ID   GU797471; SV 1; linear; genomic RNA; STD; VRL; 1371 BP.
XX
AC   GU797471;
XX
DT   13-DEC-2010 (Rel. 107, Created)
DT   13-DEC-2010 (Rel. 107, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Merida-Tovar HC-Pro gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   "Sequence variability of Papaya ringspot virus based on the HC-Pro coding
RT   sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-1371
RA   Fermin G., Rojas Y., Tennant P., Fuchs M.;
RT   ;
RL   Submitted (15-FEB-2010) to the INSDC.
RL   Centro Jardin Botanico, Universidad de Los Andes, La Hechicera, Merida
RL   5101, Venezuela
XX
DR   MD5; 713ba4277c78320de36a3db30bbce7f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1371
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="Merida-Tovar"
FT                   /mol_type="genomic RNA"
FT                   /country="Venezuela"
FT                   /collection_date="2005"
FT                   /note="biotype: P"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>1371
FT                   /codon_start=1
FT                   /product="HC-Pro"
FT                   /note="helper component (aphid transmissibility) and
FT                   protease"
FT                   /db_xref="GOA:E5E227"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:E5E227"
FT                   /protein_id="ADR66824.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATII
FT                   LFPCHKITCNTCMNKVKGRVIDEVGEDLNCELERLRETLLSYGGSFGHVSTLLDQLNRV
FT                   LNARNKNDQAFKEIAKKIDAKKESPWTHMTVINNTLIKGSLATGYEFERASDNLLEIVR
FT                   WHLKRTESIKAGSVESFRNKRSGKAHFNPALTCDNQLDRNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEYYSQRQNPNGIRKIAIGNLVFSTNLERFRQQMVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKK
FT                   GYCYMNIFLAMLVNIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLIIFHPDAA
FT                   NAELPRILVDHRQKTMHVIDFFGSVDSGYHILKANTVNQLIQFAREPLDSEMKHYMVG"
XX
SQ   Sequence 1371 BP; 427 A; 254 C; 320 G; 370 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctcggt tttaataggg cttttctacg gcataggaaa        60
     ccaacggacc acacttgcac gtctgacatg gatgttacaa tgtgtggaga agtagcagct       120
     cttgcaacta taatcctgtt cccttgccac aagataactt gcaacacttg catgaacaaa       180
     gtaaagggaa gggttattga cgaagttggt gaggatttga attgtgagct tgaacgtttg       240
     cgtgaaacgc ttttgtcata tggagggtca ttcggacatg tctcaacatt acttgatcaa       300
     cttaacagag tcttgaatgc gagaaataag aacgatcaag cttttaaaga aatcgcgaag       360
     aagattgatg caaagaaaga gagtccttgg actcacatga cagtcatcaa caatacgctc       420
     atcaaaggtt cgctagcaac tggctacgaa tttgaaagag cgtctgataa tctcctggag       480
     attgtgagat ggcatctcaa aaggacagaa tcaataaaag ctggcagcgt tgaaagtttt       540
     agaaataagc gatctggaaa agctcacttc aacccagctc tcacgtgtga taatcagttg       600
     gacagaaatg gtaatttctt gtggggtgag aggcaatacc acgccaaaag attctttgcc       660
     aactattttg agaagattga tcatagtaag ggttatgagt actatagtca acgccaaaac       720
     ccaaatggta tcaggaaaat tgccattggc aatttggtgt tttcgacaaa tttggagaga       780
     tttcggcagc aaatggttga acaccacatt gatcaaggac caattactcg tgagtgcatc       840
     gcattgcgta ataataacta tgttcatgtt tgcagctgcg taaccctaga tgatggaact       900
     ccagcgacaa gtgagttgaa gactcctacc aagaatcata tcgttcttgg aaattctggt       960
     gatcctaagt acgttgacct accgactctt gagtctgatt cgatgtacat agccaagaag      1020
     ggttattgtt atatgaatat ctttttagcg atgcttgtaa acatacctga gaatgaggca      1080
     aaggatttca caaagagagt tcgtgacctt gtgggttcaa aacttggaga gtggccaacg      1140
     atgttagatg tcgcaacatg tgcgaatcag ctgataatct ttcatcctga cgcagccaac      1200
     gcagaattgc cgcgaattct agtggatcac cgacagaaaa cgatgcatgt cattgacttt      1260
     tttggttctg tagattctgg gtatcatata ttgaaggcaa acacagttaa tcagttgatt      1320
     caattcgcta gggagccact cgatagtgaa atgaagcact acatggtcgg c               1371
//