ID GU735408; SV 1; linear; viral cRNA; STD; VRL; 8916 BP. XX AC GU735408; XX DT 03-FEB-2011 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Watermelon bud necrosis virus strain JT L protein gene, complete cds. XX KW . XX OS Watermelon bud necrosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-8916 RX DOI; 10.1007/s00705-010-0881-z. RX PUBMED; 21184244. RA Li J.T., Yeh Y.C., Yeh S.D., Raja J.A., Rajagopalan P.A., Liu L.Y., RA Chen T.C.; RT "Complete genomic sequence of watermelon bud necrosis virus"; RL Arch. Virol. 156(2):359-362(2011). XX RN [2] RP 1-8916 RA Chen T.-C., Li J.-T., Yeh Y.-C.; RT ; RL Submitted (11-FEB-2010) to the INSDC. RL Biotechnology, Asia University, 500, Lioufeng Rd., Wufeng, Taichung 41354, RL Taiwan XX DR MD5; 064a4e02d8d9687810c7cd894f865b05. DR EuropePMC; PMC4818514; 27038777. XX FH Key Location/Qualifiers FH FT source 1..8916 FT /organism="Watermelon bud necrosis virus" FT /host="Citrullus lanatus (watermelon)" FT /strain="JT" FT /mol_type="viral cRNA" FT /country="India" FT /collection_date="30-May-2008" FT /note="serogroup: WSMoV" FT /db_xref="taxon:76052" FT CDS 33..8669 FT /codon_start=1 FT /product="L protein" FT /note="RNA-dependent RNA polymerase" FT /db_xref="GOA:E9KLD6" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015841" FT /db_xref="UniProtKB/TrEMBL:E9KLD6" FT /protein_id="ADW23570.1" FT /translation="MNIQTINSFLDASGETTAYLQRIKDEIMLMSNVIEQGYSEGKGVI FT ESGLSSIMSMNYILDKIEDMKSKYHQSSSSIDQREMETEIYLFLDKYKELELMRHDLFG FT VLAGRRLHFVPKHRSDVFMKDCLMSYIEFCSASVSISNKIDNLDSLKEKLIFQHLTPDN FT YTIYKETKGEKACLMIYDWKVSVDAVSEGKTSENYYTSVWKTFKDITIDEEPFLERHPI FT FITIVVLNPSGNMPIVATTCRVVQEFRNSPYKTFNDRKRAAEAAKLISVNSLGQLIGLG FT ADCFRRFYSETQSFKNSLLSKVGKYMNRSSEVFFSHWSCEYRKTNLSNNQISQDIIDLI FT NSLPNDVVGKEILVHFLFGNYLYFKETMSELHLKDRFEGYRSHCKMMRIRPLENEEKLK FT DYLDRNEHIFESLYETHLKKIKSDVLLRKSKEIEIESIERAFNINAEEYQKEYPGCFTN FT DLQETKTNFSICWSPMTEELKMNDLNYNNAIIQSFRDALSEQPKLIHHKSYGGAKVDTY FT FSTTLFNLVRACLVDLSTDTTGHSKATLEDVVDIKDGSIQVKRTEASQRWREIGNVKTR FT NGNEFTLSPQADTEARKNFFRGLNLMYVDMGKKKKIDIKNELKSKIQESMAQQKNENMD FT GPSGEYDVSKANIPHQTSLKGITHNKKLIRHDNPDVKYHCESMIESMYVLHGMDERKDK FT NSKINSVYNEYCSNPSSLFTKGNLIETEMTIAKNIHEVAKELSIYTYSEDMMQMAKGLM FT VADRFMKKTDFKILTCANTSMICLAFKGDGINTGKSGVPYITIHKVDKSIQPHFVSLYT FT KELIVSFKSENYFINIMRPQRLNQVRLLSLFKAPSKVPILFSQYSLLSTEIKKWLNQQS FT IDVFTCPENKIQYLQKILFSSVIIGTVTKLSRMGIFDFMRYARFLPLSDYSNIKEYIAE FT KFDPDITNVIDCFFVSGIKNLLLKMEGINLSNSIKPLTIDQENDMSGGISDLDIICPIT FT