ID GU810903; SV 1; linear; genomic RNA; STD; VRL; 6068 BP. XX AC GU810903; XX DT 16-JUN-2010 (Rel. 105, Created) DT 08-JUL-2010 (Rel. 105, Last updated, Version 2) XX DE Broad bean true mosaic virus isolate EV-11 segment RNA1, complete sequence. XX KW . XX OS Broad bean true mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-6068 RX DOI; 10.1007/s00705-010-0668-2. RX PUBMED; 20496090. RA Petrzik K.; RT "Complete genome sequence of broad bean true mosaic virus"; RL Arch. Virol. 155(7):1179-1181(2010). XX RN [2] RP 1-6068 RA Petrzik K.; RT ; RL Submitted (17-FEB-2010) to the INSDC. RL Department of Plant Virology, Biology Centre Academy of Sciences of the RL Czech Republic, Branisovska 31, Ceske Budejovice 370 05, Czech Republic XX DR MD5; 29783527d6b536e1adb47da83fe4ffd2. XX CC GenBank Accession Numbers GU810904-GU810905 represent sequences CC from the two segments of Broad bean true mosaic virus. XX FH Key Location/Qualifiers FH FT source 1..6068 FT /organism="Broad bean true mosaic virus" FT /segment="RNA1" FT /lab_host="Vicia faba" FT /isolate="EV-11" FT /mol_type="genomic RNA" FT /country="Germany" FT /db_xref="taxon:649890" FT CDS 313..5904 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D7PPR0" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:D7PPR0" FT /protein_id="ADI60054.1" FT /translation="MYTLVFKAGQSVAEIISQVRCNEFMQHVVWYSKDEECHVEDITYT FT SAMNKVKKDVGLVAISCVALALEINSGVLCDIEYPAVEFLYERFTVHCYYLTSHKHGYR FT DLMEFNKAMFLKHLNAELTLTGELPVLEKIPVMEAQGLKNFVSGVANWIPLKIKGMVGW FT TVDAILDSFRNYFNKLIEEKIPMAARVCSWVTTVWAKLVEWIKSSKEAMVAFFAGCEEL FT LTWGLATMVAACALGVLEQILLHTNIISESYNLAEMFLQTGVVAVACYNFHSASRGFAE FT LMRILGVTVAAVSLVIARSFSHRHGTKKITTAQGPIDMLETISNSLGASSQASLVTVGR FT SCTAINAIATSVGHLKNFAGKILSLLRDFAWENLGLEARFLTDASLIFGEDVDGWLKGI FT SALKDAFIAKSYCNQDEMLEMNILLERGYTMRKSMVAQMRITPAISNMILKGIEDLEKL FT HRTSSVQGVKGVRKMPFTIFCHGGSRCGKSLLVNKLVCDFQEKLGLGEDTAYARNMNDP FT YWSGYRRQPIVTVDDFGAVRGDISAEAQLINLVSSSPYPLSMASIEEKGMAFDSQFIFC FT STNFLEVDPEAGVRDDIAFKNRRHILVTVSLKQGEEYNPNDFTSNQIYEVKKFVHDRYQ FT IIHRFESYSDFLAFCFTKHEQHVEEQNANLVGLMRKSVFSSHFGKFEQILQLGTFLSDA FT PNLMAQAQALTAEEEYYHLYSVPRGNTYFHVAANLRKEIQCWEGPVLDSEKEVVLRDSE FT NKLIGAYEFLLLSKELNVVIHNHLQELVCVDNYDRNLNFVGTIVDAHYHQQLVGNIASL FT KPWHRAILYGIGCLMERTKKATWYETMWNSIKEVLYTAYKTEIADWPVPLKVIVGIVLA FT GVAGSAFWQVFETLKHASGGGTLVGAAMAGFSTVSAAEAQSRKPNRHDQEQHRYRNVPL FT TRRNWATAQMSLHQSSVAIMSKCNATFVMGSSHIQITLVPGRRFIGYSHFFKMLGNYSR FT MVRIVTDKRSYYHHYQPENMEFIKDSELCVYTSSSLEDISHSCWDLFCWDPEKDLPKKF FT KADFVCCKWDKNAGTYNPTYADINVSLNTEPLVIMDGEYQQKVPVSLAYKAPTITEDCG FT SMIIAEIGGKRKLVGIHVAGRDGEMGFAALLPPLEPIAQAQGAEKHFDFFPFVQEAQKG FT VSMVGTLKPGLYVPTPTKTSLVETPVEWHLETPCDKIPSVLVKGDERLKGTEHEEYDPF FT WSGINKYAEPMDTLDSVLLNEVAQDIVEEWFDCAGDEFDFGEVSIDEALNGIEAVDYMD FT