ID GU937004; SV 1; linear; genomic RNA; STD; VRL; 4505 BP. XX AC GU937004; XX DT 03-MAY-2010 (Rel. 104, Created) DT 03-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Rice gall dwarf virus isolate Guangdong segment S1, complete sequence. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-4505 RA Zhao Q., Li H.; RT ; RL Submitted (24-FEB-2010) to the INSDC. RL Department of Plant Virology, Resource and Environment, South China RL Agricultural University, Wushan Road of Tianhe District, Guangzhou, RL Guangdong (86)510642, China XX DR MD5; 6543493bd4464130f9c9ec9d1ce4237e. XX FH Key Location/Qualifiers FH FT source 1..4505 FT /organism="Rice gall dwarf virus" FT /segment="S1" FT /host="Oryza sativa Indica Group cv. Boyou 27" FT /isolate="Guangdong" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Oct-2007" FT /db_xref="taxon:10986" FT CDS 42..4418 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="P1" FT /db_xref="GOA:D6PAH8" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/TrEMBL:D6PAH8" FT /protein_id="ADF59186.1" FT /translation="MSGADVESYIFPRIREILTGGISGIREAYINELRVCEKLIQWRNG FT SDNQVDSTNDASVKGMVFHRVSERNELQNRYAGLYDDLFKLNNNNVDIDVITKHDETID FT KIISKELKSKMWYELNDEDIHSSLLPEFRFQTLDDYYDNMKKYLSQDDRDEKDNDNREE FT EDAKHRNDSVTRIQWQTLMEKDRKVKLHDDLSFSNEVETSLSTYINLRTKEEMDPRYVY FT HPVPALFITLTLLKVLTGGKAFSYGVRYLEKLCKTISKGERSLATYPAIFGSNGELVAT FT RLYSHYAIKMRLILNNMTYLLTYKSCHEFKGSYIDVNDEVLLYMLENPNGGRDLKKAVT FT RLNLYYGLRYNPKTTDSLKIIDGVDYHHEHPKYSDRSYDAPIIEPENHFSASEQCYEHN FT AKLLNKAVYSKTVKEYIDSDIKKVKDLNLPLLTKFTEKLVDMRCNKSIIYDIVFMRTLL FT NMGGYSRSNQITDFKGTIDDITKMNDEYLSDVSEKGKRAKMSEWMYPKMEACGYGLTKS FT ILNGQMVGVSYPSASESKAHIESYITPNSAGIGNLRLDVDVGGKMYKVRTTSKSAFVNA FT LGTNIFNIDTISMEPMFLSEYLTHLNQDEKMLLYDRRKNRQIQDIELMRLCGQNVIGSR FT STTAWRPVRPIYINVIQAHLAQAFIIGPHINATVGRQRTPPKGLWFTGEDVGIGFATIY FT QNGTSDVISHAIEASASGRCLSVLADCSSWDQTFLTESIIPYYQGIKRAISEFGQADSE FT NYYMYDNQRKDVVGMRLTESIDWFNEYQKKRIFNASYLGERYSFKVQYMWSGRLDTFFM FT NSVQNALVTERIANQVSSSVAGSPSLVWFQVAGDDAIMVYNANSITSSDQVDAIRKTVV FT DEYTADNHIINPQKTVISHISGEYAKIYYYAGMHFRDPSIQLHESEKISKATNITEVMR FT GYAQVAFEYNKRAIGSLRINSLYARLLASLAYSINVKRSDDQSIENKSSRRGSKAKVRS FT TKTNKLRSFSSVKYYPPLTSVITPTGVKGGLGMSLSGISLNEILMIKELLLDLVEAGLK FT IVDQVSFEQNEIVSKSLMRHFLRDRKDLIKEMGLDKGTKPVMAVRYRSSGSAFSSGNFE FT NGISMRLESLDSHKLSIARQSEAKLKSVGVNLPKMYTYENLPYSTINQSLKGITIDKDL FT SRMTNSDLVDQLRSIPESECKGNLISKYPVYGLFNARRVISMDEKVDNPIRYISTPDEG FT KALERLIGSRTGIQFKNQGYGGSPAIVRFIRRNGLTITEENLIDLVISSGAISLANPKQ FT NMIELFQAISGDQQSSLELANFFMNEKPHWEDKAISITINGSILENCDSRISNISRFVS FT IDAIRIPGDIKKMFTYIAYVYMCQMFILDDNTSSKIHISINEEQLRDFLISAKPISKNR FT MRQTIDMKFSNQNSGVTIEIDEESLSRTADLDYEVLKLVHPLSVPFLRNLSEGSPM" XX SQ Sequence 4505 BP; 1544 A; 752 C; 958 G; 