ID GU937006; SV 1; linear; genomic RNA; STD; VRL; 3224 BP. XX AC GU937006; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Rice gall dwarf virus isolate Guangdong segment S3, complete sequence. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3224 RA Zhao Q., Li H.; RT ; RL Submitted (25-FEB-2010) to the INSDC. RL Department of Plant Virology, Resource and Environment, South China RL Agricultural University, Wushan Road of Tianhe District, Guangzhou, RL Guangdong (86)510642, China XX DR MD5; ee3c36d4d138c15918d893c245db3aed. XX FH Key Location/Qualifiers FH FT source 1..3224 FT /organism="Rice gall dwarf virus" FT /segment="S3" FT /host="Oryza sativa Indica Group cv. Boyou 27" FT /isolate="Guangdong" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2007" FT /db_xref="taxon:10986" FT CDS 36..3101 FT /codon_start=1 FT /product="major core capsid protein" FT /note="P3" FT /db_xref="GOA:D6PAI0" FT /db_xref="InterPro:IPR015312" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/TrEMBL:D6PAI0" FT /protein_id="ADF59188.1" FT /translation="MDVTGAPYSSGLNVRNVLLTESTSTFTPIETYNVQDDIRTIRISA FT KIAEESVVSRVPLPVSFKPISGITKLFDIIPISRGSTTSIVEHPQTSFMIKLRDNTFSD FT YACLDHLVAFEPALILHRLKMLFSILGKYASSIISEVPTLDVMIDNAQVTVIDMSKFDD FT RNMNTYAERLPRDIEVYAAKQDILKQYVRTSVNETPITFRDDLPIPVRERPTLYRRYIV FT PFTPVELSLYNMALQMLDLQYCHPLIVYKYLQDRAPPFLVVNDQIGLEMLSAGDGELLP FT RPVMEVLDYSLVYSSPLALNNLGSLLMSRIKTSIKVRSINEVSSSLSEIVNASSTVSNS FT ASSAIANMNVAGVETIAAFIIRSVLNPNISYAIIGKLDLDAFNDFIYGTCLLLLQAITP FT PSAIAAMSRVRINNALAYFLLRYICPQPVYTRLLQNEIIPSLTNTLEWSSVDRDILAAI FT YSNLFVADGRIWNLVSRYYREVPPEEVTQVSAPARDTSYGINETRGISLPYLFGDAITE FT MRPDNRLNDYKQRLNLPPRSPILIANPMRNNVVDLNNVNVKMDFIMDLYDQNNFVKSPA FT QWVRNSASNSALLAKFRDSVSNITGILENVLSNAYSNAVNTYCDSVYRAGVPLNWKYRV FT VIDPKDMMFVIFGVCPRYVLMGDSIPDFFAGSEDILILQLVRAIWEVMSNHMGNVPTRF FT FRMEDVQKDLSEMVSIILSKKIDVTRYFTDDMRSTTFSKEAWERFIARQVGEELPPLYR FT TILDQVETINNYMDQMMAIMPIVDHFYVVRNSGIAARGSVNPILAATTLNLNQINTTMI FT IRDWSELVRLVMTQERVDLNTSHSLFEAEFYKLSEIASNEFVRSNERGESEPHFTDVEA FT IRVNMYARYELKIYKEQGEFSKPTKLNKIMHEDLTSFVKSNIGKPYPPVFTIPIDIMLN FT DLGECTSTKTRMRSFKVDEYFKCFTGAQVIIPLDYVNLEHVGSIQDLQVMFNGSVSVRI FT KPWIIKENFDVNYVQTGNHEVLIDPLPNVLPI" XX SQ Sequence 3224 BP; 1030 A; 581 C; 682 G; 926 T; 5 other; ggcatttttc cacttggcca tttgttccgt agcaaatgga tgtgactggt gcgccatatt 60 caagtggttt gaatgttaga aatgtgctat tgaccgaaag cacctctacc ttcactccaa 120 ttgaaacata taatgttcaa gatgatattc gaacgattag aatatcagct aaaatcgcag 180 aagaatctgt ggtcagcaga gtaccacttc ccgttagctt taagccaatt agtggaataa 240 ctaagttatt tgacataatt ccaatatcta gaggatcgac cactagtata gtagaacatc 300 cacagacatc atttatgatt aaattacgtg ataacacttt tagtgattat gcttgtttgg 360 atcacttggt ggcattcgaa ccagcattaa ttctccatag attgaaaatg ttgttttcaa 420 tattaggtaa atatgcttca tcaattatat cagaggttcc aactctcgac gttatgattg 480 ataacgcaca agttacagtt atagatatgt ctaaattcga tgatagaaac atgaatacct 540 atgcagagag gttacctcga gatatagagg tgtatgccgc taagcaagat attttaaaac 600 aatacgttag aacatcagtt aatgaaacgc caattacatt tagagatgat ctgccaatac 660 ctgtaagaga aagaccaacg