RIPLATSEGFPHVLSRKNGEKGKRRFVEGDGHVVNLIPGTSVHEAYLELCKTIEHSVPE FT LVGIECPKDEKLPMRKIFSKPKTRCFTILPMEYNILVRQLFLRFVRFIMKSRDKLSCQV FT GINPYSLEWSGLAARLKKNGDNILCCDYSSFDGLLSKQVMEVMANMINTLCKGDEATQR FT KRKNLLMACCSRIAICKDKVWKVECGIPSGFPLTVICNSIFNEILVRYYYKRILKRQNA FT PSFACRKFNQSVTLVTYGDDNLISVNAVIKPYFDGTKLKHEMASQGIIITDGKDKTSAT FT LSFRKLEECDFLKRGFKKRSSVRMDSPEDENSLWAQLHYVNVNNCEQQEAYLTNLRSVL FT RELYMHDPKEMVDFRRKAIAQIPWIQSQDLPTSFQLREFYAEQREMNCSDPGGESDLLT FT SVDLLGPALIKQGRPEPVLKITEKYEVVDLAQVAYDRETTKNEVWLLFNVGYPQSSLPK FT GHHVVTWTVGTGRGGLPTQSWMSLNVARRESHLNKVVRTAFKEGKTIKFAVRSNVIPVN FT LVAFLFAVRNDIVQVDTSNAVLSNVISQSKSLNYLTDECEFAFFSARK" FT mat_peptide 313..1254 FT /product="proteinase cofactor" FT /note="Co-Pro" FT mat_peptide 1255..3045 FT /product="helicase" FT /note="Hel" FT mat_peptide 3046..3129 FT /product="VPg protein" FT /note="VPg" FT mat_peptide 3130..3756 FT /product="proteinase" FT /note="Pro" FT mat_peptide 3757..5901 FT /product="RNA-dependent RNA polymerase" FT /note="Pol" XX SQ Sequence 6068 BP; 1679 A; 1037 C; 1471 G; 1881 T; 0 other; attaaaattt ttatgcaaaa ttttgaataa ccgcaaacgt ggcgaaagtc ttctttcttt 60 tctcctttcc ttctcttaca aagcgaacgg ttacttttca ttgctcactt ttcttttaaa 120 gaataaccga ggcgatcccc tccgtgttat tgcaataacc gcgaacgtga cgaaagtcga 180 aactctcttt cttctccttt ctttctcaaa agcaaacggt tacttttctt ctctccctct 240 cttcaaagtg aacttttctc ttctgcaaac aagtctactg caagttgtta gtgtattcag 300 ctgtattaaa tcatgtatac attagtattc aaggcgggtc agagtgttgc agagattatt 360 tctcaagtcc gatgcaatga gtttatgcaa catgttgtgt ggtactccaa agatgaggag 420 tgccatgtag aggatattac ctataccagc gctatgaaca aagttaagaa ggatgttggt 480 ttggtcgcta tttcatgtgt agcgctagct ttggaaataa acagtggtgt tctttgtgat 540 atagaatatc ctgctgttga gtttttgtat gagcgtttta ctgttcattg ttactattta 600 actagtcata agcatggata cagggactta atggaattca ataaggctat gtttcttaag 660 catttaaatg cagaattgac cttaaccggg gagcttcccg tgttggagaa aattcctgtt 720 atggaagcac aaggccttaa aaactttgtt agtggagttg caaattggat tccattaaaa 780 atcaaaggaa tggttggatg gactgttgac gccattttgg attcctttcg caattacttt 840 aataagctaa ttgaggaaaa aattcctatg gctgcgcgag tttgctcatg ggttacaaca 900 gtgtgggcaa agctggtgga atggataaag tctagtaaag aagccatggt ggctttcttt 960 gcaggctgtg aagaacttct aacttggggt ttggctacca tggttgctgc atgcgctctg 1020 ggtgtgttgg agcaaatact tttgcataca aacatcatta gcgagtccta caatctggct 1080 gagatgtttc tacagacagg cgtggtagct gtggcttgct ataatttcca tagtgccagc 1140 aggggttttg cggagctgat gcgtatattg ggtgtgacag tggcagctgt ttccctagta 1200 atagctcgct ctttttccca taggcatggt accaagaaaa tcactacagc acagggtcct 1260 attgacatgt tagagactat ctctaatagt cttggggctt cgtctcaggc atctctagtg 1320 acagttgggc gtagttgcac tgcaattaat gctatagcta ctagtgtagg ccaccttaaa 1380 aattttgctg ggaaaattct ttctttgttg agagattttg cttgggaaaa tttgggtttg 1440 gaagcgcgtt ttttaactga