GSTLKTIECLYNNVYLAIYMMPKSLHTHVHNLTTLLSVPAEWEIKFREKMGFMIGDEIK FT PKKEMFNDSGPFSINGVLNVKTLFDYYKKNITNVGACRSNIEEKEDFLSAPYKIKTLTS FT SKKCSKADIIKSTEIVAALKSSYGKQPDDIKGSDLYILKGVLKCFDEDRDSLTNFLEVE FT GLEESKYLHFFTNMMSGDNKILMKTNQDKFYYKSHPLTVETFMKVRYGYFKTTTVLKSK FT KVSEELYDLIKEFNKITEVDLEALEKLGRGLKGNRVTFIQLLEFILMKSRTNAGNTDFL FT VSIFEKMQRTKMDREIYLMSMKTKMMLYFIEHTYKHVAQSDPSEAISISGDYKIKNLAS FT LSYDTITNYNTALQKNLECKMAFLSADQSKWSASDLTYKYILAVIMNPLLTTGEINLMC FT ECIMMYVKLKRVCIPTDIFLNLKRGQTEYGSYGTALSVLTDNLETNTFPVSMNWLQGNL FT NYLSSVYHSCAMMGYEKAMKKMGNYDFTIRWMVHSDDNATSMVVRGDIKELLAEFNCTS FT LSELLFRSIQSHFKSYCITLNPKKSYASESEVEFISERIINGAVIPLYCRHLANCSTES FT SHNSYFGDLMSLSIHITMLLRKGCPNELIPFAYAAIQIQFLSIYSMLPGEENDISTIVK FT EIDFPLSKREIPICAGGWMYAPIELLSILGPSSNDQLIYYKIILDFFNLKDFSSLKKSV FT NSLGYIDLRINELFKRIKYQKITNADKKMICMVNLFKTSLMSEDCDSLNVGMKFQSMIT FT QIIKLPSFVSEGSLLKNSSFQDFCKLFPNLKKNTDILNALKPVNLDERSLEELNESKFL FT SQIQLEELSRHMASHPESFLIAPMNDKDYILTNLYTYSSVSKRNQMLNQSTEKLALDRI FT LRSKAKTFLDPNSKEMVSYKENMSMKMREIMSYAGNDFKIINTISSLMVRDMNFEMVVS FT LMENTVANASIPKANYNFRWFITEKVPSVIEGSPGLIVMSAVYGMDYLIELGLKKLPLT FT ETSISILHDIFGNRKTFDDVKECIQNVKKQYKTEEFQNADVLKRYVLSINYMIQSQNKL FT LSINTCFSRKNFPFYSKYNLGKTFITNTLAIWSTIYSRLTNINFYTNLNFVIDRSSRLI FT ISLQRDMNLEKLIDCCAYVSDRLQSLFPDMTVESIRQVLCRLNFNGVDLMKKMKSEIAE FT VKRAINNIKTSTHVTLSFRPQMIAMSKHAAWLYNFGYINEKEFKFVIDQIRQSEVHYIK FT TDEQDVRGYYVSGHTYKIGIKTQHNYGQLAMSNQDVSIHLHSPYEYKREDDGKIWDVHV FT RSVYKLLQKLLMDKQSVIKAFLNIRTELMPNQFCIHESSNKTLLILINDTTRPISLERI FT KFKGDIKYIPSSDFAWDMMSNQSKYRLRQAETGECYTELYKLIDNNDNLMNTILTNLKK FT SLEYGNEMENLIEQSIQGIDDADTIEYIQESVDQIHKLAIEGLETCQTSDEFENYLKRV FT DFQSTVDFHKDLLEQIVEEKYGSAERLDVAVEKLTKWTNSLSTFKDVCTMLKFSMVNDS FT KGIKTYKANGADFHSLSASEVMTSQGFDLFELLKLIKACEACHTSNSVLNLIAFKNIKN FT KTFIPGFKRHLPNTVHFDYEMKLNNEVMNKFYEYKTISLQDIKVSDRVKRVLETNGFSI FT TGHNLKLEETNLELNPVEIIDDSSTYDQVAKQMRLTKKKSSYLIPANTLLLGELMKFLM FT LCIKGEEHDIMKLLRSHFAMQPVRENRLLCIQDAVMTCRISGYIQRHFLNDKKEIVLLG FT VADSLENFISLATPNYATQEPFKAEALIKKALAEVYDSGKYKILKNIRNYIVDDVEFLT FT EKCLYSNITNEEISNMIFNAVSKIDLELSNLKPKKRKKRLDLHDVFNGFLGSDATTSEQ FT Q" XX SQ Sequence 8916 BP; 3298 A; 1399 C; 1642 G; 2577 T; 0 other; agagcaatcg tgcaacaata agaatatcag taatgaacat tcaaactata aacagttttc 60 tagatgcttc aggcgaaacc actgcatatc tgcagagaat aaaagatgaa atcatgttaa 120 tgtcaaatgt tatagaacaa ggttattctg aaggtaaagg tgtaattgaa tctggattga 180 gttctataat gtctatgaat tatattctag acaagattga agacatgaaa tcaaaatacc 240 atcagagctc ctcttctatt gatcaaagag aaatggaaac agaaatctat ttatttctcg 300 ataaatataa agaactagag ttgatgaggc atgatctctt