ID   GU797474; SV 1; linear; genomic RNA; STD; VRL; 1371 BP.
XX
AC   GU797474;
XX
DT   13-DEC-2010 (Rel. 107, Created)
DT   13-DEC-2010 (Rel. 107, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Merida-Chiguara HC-Pro gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   "Sequence variability of Papaya ringspot virus based on the HC-Pro coding
RT   sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   ;
RL   Submitted (15-FEB-2010) to the INSDC.
RL   Centro Jardin Botanico, Universidad de Los Andes, La Hechicera, Merida
RL   5101, Venezuela
XX
DR   MD5; e434f0943a3d5f3289379fc39d3f5155.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1371
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="Merida-Chiguara"
FT                   /mol_type="genomic RNA"
FT                   /country="Venezuela"
FT                   /collection_date="2005"
FT                   /note="biotype: P"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>1371
FT                   /codon_start=1
FT                   /product="HC-Pro"
FT                   /note="helper component (aphid transmissibility) and
FT                   protease"
FT                   /db_xref="GOA:E5E230"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:E5E230"
FT                   /protein_id="ADR66827.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRRPTDHTCTSDMDVTMCGEVAALATII
FT                   LFPCHKITCHTCMNRVKGRVIDEVGEDLNCELERLRETLSSYGGSFGHVSTLLDQLNRV
FT                   LNARNKNDKAFKEIAKKIDAKKESPWTHMTVINNTLIKGSLTTGYEFERASDNLLEIVR
FT                   WHLKRTESIKAGSVESFRNKRSGKAHFNSALTCDNQLDRNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEYYSQRQNPNGIRKIAIGNLVFSTNLERFRQQMVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKK
FT                   GYCYMNIFLAMLINIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLIIFHPDAA
FT                   NAELPRILVDHRQKTMHVIDSLGSVDSGYHILKANTVNQLIQFAREPLDSEMKHYIVG"
XX
SQ   Sequence 1371 BP; 431 A; 263 C; 316 G; 361 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctcggt tttaataggg cttttctacg gcatagaaga        60
     ccaacggacc acacatgcac gtctgacatg gatgttacaa tgtgtggaga agtagcagct       120
     cttgcaacca taatcctgtt tccgtgccac aaaataactt gccacacttg catgaacaga       180
     gtaaagggaa gggttattga cgaagtcggt gaggatttga attgtgagct tgaacgtttg       240
     cgtgaaactc tttcatcata tggagggtca ttcggacatg tctcaacatt acttgatcaa       300
     cttaacagag tcttgaatgc gagaaacaag aacgataaag cttttaaaga aatcgcgaag       360
     aagatcgatg caaagaaaga gagtccttgg actcacatga cagtcatcaa caatacgctc       420
     atcaaaggtt cgctgacaac tggctacgaa tttgaaagag cgtctgataa tctcctggag       480
     atcgtaagat ggcatctcaa aagaacagaa tcaataaaag ctggcagtgt tgaaagtttt       540
     agaaataagc gatctggaaa agctcacttc aactcagctc tcacgtgtga taatcagttg       600
     gacagaaatg gtaatttctt gtggggtgag aggcaatacc acgccaaaag attctttgcc       660
     aactattttg agaagattga ccatagtaag ggttatgagt actatagtca acgccaaaac       720
     ccaaatggta tcaggaaaat tgccattggc aacttggtat tttcaacaaa tttggagaga       780
     tttcggcaac aaatggttga acaccacatt gatcaaggac caattactcg tgagtgcatc       840
     gcattgcgta ataataacta tgtccatgtt tgtagctgcg taactctaga tgatggaact       900
     ccagcgacaa gcgagttgaa gactcctacc aagaatcata tcgttcttgg taattctggt       960
     gatcctaagt acgttgacct accgactctt gagtctgatt cgatgtacat agccaagaag      1020
     ggttattgtt acatgaatat cttcttagcg atgcttataa acatacctga gaatgaggca      1080
     aaggatttca caaagagagt tcgtgacctt gtgggttcaa agcttggaga gtggccaacg      1140
     atgttagatg tcgcaacatg tgcgaatcag ttgataatct ttcatcctga tgcagccaac      1200
     gcagagttgc cgcgaattct agtggatcac cgacagaaaa cgatgcatgt cattgactct      1260
     ctcgggtctg tggattctgg gtatcatata ttgaaggcaa acacagttaa tcagttgatc      1320
     caattcgcta gggagccact cgatagtgaa atgaagcact acattgtcgg c               1371
//