tgcctctcta atctttggag aggatgttga tggttggctc 1500 aagggcatta gtgcattgaa agatgctttc attgcaaaat cttactgcaa ccaggatgag 1560 atgttggaaa tgaacatttt gctggaacga ggatatacca tgaggaaatc tatggtagcg 1620 caaatgagga taacaccagc aatttccaac atgattctca agggcataga agatttggaa 1680 aaattacaca gaacttcttc cgtgcaagga gtcaaaggag tgcggaaaat gccattcacc 1740 attttctgtc atggaggatc acgttgtggc aaatccttat tggtgaataa gctcgtgtgt 1800 gattttcagg aaaaactggg tcttggtgaa gataccgctt atgcgcgcaa tatgaatgat 1860 ccttattgga gtggttatag gcgtcagcct attgtcaccg ttgatgattt tggtgctgtt 1920 agaggagata ttagcgcaga ggctcaatta ataaatttgg tatcaagttc tccctatccc 1980 ctgtcaatgg cttctattga ggaaaaagga atggcatttg attcacaatt tattttttgt 2040 tctactaatt tcttagaggt ggatcctgaa gcaggtgtgc gtgatgatat agcttttaag 2100 aacagacgtc acatcttggt tactgtaagt ctcaaacaag gggaagagta caatcccaat 2160 gattttactt cgaatcagat ctatgaagtc aagaagtttg tgcatgacag atatcagatc 2220 attcatagat ttgagagcta ttcagacttt ctggcttttt gtttcacaaa acacgaacag 2280 cacgtggaag aacaaaatgc caacttggta ggcttgatga gaaagagtgt tttttcctca 2340 cactttggaa aatttgaaca gattcttcag ctcggaactt ttctatctga cgccccaaat 2400 ttaatggctc aagctcaggc acttactgcg gaagaggaat attaccatct ttattctgtt 2460 ccgcggggca atacgtactt tcatgttgct gctaacttgc ggaaagaaat acagtgttgg 2520 gaagggcctg tgttggattc agaaaaagag gtcgtgttgc gggatagtga gaataagtta 2580 attggggcct atgaattcct gcttttatcc aaagagttga atgtggttat tcataaccat 2640 ctccaagaac ttgtgtgtgt ggataactat gacagaaatt tgaattttgt tggaactata 2700 gtggatgctc actaccacca gcagttggtg ggaaatattg cttcactaaa gccctggcat 2760 agagccattt tgtatggtat agggtgcctg atggagagga caaagaaagc cacatggtat 2820 gaaactatgt ggaattctat taaggaggtg ctctatacgg cttacaaaac ggaaattgct 2880 gattggcctg tgcctttgaa agtcattgtt ggtattgttc ttgcaggagt tgcgggtagt 2940 gctttttggc aggtatttga gacattgaag catgctagtg gaggtggaac cctagttggt 3000 gccgcgatgg cgggcttttc gacagtgtct gctgctgagg ctcaaagcag aaaacccaac 3060 cgccatgatc aggaacagca taggtatcgt aatgtgcctc ttaccaggag aaattgggca 3120 actgctcaga tgtcactgca tcagagtagt gttgcaatca tgagcaaatg caatgcaaca 3180 tttgttatgg gatcttctca tattcaaatc actttggttc ctggtaggag atttattggt 3240 tattcccatt tcttcaaaat gctagggaat tattctagaa tggtgcgcat agttactgac 3300 aagcgttcat actaccacca ttaccagcca gagaacatgg agtttattaa ggattcagag 3360 ttgtgtgtgt acactagcag tagtcttgaa gacatttctc attcgtgttg ggatcttttt 3420 tgttgggatc cggaaaaaga ccttccaaag aagtttaaag ctgattttgt gtgctgcaaa 3480 tgggacaaga atgctggaac ttacaatcca acttatgctg atatcaatgt gtctctaaac 3540 acagaaccat tggtcataat ggatggtgag taccaacaga aggtaccagt tagtttggct 3600 tacaaggctc ctactataac agaggattgt ggttctatga ttattgcgga gattggggga 3660 aaaagaaagc tggttggcat acatgtggca ggaagagatg gtgaaatggg ctttgctgct 3720 ctattgccac ctttagaacc tattgctcag gcccagggag ctgaaaagca