tggtgttctt gctggaagaa 360 gattacattt tgttccaaaa cacagatctg atgtttttat gaaagattgt cttatgtctt 420 atatagagtt ctgcagtgct tcagtgtcca tttcgaacaa aatagacaac cttgatagtc 480 taaaagaaaa attgatcttc cagcacctaa caccagacaa ttacacaata tacaaagaaa 540 ccaaaggtga gaaagcatgt ttgatgatat atgattggaa agtgtctgta gatgctgtgt 600 ctgaaggcaa gacgtcagaa aactattaca caagtgtttg gaaaactttt aaagatatca 660 ctatagacga agaacctttt ttagagagac acccaatatt cataaccatt gttgtgttga 720 atcctagcgg taatatgcca attgtggcaa caacttgccg ggtcgtccag gagttcagga 780 actcaccata taaaaccttc aatgaccgca aacgagctgc tgaagcagca aagctaatat 840 cagttaattc tctaggtcag cttataggtc tgggtgctga ctgttttagg cggttttact 900 cagaaacaca atcgtttaag aactctctct tatctaaggt tggcaagtat atgaacaggt 960 catcggaggt tttctttagc cactggtcat gtgaatacag gaaaactaat ttatcaaaca 1020 atcaaattag tcaagatatt attgatttga tcaattcctt gcctaacgat gtggtgggga 1080 aggagatcct tgttcatttt ctttttggga attatttata cttcaaagag actatgagtg 1140 aacttcatct caaagataga tttgaggggt acagatcaca ctgcaaaatg atgagaattc 1200 gtcctttgga aaatgaagaa aaacttaaag actatcttga tagaaatgag catatttttg 1260 agagtttgta tgaaacacat ctcaaaaaga taaaatcaga tgtgctactc agaaaatcta 1320 aagaaataga gatagaaagc atagagcgag ctttcaacat taatgcagag gagtaccaaa 1380 aagagtatcc tggatgtttc acaaatgatc ttcaagaaac taaaacaaac ttttcaatct 1440 gctggtcacc aatgacagaa gaactaaaga tgaatgatct taattataat aatgcaataa 1500 tacaatcttt cagagatgct ttgagtgaac agccaaagct tattcaccat aaatcatatg 1560 gtggggctaa agtagacact tatttttcca caactctttt taatttagtt agagcttgtc 1620 tagtagatct aagtacagat acaacgggac attcaaaggc taccttagaa gacgtagtgg 1680 atattaaaga tggcagcatc caggtaaaaa gaactgaagc ctcacagaga tggagagaaa 1740 tagggaatgt caagactaga aatgggaatg agttcacgtt atcaccgcaa gcagacactg 1800 aagcaagaaa gaattttttc agaggtttaa acttgatgta tgttgacatg gggaagaaaa 1860 agaagataga tataaagaat gaattaaaaa gcaagatcca ggagtcaatg gctcagcaaa 1920 agaatgaaaa catggatggc ccgagcgggg agtatgatgt gtcaaaagcc aatatacctc 1980 accaaacgag cctcaaaggg atcacacata acaaaaagct aatcagacat gataacccag 2040 atgttaaata tcattgtgag tcaatgattg aatctatgta cgtccttcat ggtatggacg 2100 aaagaaaaga taaaaatagt aaaataaatt ctgtctacaa tgaatattgc tcaaatcctt 2160 cttcactatt tactaaaggc aatttgatag aaactgaaat gacaattgca aagaatatcc 2220 atgaagtagc taaggaactt tcaatttaca catatagtga agacatgatg cagatggcaa 2280 aaggtttgat ggtggctgac aggtttatga agaaaacaga cttcaagatc ttaacttgtg 2340 ccaatacaag catgatatgc ctagcattca aaggtgacgg cataaacaca gggaagtcag 2400 gtgtgcctta catcaccata cacaaggtag