ID GU906791; SV 1; linear; genomic RNA; STD; VRL; 5242 BP. XX AC GU906791; XX DT 21-JUN-2010 (Rel. 105, Created) DT 21-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE White ash mosaic virus replicase gene, partial cds; and 26 kDa helicase, 11 DE kDa protein, 8 kDa protein, 35 kDa protein, and coat protein genes, DE complete cds. XX KW . XX OS White ash mosaic virus OC Viruses; Riboviria; Tymovirales; unclassified Flexiviridae. XX RN [1] RP 1-5242 RA Lockhart B.E., Mason S.L., Machado J.E.; RT "Identification and characterization of a previously undescribed flexivirus RT causing a mosaic disease of ash (Fraxinus spp.) in the U.S.A."; RL Unpublished. XX RN [2] RP 1-5242 RA Lockhart B.E., Mason S.L., Machado J.E.; RT ; RL Submitted (22-FEB-2010) to the INSDC. RL Plant Pathology, University of Minnesota, 1991 Upper Buford Circle, St. RL Paul, MN 55108, USA XX DR MD5; 3d484eea4d31cbfaff94645a17d65085. XX FH Key Location/Qualifiers FH FT source 1..5242 FT /organism="White ash mosaic virus" FT /host="Fraxinus americana (white ash)" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:375547" FT CDS <1..2077 FT /codon_start=2 FT /product="replicase" FT /db_xref="GOA:D7PQU7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D7PQU7" FT /protein_id="ADI70508.1" FT /translation="STDTVIFDDYGKMPPGFIDAYLSIKPNVANAILTGDQRQSTYHLQ FT KSDAMTAEASDNVSAFTKYSDYYINATHRQPRRFANALGVHAERDFGGHVKETSLIPQG FT EPVLVPSHKEMMTLADLGHKVYTYSGCQGLTVPRATFVIDRDTPACSDNVLYTALSRAS FT ETVTFVNTYSDDAGFQSKLDALPYIKTFLSGVKECGNPPDHPPTEEEPPEAHAKTHLPV FT ENPNLLLDELIEHCEDKDTREIFVDGEKTNLAQTQDLTIQLFPHQQAKDEALFKETIKE FT RIRFANPEENNKELAATVRIGDLLFEAYADYMNVPTEASPFLEQEWLDARQEAEKKYLE FT KTLAQLTNGAPRQDPDFPDNFIALFNKSQWVKKLDKVGAKFKAGQTISSFKQEVVLLFI FT TMALYLRKQRVKHQPDYVFIMCEKNPSAFNEFIQGWDFSTPSYTSDYKQYDQSQDAVFL FT NFELRKAKHFGVPKFIRDCYKFLKCNARTFAGKLAIMRLTGEGPTFDANTECNIAYDAL FT RFKLTKGKKACYAGDDLAREECAEERSSWAYLNPSFKLTAKPIETTRPDFCGWRITKEG FT IVKQPRQLYQSLVLGFLRGNIASMIPSYKIDFTYAYKMGDKLFEIFDEDDLSCHQATVR FT LLHKKGVKLDISTDDEHVSNEEPPSDRLLSFEVEESKPIRLHTSPLEAWLSKQSHL" FT CDS 2128..2829 FT /codon_start=1 FT /product="26 kDa helicase" FT /db_xref="GOA:D7PQU8" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:D7PQU8" FT /protein_id="ADI70509.1" FT /translation="MFLPCLNMSISAVIDIVNKSHFVPCYPCTQLPLVINGVPGSGKST FT LLKELLNLHNVRIYTAGIPYGRSLKTEGVLPLSEFTSRANHLCILDEYQLATDKELEPF FT QVLVGDPFQGATHRRPHFIATTSFRVPKAVCEHLRSRDFQIESDKEGDLIKGSPFTTAV FT EGALLHLGQVSKDLAHSHNACSKDPTEVQGLEFDTVTLLYHSSELSNRIGFYVACTRAC FT KRLLLLSDEHV" FT CDS 2826..3140 FT /codon_start=1 FT /product="11 kDa protein" FT /db_xref="GOA:D7PQU9" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:D7PQU9" FT /protein_id="ADI70510.1" FT /translation="MSFSAPTNFSKPLLAIAIGVGAGLLIHTLRRSELPHAGDNIHHLP FT HGGLYKDGNKCMHINGPHKPSLKAGSTGPIYAVLILTLLIILSERFTRTRRSCTHTVLA FT " FT CDS 3052..3276 FT /codon_start=1 FT /product="8 kDa protein" FT /db_xref="GOA:D7PQV0" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:D7PQV0" FT /protein_id="ADI70511.1" FT /translation="MLCSSSLYSSFSLSVLLGLGAVALTLFLLEPGKPSCRITITGHTT FT VIENCADLAHIPEIIKSFSWTHSDDLCHP" FT CDS 3257..4201 FT /codon_start=1 FT /product="35 kDa protein" FT /db_xref="InterPro:IPR008398" FT /db_xref="UniProtKB/TrEMBL:D7PQV1" FT /protein_id="ADI70512.1" FT /translation="MTYVTLDIWITFRDTVYRHFRGLLESLRAIEGFKGVWNGALQGVM FT ALQDDMVEVKSILNAPSRPTISDVERSATLVQRNFLGLSEELIASAQHLLTNMPATQAQ FT LAFQFQGLADLASQIQAFQHLNLQWLQHIDGRLSTLPNPTAEANSNTNVGRLQGIERTL FT QGILATLREAQHQNHDYGEDFRAIKSQIDAIQALLQSSHATNPSLARPVLPPFEAEHTS FT HICRTFGSLVHAGHAITIPMDIQGRRPSTSLSLEIFSERRPDHTYLRMELLDGRILVHS FT FTTCPRFELTKLPGDALALLHQHYPAFLYNLDA" FT CDS 3264..5120 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D7PQV2" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:D7PQV2" FT /protein_id="ADI70513.1" FT /translation="MSPLTFGLPSATPSTVTSEAYWSPSGPLKASKACGMEHYKVLWPC FT KTIWLKSSPYSTHLAVQPYQTLKGQLPLFKGTSWASPRNSLPPPSICLQTCQQPRRNWP FT SNSRDWLTWPHRSKLSSTLIYSGCNTSTGGFQPFPTPLQRQTPIPMSGGFKALRGRCKA FT SWRLYAKRNIKIMTMGRTSELSKARLMLFKLYCKARTLPTHLWPDQFYPHSKQSIPLTF FT AEPLDLWFMQAMQSLFLWTSKAAVPRHPCPWRYSVREDLIILTCEWSYLMVESLCTPSP FT LARALSSPNYLAMRLPCSTNITLLSFTTWMRKMSVMFNQMVEILAIRTSFRSTSKMATT FT ETGLTSISSTPTTTGATTTAAGIQPATAPLPGATATLTSTPPAVGPLAPTSFAPSSSTL FT NAPSASGITIPERDSEHALQLPSLADLAGRFHSIEVNKVATVATIQAILSTLAAQQKPS FT TSADLADLAVACYQNGSSRLSAVTGNSASGHALAAIKGAVEKHCTLRQFCMYYAKVCYN FT FGRLTKQPPANWAAKGYKENSKYAAFDFFSGTLVPDSIVPPPAEGNMFKPSEEEILAHN FT LNAKLAIAESRGMQNQYSTRGNMLGMQQVREAPPPPLLTFTE" XX SQ Sequence 5242 BP; 1412 A; 1508 C; 1137 G; 1185 T; 0 other; atccaccgac accgtgatct ttgacgatta cgggaaaatg cctccgggat tcatagacgc 60 ctatctttcc atcaaaccga atgtggctaa tgctatactc acaggtgatc agaggcagag 120 cacataccac ttgcagaaga gtgacgccat gaccgctgaa gcttctgaca atgtaagcgc 180 gttcaccaag tactcagact actacatcaa cgcaacccat aggcagccca ggcgcttcgc 240 aaacgcgctt ggagtacacg ccgagcgtga tttcggcggc cacgtcaaag agacttccct 300 catacctcaa ggtgagcctg tgctggtacc ctcacacaaa gagatgatga ccttggcaga 360 ccttggacac aaagtgtaca cctattcagg ctgccagggg ttaaccgtgc caagagccac 420 ctttgtcatc gacagagaca ctccagcctg ctctgataac gtactctaca cagctctctc 480 tagagcttca gaaacggtga cctttgtgaa cacctattcc gatgatgcag gcttccaaag 540 caagctcgat gccctaccat acatcaagac atttctctct ggtgttaagg agtgcggaaa 600 tccgcctgac catcccccga cggaagagga gcctcctgaa gcacatgcaa agactcactt 660 gcccgtcgag aatccgaatc tcttacttga tgagcttatt gaacattgtg aggataaaga 720 caccagggaa