ID GU901210; SV 1; linear; genomic RNA; STD; VRL; 5349 BP. XX AC GU901210; XX DT 21-APR-2010 (Rel. 104, Created) DT 21-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Satsuma dwarf virus isolate FJ segment RNA2, complete sequence. XX KW . XX OS Satsuma dwarf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-5349 RA Sun X., Wu G., Li Y.; RT "The complete sequence of Satsuma dwarf virus from China"; RL Unpublished. XX RN [2] RP 1-5349 RA Sun X., Wu G., Li Y.; RT ; RL Submitted (20-FEB-2010) to the INSDC. RL Lab of Plant Virology, College of Plant Protection, Southwest University, RL No. 1, Tiansheng Road, Chongqing 400716, China XX DR MD5; 1348dfd9ba26722cfa6072fc1c585381. XX FH Key Location/Qualifiers FH FT source 1..5349 FT /organism="Satsuma dwarf virus" FT /segment="RNA2" FT /host="Citrus unshiu Marc. cv. Miyagawa" FT /isolate="FJ" FT /mol_type="genomic RNA" FT /country="China:Chongqing, Fengjie" FT /collection_date="20-May-2009" FT /db_xref="taxon:47416" FT CDS 307..5031 FT /codon_start=1 FT /product="polyprotein" FT /note="contains movement protein and coat protein" FT /db_xref="GOA:D5LGN4" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D5LGN4" FT /protein_id="ADE87962.1" FT /translation="MEIYGFSPFSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIR FT ELPVGLVLKGVMAQYRSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQS FT KRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVRAAQKAARKAAKNFGFTISENPF FT SALPSEGRSAFSAGETPAPPACALPNICWAARRASTKSASPADVESLPFLGLLPESPRL FT RNEGLLSLLRAKLADFKAARAPLVPTAKRVIKTPSEDSIWESVEKSAPIVGCVINGMVG FT IPKNPIIQRLLPERKYIARKCVRAFVPQVMCSSRHKHDFAQLRNPDKWIIFPSVIRIST FT VDAYATARRLGLINDCSSALERVKAFSSHHLDLEKEVSRLEREVRAAPRKTIVARVFKS FT FFEEYALAHDEIVERLRAAKEDRRREHLTFLRNIKRQAHELELKERQSFLVAIEEARIK FT SLELKAKIEEGPPPQILYTPEWHVVQRAKAYADATMSPSERDIAHLAYENKYVNARAYP FT NTDVAARFRARCDAHFERIFGYAVHRGTRTETLTQVAESPPPIITAPVGQRVGGNPPTE FT TPGAAAVRAAMRRAVERNRPGPGESSAMPAREPLLSHRGQYYARSLSDRYNNIFSRNNA FT YNLMRETDVPIMEFTFGQQQDIAIPLSSRFGNHQSLHVGELEIAVQSSVLTGVDTAMAI FT MVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRLLRLSVLTGGSPM FT ADGRQVARLHYGLLGQAYTGAGEQRLTLYATRRINVRQTHVTQFLEGNHIHIARSEDRQ FT QPLPHMSLEFRPLSGSTRYVARPGGYQAIESGRQSVDITRNFIRMPTHLTRSATHREET FT PAPDNPNEQNVGRSEINAEIPTNSAEEEERRRRTPHGSAIHRGYTEFSERNENLIEHLY FT VPSMHGLSLKEDIHLFTKNLEIPSTADFCKELARYSVLTEAMSYRGASYYSRLLSGVAI FT LRPHFKFTFRLVTPILESIPLFVVWDDLGQLNTKVSLLSSAFQVIDSDHTRAAVYEVRP FT SGPTDLLTPSKANYGVGGDLVIFSGGYGSSSLSSPLRLKIEACLLKDTHLGSGEIALPQ FT GPSSMLSFHYLNEVDLGDVNMHIFLGSCKYKSSSTVGGRKYISVCPAAGLVHKGGKAAY FT LGLGASLFSLYNFWKGSYVLKVDVLSKGSCAGAISIYIPPPGSSADHYSQPQLDTLPRY FT ELPWRGSGSARFEVENFSWIGWHLTKPQRYITNEDWFSLNAGLLVALNQLPTTRTGGSS FT DIRVIFRIVKFKNLTLKERSTTCDIFAGIKDSEYTDPLVDVLDENITAPSASSLTTVQD FT PDLGLETTSSAQTSGLTTTRSFGAYYAYLLGGESAGNRWHSYVLPITMGHHREMIGASK FT TGYLNTQLDETIRIRYSLRNPLHILCSAGAYYAVDLLFTLVVDGDHGAERAYTQLGLIQ FT TPLMEYFDGYSASRNLSSEGGYSNQLGVGKSYVQLIVPRRNYRARSITTNTGALFFETI FT GSLTVKFAVSAKIKGVHLYVEPVGPIDVDGYGRGADISLTNENFVLMPSLRTAA" XX SQ Sequence 5349 BP; 1267 A; 1242 C; 1306 G; 1534 T; 0 other; ttgattcaag cgaagtggaa gccccacaca aaaaccatct tgttgtactc tctctctctc 60 tcactgagtc