acaagagcat ccaaccacac tttgtttctt 2460 tatacacaaa agaactaata gtgtctttta aatcagagaa ttattttatt aatatcatga 2520 ggccacaaag gctaaatcag gtgcgacttc tcagcctgtt caaagctcct agtaaagtcc 2580 ctatcctctt ttcacaatat tccttattga gtacagagat aaaaaaatgg ttgaatcagc 2640 aatccataga tgttttcact tgccctgaaa ataagatcca gtatctgcaa aagatattat 2700 tctcctctgt gatcattggc actgtgacca aactcagcag aatgggaatt tttgatttca 2760 tgaggtatgc acggtttcta ccactgtctg attattccaa tataaaggaa tatatagctg 2820 agaagtttga cccagatata acaaatgtta ttgattgttt ttttgtttct ggaattaaga 2880 atcttcttct gaaaatggaa ggtataaatt taagtaatag tataaaacct ctgactatag 2940 atcaagaaaa tgatatgtct ggaggtatat cagatttaga catcatatgc cctatcacag 3000 gatctacact aaagactata gagtgtctgt ataacaatgt ctatcttgca atttacatga 3060 tgccgaaatc tctccacact catgtacaca atctcacaac acttctgagt gtcccggctg 3120 aatgggaaat taagtttaga gaaaaaatgg gctttatgat aggagatgaa attaaaccaa 3180 agaaagaaat gttcaatgat tctggtccat tctcaattaa tggagtgctc aatgtgaaaa 3240 ctttgtttga ttattacaag aaaaatatta caaatgttgg tgcttgtaga tcaaatatag 3300 aagaaaaaga ggattttttg tctgctccat ataaaataaa aactttaaca tcatctaaaa 3360 aatgctcaaa ggcagatatc ataaaaagta cagagatagt tgctgcttta aaatcatcat 3420 atggaaaaca gccagatgat ataaagggtt cagaccttta tatactgaag ggagttctga 3480 agtgttttga tgaagataga gattcattaa ccaacttctt ggaggtagaa ggcttagaag 3540 agtcaaaata tttacatttt tttaccaaca tgatgtcagg tgataataaa atattgatga 3600 aaactaacca agacaaattt tattataaaa gtcatccttt gacagtggag acatttatga 3660 aagttaggta tggttatttc aagacaacca ctgttttaaa atcaaaaaaa gtaagtgagg 3720 aattgtatga tttaatcaaa gagttcaaca agataacaga ggttgacctg gaagctttgg 3780 aaaagctagg tcgtggacta aaaggcaatc gagtcacatt tatacaatta ttggaattta 3840 ttttgatgaa atccagaacc aatgctggga acacagattt cttggtatca atatttgaaa 3900 agatgcagag aacaaagatg gatagagaga tttatcttat gagcatgaaa acaaaaatga 3960 tgttgtattt tatagagcat acatacaagc atgtggctca atctgatcct tctgaagcca 4020 tctcgatctc tggagactac aaaattaaaa atttggcatc tttatcatat gatactataa 4080 ctaattacaa cacagctctt cagaaaaatc ttgaatgcaa aatggctttt ttatctgcag 4140 atcaatcaaa atggtctgca tcagatctaa cctataaata catcttggct gttattatga 4200 atcctctttt aaccacagga gaaataaacc tgatgtgtga gtgcataatg atgtatgtaa 4260 agttgaagag agtttgtatt cctaccgaca tctttctaaa cctaaaaaga gggcaaactg 4320 aatatggatc ttatggaact gcactgtctg ttttaacaga taacttagaa acaaatacat 4380 ttcctgtatc catgaactgg ctccaaggga atttgaatta tctttcgtca gtgtaccact 4440 cttgtgcaat gatgggctat gaaaaagcta tgaaaaagat gggaaactat gatttcacta 4500 