atctttgtag acggtgagaa aaccaatctc gcccagacgc aagacttgac 780 catccaactc tttcctcatc aacaggcgaa agatgaagcc ctcttcaaag agacgatcaa 840 ggaaaggatt cgattcgcaa atcctgagga gaataacaaa gagctggcgg ctacagtgag 900 gattggagat ctactgtttg aagcttatgc tgactacatg aacgtgccta cagaggctag 960 tccgttcctg gaacaggagt ggctagacgc tcgtcaggaa gctgaaaaga agtatcttga 1020 gaaaacactt gcacagttaa ccaatggggc tccacgtcaa gatccagact tccccgacaa 1080 cttcatagcc ctttttaaca aatcacaatg ggtcaagaaa ctcgacaaag tgggggcaaa 1140 attcaaagca ggccaaacca tttcatcctt caagcaggag gtcgtactcc tcttcatcac 1200 catggccctc tacctccgca agcaacgcgt gaagcaccaa ccagattacg tgttcatcat 1260 gtgtgaaaag aacccatcag cttttaacga gttcatccaa ggctgggatt tctcaacccc 1320 gtcctacacg tcagactaca agcaatatga tcagtcgcag gacgccgtct tcctcaactt 1380 tgagctgcgg aaagccaagc actttggggt acctaagttt atcagagact gctataaatt 1440 cctcaagtgc aacgcgcgta catttgcagg caaactggca attatgaggc ttacgggtga 1500 ggggcccaca tttgatgcca acactgagtg caacattgcc tatgatgctc tgcgttttaa 1560 actcacaaag ggcaagaaag cttgctacgc cggagatgac ttagcacgcg aggagtgcgc 1620 tgaagaaagg agcagctggg catacctcaa cccctccttc aagctgacag cgaagcctat 1680 tgaaaccact cgccctgact tctgcgggtg gcgcattacc aaagagggca ttgtcaagca 1740 gcccaggcaa ttgtatcaat cactcgtgct aggcttcctg cgtggcaaca ttgcatccat 1800 gatcccatca tacaagattg acttcacata cgcttacaag atgggtgaca agctctttga 1860 aatctttgat gaggacgatc ttagctgcca tcaagccact gtgcgcctct tacacaagaa 1920 aggggttaag ctcgacatct ccacggacga tgagcacgtg tccaatgaag agccgccgtc 1980 cgaccgctta cttagcttcg aagttgagga atcaaagcca atccgcctac acacttcacc 2040 tctggaagct tggctgagca aacagtcaca cctgtgagcc ctgtagtccc ttataatcta 2100 gtaagtaggt aatttagcta tagatttatg tttcttcctt gtttgaacat gagtatatca 2160 gcagttattg acatagtaaa taaatcgcac tttgtaccct gctacccctg cacacaactg 2220 cccctcgtca ttaacggagt accgggatca ggaaagagca cacttctcaa ggaactgctt 2280 aatctgcata acgtccgcat ctacacagcc ggcataccct acggaagatc ccttaagact 2340 gaaggcgtac tcccactgag tgagttcaca agccgagcca accatctgtg catcctcgac 2400 gaataccaac ttgccactga taaagagctt gagccattcc aggtgttggt gggcgacccc 2460 ttccaaggag ctacacaccg cagacctcac ttcattgcca ccaccagctt cagagtgccc 2520 aaagcagtct gcgaacacct cagaagtaga gatttccaga tcgagagtga caaagaaggt 2580 gacctaatca agggatctcc attcaccaca gctgttgaag gagcgttact gcacttgggc 2640 caagtcagca aggaccttgc acactcacac aacgcttgct ctaaagatcc cacggaagtt 2700 caagggcttg aatttgacac agtgaccctg ctttaccact catctgagct atccaacaga 2760 attggattct acgttgcctg cactagagct tgcaagagat tgttgttgct ctctgatgag 2820 cacgtatgag cttctcagca ccgactaatt tctcgaagcc tctgctagcg attgccattg 2880 gcgtgggcgc cggcttactt atccatacac ttaggcggtc agaattgcct cacgccggtg 2940 acaacattca tcacctgcca cacggggggc tgtacaaaga cgggaacaag