ID   GU797473; SV 1; linear; genomic RNA; STD; VRL; 1371 BP.
XX
AC   GU797473;
XX
DT   13-DEC-2010 (Rel. 107, Created)
DT   13-DEC-2010 (Rel. 107, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Trujillo-Rio Poco HC-Pro gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   "Sequence variability of Papaya ringspot virus based on the HC-Pro coding
RT   sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   ;
RL   Submitted (15-FEB-2010) to the INSDC.
RL   Centro Jardin Botanico, Universidad de Los Andes, La Hechicera, Merida
RL   5101, Venezuela
XX
DR   MD5; 7bdee90d6cba50128fe938c1344813b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1371
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="Trujillo-Rio Poco"
FT                   /mol_type="genomic RNA"
FT                   /country="Venezuela"
FT                   /collection_date="2005"
FT                   /note="biotype: P"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>1371
FT                   /codon_start=1
FT                   /product="HC-Pro"
FT                   /note="helper component (aphid transmissibility) and
FT                   protease"
FT                   /db_xref="GOA:E5E229"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:E5E229"
FT                   /protein_id="ADR66826.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATII
FT                   LFPCHKITCNTCMNKVKGRVIDEVGEDLNCELERLRETLSSYGGSFGHVSTLLDQLNRV
FT                   LNARNKNDKAFKEIAKKIDAKKESPWTHMTVINNTLIKGSLATGYEFERASDNLLEIAR
FT                   WHLKRTESIKAGSVESFRNKRSGKAHFNPALTCDNQLDRNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEYYSQRQNPNGIRKIAIGNLVFSTNLERFRQQMVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKK
FT                   GYCYMNIFLAMLINIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLIIFHPDAA
FT                   NAELPRILVDHRQKTMHVIDSFGSVDSGYHILKANTVNQLIQFAREPLDSEMKHYIVG"
XX
SQ   Sequence 1371 BP; 435 A; 255 C; 316 G; 365 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctgggt tttaataggg cttttctacg gcatagaaaa        60
     ccaacggacc acacttgtac gtctgacatg gatgttacaa tgtgtggaga ggtggcagct       120
     cttgcaacta taatcctgtt tccgtgccac aagataactt gcaacacttg catgaacaaa       180
     gtaaagggaa gggttattga tgaagtcggt gaggatttga attgtgaact tgaacgtttg       240
     cgtgaaactc tttcatcata tggagggtca ttcggacatg tctcaacatt acttgatcaa       300
     cttaacagag tcttaaatgc gcgaaacaaa aacgataaag catttaaaga aatcgcgaag       360
     aaaattgatg caaagaaaga gagtccttgg actcacatga cagtcatcaa caatacgctc       420
     atcaaaggtt cgctagcaac tggctacgaa tttgaaagag cgtctgataa tctcctggag       480
     atcgcgagat ggcatctcaa aaggacagaa tcaataaaag caggcagcgt tgaaagcttt       540
     agaaataaac ggtctggaaa agctcacttc aacccagctc tcacgtgtga taatcagttg       600
     gacagaaatg gtaatttctt gtggggtgaa aggcaatacc acgccaaaag attcttcgcc       660
     aactattttg agaagattga tcatagtaag ggttatgagt actatagtca acgccaaaac       720
     ccaaatggta tcaggaaaat cgccattggc aatttggtat tttcaacaaa tttggagaga       780
     tttcggcagc aaatggttga acaccacatt gatcaaggac caattactcg tgagtgcatc       840
     gcattgcgta ataataatta tgttcatgtt tgtagctgcg taactctaga tgatggaact       900
     ccggcgacaa gtgagttgaa gactcctaca aagaatcata ttgttcttgg aaattctggt       960
     gatcctaagt acgttgacct accgactctt gagtctgatt cgatgtacat agccaagaag      1020
     ggttattgtt acatgaatat ctttttagcg atgcttataa acatacctga gaatgaggca      1080
     aaggatttca caaagagagt tcgtgacctt gtgggttcaa aacttggaga gtggccaacg      1140
     atgttagatg tcgcgacatg tgcgaatcag ctgataatct ttcatcctga cgcagccaac      1200
     gcagaattgc cgcgaattct agtggatcac cgacagaaaa cgatgcatgt cattgactct      1260
     tttgggtctg tggattctgg gtatcatata ttgaaggcaa acacagttaa tcagttgatc      1320
     caattcgcta gggagccact tgatagtgaa atgaagcact acattgtcgg c               1371
//