1251 T; 0 other; ggcatttttt gagccaagcc accgaagcat atgtgtctgc catgagtggc gcagatgtcg 60 agtcatacat atttccgcgt atccgggaga ttctgactgg tggaatttct ggaatccgag 120 aagcatacat taatgagttg agagtctgtg aaaaactcat tcaatggaga aatggatcag 180 acaatcaagt tgacagtaca aatgatgcat ctgtgaaagg tatggtattt cacagagtat 240 ctgaaaggaa tgaattacag aatagatacg ccggattata cgacgatctt ttcaaattga 300 ataacaataa tgttgatatc gacgtgatca ctaaacatga tgagacgatt gataaaataa 360 tctcaaaaga gttgaaatct aaaatgtggt atgagttgaa tgatgaagac attcattcat 420 cgttgttgcc cgaattcaga tttcagactt tagatgatta ttatgataat atgaaaaagt 480 atctttctca agatgatcgt gatgagaaag ataatgacaa cagagaagaa gaagacgcta 540 aacatagaaa tgatagcgtg acgcgaatac aatggcaaac gcttatggag aaagacagaa 600 aagtcaaact ccatgatgat ttatcattct caaatgaagt agagactagt ctatctactt 660 atatcaactt acgaactaag gaggagatgg atccaaggta tgtataccat ccagttcctg 720 ctttatttat aactcttaca ttactaaaag tacttacggg agggaaagca ttttcgtatg 780 gcgtacgcta tcttgagaag ctttgtaaaa caatatctaa aggggaacgc agtttagcta 840 cataccctgc gatcttcggg tctaacggtg aattagtagc gactagatta tactctcact 900 acgccataaa gatgaggctt atcctgaaca acatgacata tttattgact tataaatcat 960 gtcatgagtt taagggttct tacattgatg taaacgatga agtcttgtta tacatgcttg 1020 aaaaccctaa tggtggaagg gatttgaaga aagcagtaac tagacttaat ctatactacg 1080 ggttacggta taatccaaaa actactgatt cattgaaaat cattgatgga gttgattacc 1140 atcacgagca tccgaaatat tcggatagga gttatgacgc cccaattatt gaacctgaaa 1200 atcatttctc tgcctccgag cagtgttatg agcataacgc taagttatta aacaaagccg 1260 tgtattcaaa aaccgtcaaa gaatatatcg acagtgacat taagaaagtt aaagacctaa 1320 acttgccatt attaactaag tttacagaaa aattggtaga tatgcgttgt aacaagtcaa 1380 taatttacga cattgtattc atgcgaactc tacttaatat gggaggctac tcaaggtcaa 1440 atcaaattac tgactttaag ggtaccatag atgacattac aaaaatgaat gatgaatacc 1500 tttccgacgt tagtgaaaag ggaaagagag ctaagatgtc tgaatggatg tatccaaaga 1560 tggaagcatg tggatatgga ttaaccaagt ccatcttgaa tggtcaaatg gtaggagttt 1620 catatccttc agctagtgaa tccaaggcgc acatagaatc gtatattaca ccaaactcag 1680 ctgggatagg taatctacga ttggatgtgg acgtcggtgg gaaaatgtat aaagttagaa 1740 ccacgtcaaa atctgcattt gtcaatgctt tgggaacaaa cattttcaat atagacacta 1800 tcagtatgga gccgatgttc ctatctgagt atttgactca tttaaaccaa gatgagaaaa 1860 tgctgttata tgatagacgt aagaatagac aaatacaaga cattgagttg atgaggctat 1920 gtggacaaaa tgttatcggt tcacgttcga ctactgcttg gaggcccgtt aggccaatat 1980 acattaatgt cattcaggcc cacttagctc aagctttcat aattggtcct cacataaatg 2040 caacggtcgg tcgccaacgt acaccaccta aaggtctgtg gtttactggc gaggacgttg 2100 gaattggatt tgctaccata taccaaaatg gaacttcaga cgtaatttca catgctatag 2160 aggcgtcagc atctggtaga tgtctctcgg tgctagccga ttgctcgtcg tgggatcaga 2220 catttttaac ggagtcaata ataccatact accaaggcat