acatttactt ttgatgatga cttcttcttc actttttctt tcgatgttcg 120 ggatagcgcc cgttcaccac tgatactagg gatagcgccc tagtttcgat tgctgggata 180 gcgcccagtt tcttttgtta atatttcgat attttcattt tgtaatttcg attacttttc 240 ttttatatta aattaaaacc aaaaagattt tcccatttct ttgatttctt ttttgtttat 300 ttctttatgg agatctacgg attctccccc ttctccttcc aggacaccga gtcctggaag 360 aactctgctt tcgcagcctg ccgcggctgc aagacctacc ccatcgagga ggtaggtact 420 gacggatccg tgaggatccg ggagctcccg gtggggctcg tactaaaggg cgtcatggcc 480 caatatcggt ccattttatg gacccaattt gtggcggatc ccgccactac caccgtggac 540 cggaagtcct ttgacttctg gctcttttgc cgccgtgctg aggcggccca ggaacgagcc 600 tttagggctc gccaatccaa gcgagccgcc aaggccgctg ccctcgatgc tgagggctta 660 attgatcgct cctacaaggg gcgaacctac aaggtctctg tgcggggcct ttcgtggaaa 720 tctgtgcggg ctgcacagaa ggctgccagg aaggcagcca aaaattttgg attcaccatt 780 tcggagaatc ccttctcggc actcccatct gaagggagat ctgccttttc tgcgggtgaa 840 actcccgctc ctcctgcctg cgcgctcccc aatatttgtt gggcggctcg cagggcttcc 900 acgaagtccg cctctcctgc ggacgtagag agtttgccct ttttgggctt actcccggag 960 tctccccgcc tccgaaatga ggggttgctc tctttattga gagccaagtt ggccgacttc 1020 aaggctgcgc gggcaccgct agtgcccaca gctaagaggg tcatcaagac cccttccgaa 1080 gactccatct gggagtctgt ggagaagagc gccccgattg tcgggtgcgt tataaatggt 1140 atggttggga ttcccaaaaa cccaatcatt cagcgtcttc tccctgagcg caaatatatt 1200 gcgcgcaaat gcgtccgggc ttttgttcct caagtgatgt gttcgtcaag acacaaacat 1260 gattttgccc agttgcggaa tcctgataag tggattattt tcccatctgt gattaggatt 1320 tccactgtgg acgcttacgc cacagccagg cgccttgggc ttataaatga ctgttcttcg 1380 gctctcgagc gagtcaaggc attttcctct caccatctag acttagagaa ggaagtgtct 1440 cgcctcgaac gagaagttcg cgcagccccg cggaaaacga tagtagctag ggtgttcaaa 1500 tccttctttg aagaatatgc tctagcacac gatgaaatcg tggaaaggct tagggctgct 1560 aaagaggata ggcgcaggga acatttgact ttcctgcgca atatcaagcg ccaggctcac 1620 gagcttgaat tgaaggaacg ccaatctttt ttggtggcta ttgaagaagc tcgtattaag 1680 tcccttgagc tcaaggctaa aattgaagag ggtcctcccc ctcaaatttt atatacccca 1740 gagtggcatg ttgttcagcg agcaaaagct tatgctgatg ctacaatgtc gcccagcgaa 1800 agggatatag cgcatttggc ttatgaaaat aagtacgtca atgctcgtgc gtatccaaat 1860 acggatgtcg ctgcgagatt tagagcacgt tgtgatgcgc attttgaaag gattttcgga 1920 tatgctgtgc accgaggcac aagaaccgaa acgttgactc aggttgctga gtctcctccg 1980 ccaattatca ctgcgcctgt tgggcaaagg gttggaggaa atccgccaac agaaacaccg 2040 ggagctgctg ccgtgcgtgc tgcaatgcga cgtgcggtcg agcgcaatcg acctgggcct 2100 ggagagtcat cggctatgcc agctcgggag cccctcttgt ctcatagagg gcaatattat 2160 gcacgctccc tttcggatag atataacaat atcttctcgc gcaacaatgc ctataattta 2220 atgcgcgaga ctgacgtgcc cattatggag tttacgtttg ggcagcagca agatattgct 2280 attcctctat cctcccgatt cggaaatcat caatctttac acgttggtga actggaaatt 2340 gccgtacaat cctcggtttt gaccggagtt gatacggcga tggctataat ggtttccgac 2400 gcctcccatg atcgtcttga agagggattc ttaagtctca ctattttaag attgggagcc 2460 gggtggatgc gccacactat ccccatagga attacagttt tcccaactga cccattagtc 2520 gatagacttt tgcgattatc agttttgact ggtgggtcac ctatggcgga tggtaggcaa 2580 gtggccagat tacattatgg attacttggc caagcctata caggcgctgg cgagcagcga 2640 ttaacgctgt atgccaccag aaggataaat gtgcgtcaaa cgcacgttac tcagtttctg 2700 gagggcaatc atatccatat