ctttgatttc 3780 tttccttttg tgcaagaagc ccagaaagga gtgtctatgg tgggcacgct gaaacctggt 3840 ttgtatgtac caactcctac caagacgtca ttggtggaaa cacctgtaga atggcatctg 3900 gagaccccat gtgataagat tccctcagtc ttggtgaagg gagatgaaag gttgaaaggt 3960 acggagcatg aggaatatga tcctttttgg tctggcatca ataagtatgc agaacctatg 4020 gatacactgg atagtgtttt gttgaatgaa gttgctcagg atattgtgga agaatggttt 4080 gattgtgctg gtgatgagtt tgattttggg gaagtgtcta ttgatgaggc cttaaatggt 4140 atcgaagcag ttgactatat ggaccgcata ccccttgcta cttctgaagg ttttccacat 4200 gtcctatcta gaaaaaatgg agaaaagggc aagcggcgtt ttgtggaagg agatggacat 4260 gttgtaaatc tcattccggg aacttctgtg cacgaggctt atctggagtt gtgtaaaact 4320 attgagcatt ccgtgcctga attggttggc atagagtgcc ctaaggacga aaaactaccc 4380 atgaggaaga ttttttccaa acctaaaaca aggtgtttta caattttgcc catggagtac 4440 aacattttgg tgcggcaatt gttcttgcgt ttcgtgcgat ttattatgaa gagtagggac 4500 aagctttctt gccaagttgg tattaatccc tacagtttgg aatggagtgg tttggctgca 4560 agacttaaga aaaatggaga caacattttg tgttgtgact acagttcttt tgatggcttg 4620 ctgtcgaagc aagttatgga agttatggct aatatgataa atactctttg caaaggggat 4680 gaggccacac agagaaagcg gaaaaatttg ttgatggctt gctgttcaag aattgctatt 4740 tgcaaggaca aggtttggaa agttgagtgc ggtattcctt caggttttcc tctgactgtg 4800 atatgtaaca gtattttcaa tgaaattctc gtgcgttatt attacaagag aattttgaag 4860 cggcagaatg ctccttcttt cgcatgtaga aagttcaacc aatcggtgac gcttgtgaca 4920 tatggggatg ataacttgat ttcagtgaat gctgtgatca aaccttactt tgatggcacc 4980 aagcttaagc atgagatggc tagccaagga atcatcatca cagatggtaa ggacaagaca 5040 agtgctactt tgtctttcag gaaattggaa gagtgtgatt ttcttaaaag aggtttcaag 5100 aagcgatcca gtgtacgcat ggattctcca gaggacgaga acagtttatg ggcccagttg 5160 cattatgtta atgtgaacaa ttgtgagcaa caagaagcct acttgacaaa tctgcgtagt 5220 gtattgcgag agctttacat gcatgatccc aaggaaatgg ttgatttcag aagaaaagct 5280 atagcgcaga taccttggat tcagagtcaa gatttaccta ctagctttca attgcgtgaa 5340 ttctatgcag agcaaagaga gatgaattgc tctgatcctg gaggtgagag tgatttgtta 5400 actagtgttg atttgttagg accagctctg ataaagcaag gtagaccaga acctgtgctt 5460 aagattactg agaagtatga ggtggtagac ctggcacaag tggcatatga tagggaaacc 5520 actaagaatg aagtgtggct actttttaat gtgggttatc cccaatcttc ccttcctaag 5580 ggccaccatg tagttacttg gactgtggga acaggaagag gtggtttgcc cacccaatct 5640 tggatgagtt taaatgtggc tcgaagagaa tcccacttga ataaagtggt gagaactgct 5700 tttaaagaag ggaaaactat caaatttgcc gtgagatcaa atgttatacc agtaaatttg 5760 gtggcctttc tttttgctgt gcggaatgac attgtacagg tggatacttc caatgctgtc 5820 ctgagtaatg ttatttctca aagcaaatct ctaaattatc tcacggatga atgtgaattt 5880 gctttcttct ctgccaggaa gtagcgtgtt cacataggta ttgaaaacct taagatttcg 5940 cccacactgg gggaagtacc agttttgtaa tatattgcaa gtgaatttat ttggttcagt 6000 gtgcttagtt tgtttgcttt gctgtttctt ttagcttagt ttctttaagt tatttgcttg 6060 ctttatta 6068 //