aaaacgtgca atcagtgagt 2280 ttggtcaagc tgatagcgaa aattattata tgtatgataa tcaaagaaaa gatgtggtag 2340 gtatgcgttt aaccgagtcg attgattggt tcaatgaata ccagaaaaaa cggatcttta 2400 acgcatctta tctgggagaa agatattcat ttaaggtaca atatatgtgg tcggggagac 2460 tagatacttt cttcatgaac tcagtacaga acgcattagt tactgaaagg atagctaatc 2520 aagtaagttc aagcgtagcc ggatccccta gcctagtttg gtttcaagta gctggagacg 2580 acgctataat ggtatataat gctaactcta taacatcatc ggatcaagtt gatgcaatca 2640 ggaaaaccgt agttgatgaa tatacggctg acaatcacat tatcaatcca caaaagaccg 2700 ttatctccca catttcagga gaatatgcta aaatatatta ctatgcaggt atgcatttca 2760 gggatccatc aatccagctg cacgagtcag aaaagatatc aaaagccact aacataaccg 2820 aggtcatgag aggttacgct caagtagctt ttgaatataa taagagggcc attgggagct 2880 tacgtataaa ttcactgtat gcacgtttat tagcatcatt agcatattca ataaatgtca 2940 aacgtagtga tgatcaatca attgagaata aatcaagtag gaggggttct aaagctaagg 3000 taagaagcac caagaccaac aaactccgat cattttcgtc cgtgaaatat tatccacctc 3060 taacatcagt gattactcca accggtgtta agggaggttt gggaatgagc ttaagtggaa 3120 tatctttaaa tgagatattg atgatcaagg aactattatt ggatctagtc gaggctgggc 3180 taaagatagt agatcaggta tcgtttgagc aaaatgagat cgtgtcgaaa tctttgatgc 3240 gacattttct tcgtgacaga aaggatttaa ttaaggaaat gggattggat aagggaacta 3300 aacccgtgat ggcagtgcgg tatagatcct caggttcagc tttctcctca ggaaattttg 3360 aaaatggaat ctcaatgaga ttagagagct tagattcaca caaactgagt atagctaggc 3420 agtcagaagc aaagctgaaa tcagttggcg taaacttgcc aaaaatgtat acatatgaga 3480 atctgccata ctccaccata aatcaatccc ttaaagggat aactatagac aaagatctga 3540 gtcgcatgac aaattctgat ctagttgatc aattacgaag tataccggaa tctgaatgca 3600 agggtaattt gatttcaaaa tatccagtct atggattgtt taacgcaagg cgggtcattt 3660 ccatggatga gaaggtggat aatccaatta gatacatatc gactccggat gagggaaagg 3720 cgttagagcg acttatagga tcaagaacag gaatacaatt caagaatcaa ggatatggag 3780 gatctccagc tattgttaga ttcataagga ggaatggatt aacaataact gaagagaatc 3840 tgattgactt agtaatttca tcaggagcaa tatccttagc gaatccgaaa cagaatatga 3900 ttgagttatt tcaagctata tcaggtgacc agcagtcatc actcgaactt gcgaatttct 3960 tcatgaatga aaaaccgcat tgggaagata aagccatatc gattactatc aatgggtcaa 4020 tattggaaaa ctgcgactcc agaatttcta atatatctag attcgttagt atagatgcaa 4080 ttagaattcc gggtgatatt aaaaagatgt tcacatatat tgcatatgta tacatgtgtc 4140 aaatgttcat tttggatgat aatacttcaa gcaagataca tatatcaatc aatgaagaac 4200 agttgcgtga cttcctaatc tcagcgaagc cgatatcaaa gaataggatg aggcagacga 4260 ttgatatgaa atttagtaat cagaacagtg gtgttacaat agaaatcgat gaagagtctt 4320 tatccagaac agctgatcta gattacgaag tattgaaatt agtgcatcca ctctcggtgc 4380 cattcttgag aaatttatcg gaagggtctc ctatgtgagg agcgacgtta tgtattgacg 4440 aaccattctg taggaaggct aggtaactcg gttgggagtt accgaaactg gctcaaaata 4500 ttgat 4505 //