taagatggat ggtgcattca gatgataatg ctacttctat ggtggttaga ggggatataa 4560 aagaacttct tgccgagttt aattgcacca gtctgtcaga actgcttttc cggagtatac 4620 aatcacattt taaaagttat tgcataacat taaatccaaa aaagagctat gcctcagaat 4680 cagaggtaga atttatatct gaacgaataa ttaatggtgc tgtcataccc ttgtattgta 4740 gacacttagc taattgtagc acggaaagtt cccataatag ctattttggt gatctgatgt 4800 cactttctat acatataaca atgctcttaa gaaaaggatg tcctaatgag ctgataccat 4860 ttgcttatgc tgcaatacaa atccaatttc tcagcattta ctcaatgctt cctggggaag 4920 aaaatgatat atcaactatt gtcaaagaaa ttgattttcc cttatcaaaa agagaaatcc 4980 cgatatgtgc tggtggttgg atgtatgcac ctatagaatt attgtctatc ttaggtcctt 5040 catcaaacga tcaattgatt tactacaaaa tcatcctaga tttttttaac ctaaaagatt 5100 ttagtagtct taagaaaagc gtcaactctt taggctacat tgatttaaga atcaatgaat 5160 tgttcaaaag aataaaatat caaaaaataa caaatgcgga taaaaaaatg atatgcatgg 5220 ttaacttatt taaaacaagt ttgatgtctg aagactgtga cagtttaaat gtaggaatga 5280 agttccaatc catgatcaca caaattataa aactacctag ttttgttagt gaaggctcac 5340 tgttgaagaa ctcaagtttc caagacttct gtaagctatt ccccaatttg aagaaaaaca 5400 ctgacatact caacgcatta aaacctgtta acttggatga aagaagcctt gaagagttaa 5460 atgagagcaa atttttatca caaatccagc tagaagagtt gagtaggcac atggcatctc 5520 atccagaatc gtttttgata gcaccaatga atgacaaaga ttacattttg accaatctct 5580 atacgtatag cagtgtaagc aaaaggaatc aaatgttaaa tcaatcaact gagaaattgg 5640 cattggatag aattttaagg tctaaagcta aaaccttctt agatcccaat tcaaaagaga 5700 tggtttcata taaagaaaat atgtctatga aaatgagaga gataatgagc tatgctggga 5760 atgacttcaa aattattaat actatatcca gccttatggt gagagacatg aattttgaaa 5820 tggtcgtctc tttaatggag aacactgttg ctaatgcttc tattcctaaa gcgaattata 5880 attttagatg gttcataact gaaaaagtac caagtgtcat tgagggatcc cccggtttaa 5940 ttgttatgtc agctgtttat ggcatggatt atttgataga gctaggactc aaaaaactcc 6000 ctttgacaga aacctctatc tctatactgc atgacatctt tggtaacaga aaaacatttg 6060 atgatgttaa agagtgtata cagaatgtta aaaagcaata caagacagaa gaatttcaaa 6120 atgcagatgt tctaaagaga tatgtattaa gtataaatta catgatccag tcccaaaaca 6180 agcttctgtc tatcaacaca tgtttctcca ggaagaattt ccctttctat tcaaaatata 6240 atctaggtaa gacgttcata accaatactt tagctatatg gagcactata tacagccgat 6300 tgacaaatat aaacttttac accaatctga attttgtaat tgacaggagt tctaggttga 6360 ttatctcatt gcaaagagac atgaatctag aaaaactaat tgattgctgt gcctatgttt 6420 ctgacagatt gcaaagctta tttcccgata tgaccgtaga gtctatccgg caagttttgt 6480 gcaggctaaa ttttaatggg gtagatctta tgaagaaaat gaaatctgaa atagctgagg 6540 taaaaagagc cataaacaac ataaagacat ccactcatgt