tgctcgctcc gaggatagac aacagccact ccctcatatg 2760 agtttggagt ttaggcctct atccggaagc accaggtatg ttgcacgacc tggaggatat 2820 caagctattg aaagtggcag gcagagtgtg gatatcacgc gaaattttat tcgcatgcct 2880 acgcacttaa cgcgaagtgc aacgcatcgg gaggaaactc ccgcacccga caatccaaat 2940 gagcagaatg ttggcagaag cgagatcaac gctgaaatcc cgacaaattc tgccgaggag 3000 gaagaaaggc gtcggaggac gcctcatgga tctgctattc atcggggtta tacagagttc 3060 tccgagcgga acgaaaatct tattgaacat ctttacgttc cgtctatgca tggtctatct 3120 ctcaaggaag atatacatct tttcactaag aaccttgaga taccgagtac tgccgatttc 3180 tgtaaggaat tggcaagata ctcggtttta acagaggcta tgagttatag gggtgcaagt 3240 tactattcac ggctcttgtc cggggttgct atattgcgtc cccattttaa gtttactttt 3300 agacttgtga cccctatcct tgaatccata cccctttttg ttgtctggga tgatttgggc 3360 caattaaaca ctaaggtctc cttattatct tctgcttttc aggtgatcga ttccgatcat 3420 acgagggcag cagtgtatga ggttagacct tctgggccaa ctgatctcct taccccttcg 3480 aaagccaact atggggttgg aggagattta gttatcttct cagggggtta tggttcctcc 3540 tccctctcct cacctttgcg cctcaaaatt gaagcgtgtc ttcttaaaga cacgcatctt 3600 ggttctggtg agattgctct accccaaggt ccatcttcca tgctctcatt tcattatttg 3660 aatgaggtgg atcttggtga tgtgaatatg cacatatttt taggtagttg taagtataaa 3720 tcctcttcta ccgttggtgg tagaaagtac atatctgtgt gtccagcagc gggtcttgta 3780 cataagggtg gaaaagctgc ttatttaggt ttaggagctt cccttttttc cctatataat 3840 ttttggaagg ggagctatgt tctcaaggtt gacgttctgt caaagggtag ttgcgctggt 3900 gcgatatcaa tttacattcc gccaccaggc tcaagcgctg atcactactc tcaaccgcaa 3960 ctggacactc ttcccaggta tgagttgccc tggagaggtt cgggatccgc cagattcgaa 4020 gtcgaaaatt tttcttggat tggttggcat ctgacaaaac cgcagcgata tataaccaat 4080 gaagactggt tttcgctgaa tgctggtttg ttggttgctc tcaatcaact acctacaact 4140 agaactggcg gttctagtga tataagagtg atattccgaa ttgttaaatt taaaaatctc 4200 actcttaaag aacgttcaac aacctgcgat atatttgcag gtattaaaga ctcggagtat 4260 acagatcctc tagtggacgt gctagatgaa aacatcacgg caccatccgc ttcttcattg 4320 acgacggtcc aagatccaga ccttggactg gaaactactt cgagcgccca gacttctgga 4380 ctgaccacca cgcgtagttt tggagcgtat tacgcttatc ttcttggtgg cgaaagtgct 4440 ggaaataggt ggcactctta tgtgttgcct attactatgg gacaccacag ggagatgata 4500 ggagcatcta agactgggta tttaaatact cagcttgatg agaccatacg gattcgctat 4560 tctttgcgga atccgttaca tattttgtgc tcagctggag cgtattatgc ggttgacctc 4620 ctatttactc ttgttgtgga cggtgatcat ggagccgaac gtgcctacac tcaactgggt 4680 ttaattcaaa cgccactcat ggaatatttt gatggatatt ctgcgagtag aaatctctct 4740 tcagaagggg ggtattcgaa ccaattgggt gtgggaaaat cttacgttca gttgattgtc 4800 ccacgaagga actacagagc tagatctatc acgactaata ctggtgcgct cttctttgaa 4860 accattggat cgctgacggt taaattcgct gttagcgcta agatcaaggg agtacatctg 4920 tacgttgagc ctgtaggacc tatcgatgtt gatgggtatg ggcggggagc ggacatatct 4980 ctaactaatg agaattttgt cctgatgccc tcgctgcgta cagctgctta attgcggcat 5040 ttggtgttcc cagtcggacc tttaacactg gggtttgaga acggaaagaa attttctagg 5100 gatttctttc aatttaagtg atgcccaccg gactttaacg tggggttatg gcttctctct 5160 gcggcctgat gcagagttgt acattaataa ctagtgtgtt tatttttgtg tgtttgtttt 5220 gtttgttttg acataaaata aactgagttt caaaaagggt ttctcgagtt cttccctttc 5280 cgactcagga gcttggcgtg tttttcttga tttctgtcgc cggtttcaat cagtgaaagt 5340 ctgatggcc 5349 //