tgtatgcaca 3000 tcaacggccc gcacaagcca tccctcaaag caggatccac gggacccatt tatgctgtgc 3060 tcatcctcac tttactcatc attctctctg agcgttttac taggactagg cgcagttgca 3120 ctcacactgt tcttgcttga acctggtaaa ccttcctgcc gcatcaccat cactgggcac 3180 accacggtca tcgagaattg cgcagactta gctcacattc cagagatcat caaaagcttc 3240 tcgtggaccc actctgatga cttatgtcac ccttgacatt tggattacct tccgcgacac 3300 cgtctaccgt cacttccgag gcctactgga gtccctcagg gccattgaag gcttcaaagg 3360 cgtgtggaat ggagcactac aaggtgttat ggccctgcaa gacgatatgg ttgaagtcaa 3420 gtccatactc aacgcaccta gccgtccaac catatcagac gttgaaaggt cagctaccct 3480 tgttcaaagg aacttcctgg gcctctccga ggaactcatt gcctccgccc agcatttgct 3540 tacaaacatg ccagcaaccc aggcgcaact ggccttccaa ttccagggat tggctgactt 3600 ggcctcacag atccaagctt tccagcacct taatttacag tggctgcaac acatcgacgg 3660 gaggctttca acccttccca accccactgc agaggcaaac tccaatacca atgtcgggag 3720 gcttcaaggc attgagagga cgttgcaagg catcctggcg actctacgcg aagcgcaaca 3780 tcaaaatcat gactatgggg aggacttcag agctatcaaa agccagattg atgctattca 3840 agctctattg caaagctcgc acgctaccaa cccatctctg gcccgaccag ttctaccccc 3900 attcgaagca gagcatacct ctcacatttg ccgaaccttt ggatctctgg ttcatgcagg 3960 ccatgcaatc actattccta tggacatcca aggccgccgt ccctcgacat ccctgtcctt 4020 ggagatattc agtgagagaa gacctgatca tacttacctg cgaatggagc tacttgatgg 4080 tcgaatcctt gtgcactcct tcaccacttg cccgcgcttt gagctcacca aattacctgg 4140 cgatgcgctt gccctgctcc accaacatta ccctgctttc ctttacaact tggatgcgta 4200 aaatgtcagt tatgttcaac cagatggttg aaatccttgc catacgtacc tcatttcgaa 4260 gcacttcaaa aatggccact acggaaacag gtctgactag catctcaagc acacctacca 4320 caactggagc gacaaccact gctgcaggga ttcaacctgc cacagctcct ctgcccggtg 4380 caactgcaac tttgaccagc actcctccag cggtcggtcc cttagcacca acctcatttg 4440 ccccaagcag ctcaactctg aatgccccat ccgcaagcgg cattaccata cctgaacgcg 4500 actcagagca tgctttgcaa ctgccgtctc tcgctgacct tgctggcaga ttccatagca 4560 tcgaagtcaa caaagtcgcc actgttgcca caattcaggc cattctatct actctcgctg 4620 cgcaacagaa acccagcacc tctgccgact tagctgacct tgctgtagcc tgctaccaaa 4680 atgggtcttc cagacttagc gcggtcacgg gcaactcagc ttcaggacac gcgctcgctg 4740 ccataaaagg ggctgttgaa aaacactgca cactgcgcca attctgcatg tactacgcta 4800 aggtttgcta caactttggg cgtctgacca agcagccacc ggcgaattgg gccgctaagg 4860 gctacaagga aaattccaag tacgcggctt tcgacttctt ctcaggcacc ctcgtgcctg 4920 actcaattgt accacccccg gcagagggca acatgttcaa gccttccgag gaagaaatcc 4980 tagctcacaa cctgaatgcc aaacttgcta ttgcagagtc tcgcggaatg cagaaccagt 5040 actcaactcg tggcaacatg ctgggcatgc aacaagtgcg tgaagctcca ccaccacctc 5100 tactcacctt tacagagtga aataagtcac cttatgtgac ccttattgta ctattactac 5160 tatctgtgcc tcctcatctt gaggcgttta aacttaacat aaaaggcccc agtccgccgg 5220 actgggagaa aaaaaaaaaa aa 5242 //