BP; 696 A; 476 C; 628 G; 711 T; 0 other; ttattagggg agaagtgcca tatgtaccag aagatgggtt agtgtcgagg ggatatagga 60 aagtgggtta tttgcacgca tcggatgcgc cacatgtgcc ttctaagact tccttcatga 120 aggtaccaga tgaattgtgc tttccatatc ctgatcctaa gcagcccgcc atccttagcg 180 cagaggatga acgccttaag ggaacgatcc atgaaggata cactccgtta agggatggca 240 tgaagaagtt tgctgagcca atgcatctgc tagaggaaaa actactcgat gaagttgcag 300 gtgacatggt tcagacgtgg tatgacccgg gtgaattcct tgaagatatt tctttagatc 360 aagctatcaa tggggacatg gatgaggaat attttgaccc cctagtgatg gacacgtctg 420 aaggatatcc cgatgtttta gatcgtaaac ctggggaaaa gggaaaggcg agattcttcg 480 ttggggaacc aggaaataga gcctttgtag ctggttgtaa tcctgaaaag gcttattacc 540 aactagaaga ggactctaaa accaagatac cttccttggt tagtatagaa accccaaaag 600 acgagagatt aaaaagaagt aaaatcgata ctcctggtac gagattattt tctgtgctgc 660 ccttggcata taatctcttg ttgagagtaa aatttttgtc tttttcccgc ctactgatga 720 agaagagagg ccacctgcct tgtcaagtgg gcatcaatcc ttatagtcgc gaatggaccg 780 atttgtatca ccgcttaggt gaactctctg atgtcggata caattgtgat tataaggctt 840 ttgatggcct aattacggag caaattttga gtacgatcgc cgatatgatc aatgctggat 900 atcgtgaccc tgtcggcaat aggcagagga aaaatttgct cctagcaata tgtggacgcc 960 tctctatctg tggaaatcaa gtgtatgcca ctgaagcagg cataccttca ggctgtgctc 1020 tcacagtagt actcaattcc atttttaatg aactactgat gagatattgc ttcaagaaaa 1080 tagttccccc tgtgtacaag gaatgttttg acagatgtgt cgtgctcatc acctatggtg 1140 atgataatgt cttcactgtg gcacaatctg tcatgcagta ttttactggc gatgctctga 1200 aaatgcaaat ggcaaagctt ggggtaacta ttactgatgg gaaagataag tctctttcca 1260 ctattccagc ccgtccactg ctggaattag aatttttgaa acgtggattt gttagaagct 1320 ctgggggtat gttaaatgcc cctttggaaa aattatcaat aatgagttct ttggtctaca 1380 tcagaagtga tggctcagac atgttgcaga aactattaga caatgttaat actgcacttg 1440 tcgagctgta cctacatgga gatagggctt attttgaatc agtcagaact ttttatatgg 1500 aaaaactccc tcctggcgct tataaggaac tgacaacgtg gtttcaagcc gaatcatttc 1560 atgagtgcca gaagagtgga gagagtggct ataagccaca agggctcata gaggttagtc 1620 atggagtggc ttttgccagt tttacccaac aagctggtac ggagctggaa aagcatgaca 1680 tttgtcctgg cttatcaatt gcaggaacta agtatattgc caccgagaat gagcttgtct 1740 tgtcacttag ttccatcttg cctggagata gaaatgtttt caagctggat ttgccttgtg 1800 gagatggaat agggcgttta ccctccaaat gcagtgtcca gaatttaaga aaaccaggct 1860 tggtcatgac tgtgtgtaag cttgctcaat tagaaaggaa gaccctagtc attcgtgatg 1920 aaaggcctta cattggtgcg tgggcagtcg cttgcatatg tggagagagt tttggtttcg 1980 ggctacagag tgttctcgcg ctctatgcta atttgctggg acctgatcgg agaaatggct 2040 tggctagcta tttcactgat tttgagagtc ctgttcatat caaaagagtc catgccaaaa 2100 caaacgctcg tgaaggtggt gaagctttga aggaaatctt tcctttctgt gagattactt 2160 tttatgacgc caccgacatg gatactagga gggtgatgat tcaaaatcaa ccagacgcct 2220 atcccagtat cagccttgtt ggggggattt gtttcccaaa tgagggaggg gagcctggag 2280 ctatatattc ggagacggat gttaagatgg ctggacaggt acgaggagtc tacgtgagcg 2340 aagcatgttt gaaatgttgt cgacgctgtg cgggagttgc aaccagggtc gtgactaata 2400 cacagctttt tggcaacaat cttttgaaga ctcatcttaa ggctctgagg aagattcaaa 2460 atcatacatg ccttaggaag taatcctccc aattcttggt actgggataa c 2511 //