ttgtatcggc ggtatattgt tccatttact ccagtggaat 720 tatccctata caatatggca cttcagatgt tggatttgca atactgtcat cctttgattg 780 tatacaaata ccttcaagac agagctcctc cctttttagt cgtcaacgac caaattgggt 840 tagagatgct cagcgctggg gatggagagt tgcttccgcg tcccgtaatg gaagtacttg 900 actattcact agtttattca tcaccgttgg ctctaaacaa cctcgggtcc ttgttgatgt 960 ctaggattaa gacgtcaatt aaggttagat ctatcaacga ggtttcatca tccttatcag 1020 agatagtaaa tgcatcatcg actgtttcca actcggcgtc tagcgccatc gctaatatga 1080 atgttgctgg agttgagaca atagcagcgt ttataataag atcagtgctt aatcctaaca 1140 tatcttatgc aatcataggg aaattggatt tagatgcatt caatgatttc atttatggca 1200 cttgtctgct attattacag gcgattacac caccaagtgc aattgcagca atgtcaaggg 1260 tacggataaa taacgcatta gcttattttt tgctaagata catctgtccg cagccagttt 1320 acaccaggct actgcaaaat gaaataatac catcactgac aaacacgctc gaatggagta 1380 gcgttgaccg agatatcctg gcggctatat attcgaattt gtttgttgcg gatggtagga 1440 tatggaacct agtaagtagg tactataggg aagttccacc tgaagaggtg actcaggtat 1500 cagctcctgc gagagatacc tcttatggca ttaatgaaac aagaggaata agtcttccat 1560 acttrtttgg rgacgcratt acggaaatgc ggccggataa cagacttaat gattataaac 1620 aaagattaaa cttaccacca aggagtccga ttctaatagc gaatcctatg aggaataatg 1680 ttgtagattt gaataacgtg aacgtcaaaa tggattttat aatggatctt tatgaccaaa 1740 ataatttcgt gaagtcacca gctcaatggg tgaggaatag cgccagtaat tcagcgctac 1800 tagcgaaatt tagagacagt gttagtaata taacaggaat actcgaaaac gtactgtcta 1860 acgcgtattc yaacgccgta aacacrtact gcgattcggt atatagagca ggagtgccgt 1920 taaactggaa gtatagagta gtgattgacc ccaaagacat gatgttcgtt atatttggag 1980 tgtgtccacg ctacgttctt atgggagatt caatacccga cttctttgcc ggaagtgagg 2040 acattttaat tctgcagttg gttagagcta tttgggaagt tatgtctaac cacatgggaa 2100 acgtaccaac aagattcttt aggatggaag atgttcaaaa agacttgagt gaaatggtgt 2160 caattattct gtcaaagaag atagacgtta ctaggtactt tacagatgat atgaggtcaa 2220 cgacgttttc taaggaagcg tgggaacgtt tcatcgcaag acaggttggt gaggagctac 2280 cacctctata cagaacaatt ttggatcagg tagaaaccat taataactat atggaccaaa 2340 tgatggctat tatgcccatc gttgatcatt tttatgttgt ccgaaacagt ggtatagctg 2400 ctcgcggatc tgttaaccct attttagcgg ctactacgct aaacctgaac caaataaata 2460 caacaatgat catacgggac tggtcagagt tggtaaggtt ggtgatgaca caagaacgag 2520 tagatttaaa tacatcacac agcttatttg aggctgagtt ctacaaacta agcgagatag 2580 catcaaatga gttcgtgaga tctaacgaac gtggagaatc tgagccacat tttactgatg 2640 tggaagcgat aagagtcaac atgtatgcaa ggtatgaatt aaaaatatat aaggaacaag 2700 gagagttttc aaaaccgact aaattaaaca aaataatgca tgaagattta acttcatttg 2760 taaaatccaa cataggtaaa ccgtatccgc ctgtgtttac cataccaatt gatatcatgc 2820 tgaacgattt gggtgaatgc acctcgacaa aaacgagaat gcgatcgttt aaagtagacg 2880 aatactttaa atgctttact ggagcacaag tcataatacc tttggattat gtaaatctgg 2940 agcacgtggg atcaatccaa gacttacagg taatgttcaa tggaagtgtt tccgtgcgaa 3000 ttaagccatg gataattaag gaaaatttcg atgtaaatta cgttcagacg ggtaatcacg 3060 aggtgctaat tgacccgtta ccaaacgtac tacccatata aaacactaac acatctgctt 3120 gagtgtggtt gctaagaaca tccaatgcgt gccttgtccg gggaggggca atcgtgacct 3180 attatttgcg aataataggg ttggccaatg ctggaaaagt tgat 3224 //