aactctctca ttcaggccac 6600 aaatgatagc aatgagcaaa catgcagcat ggttatacaa ttttggatat attaatgaga 6660 aagagttcaa atttgtcata gatcagatca gacaaagcga agtccattat attaaaacag 6720 atgagcaaga tgtcagaggt tactatgttt caggtcatac atacaaaata gggatcaaaa 6780 cccagcataa ctatggacag cttgctatgt caaaccaaga tgtgtcaatc catctccact 6840 caccgtatga atacaagaga gaagatgatg ggaaaatatg ggatgttcat gttagatctg 6900 tatataaatt gcttcaaaag ctcttaatgg acaagcaaag tgtaattaaa gcatttttaa 6960 atattagaac agaactaatg cccaatcaat tttgtattca tgagagttca aataaaactc 7020 tattgatatt gatcaatgat acaacccgac caatctcatt agagagaatc aaattcaaag 7080 gtgatataaa atacattccc tcctctgact ttgcctggga catgatgagc aatcagtcta 7140 aatacagatt gcgacaagca gaaacaggag aatgttacac agaattatac aaactaatag 7200 acaacaatga taatttgatg aacactattt taacaaattt aaagaaaagc ttagaatatg 7260 ggaatgaaat ggagaacctt atagagcaat caatccaagg gatagatgat gcagatacta 7320 ttgaatatat ccaagagtct gttgaccaaa tccacaaatt agccatagaa ggtttagaaa 7380 catgtcagac atcagatgaa tttgaaaact acctaaaaag agttgatttt caatctacag 7440 ttgatttcca taaagatctt ttagagcaga ttgttgagga aaaatatggt tcagcagaaa 7500 gactagatgt tgctgtagag aagctaacca aatggacaaa cagtttatca acatttaaag 7560 atgtgtgcac aatgttaaag ttctccatgg tcaatgattc taagggaatt aaaacatata 7620 aagctaatgg agctgatttc cactcattat cagcaagtga agtcatgact tcacaaggat 7680 ttgatttgtt cgaattactg aagttaataa aggcctgtga agcttgccac accagcaatt 7740 cagtattgaa cttaattgct tttaaaaata tcaaaaacaa aaccttcatc ccagggttta 7800 agagacactt gcccaataca gttcattttg actatgaaat gaaactaaat aatgaagtga 7860 tgaacaaatt ctatgagtat aaaacaatct cactacaaga tataaaagtt tctgatagag 7920 taaagagggt ccttgaaaca aatgggttca gtatcacagg ccacaatttg aagttagaag 7980 aaacaaactt agaattgaac cccgtggaga ttatagatga ctcttccact tatgatcagg 8040 ttgccaagca aatgaggtta acaaagaaaa agagctcata tcttatacct gctaacactc 8100 tattgttagg agaactaatg aagttcttga tgctgtgcat caaaggagaa gaacatgata 8160 taatgaaact tttgagaagt cattttgcaa tgcagcctgt aagagaaaat agattgcttt 8220 gtatccaaga tgctgttatg acatgcagga taagtggtta tatccaaaga cactttctca 8280 atgacaagaa agaaatcgta ctgttaggtg tagctgacag cttagagaac ttcatttcct 8340 tagcaactcc aaactatgca acacaggagc catttaaagc agaggctttg ataaaaaaag 8400 ccctggcaga agtgtatgat tccggtaaat ataagatact aaaaaatata agaaattata 8460 tagttgatga tgtagaattt cttacagaaa agtgtttata ttcaaacata actaatgagg 8520 agataagcaa catgatattt aatgcagtta gcaaaattga tctggaatta tccaatttaa 8580 agccaaagaa gagaaagaaa agactagact tacatgacgt tttcaatgga ttcttgggat 8640 cagatgctac tacttcggaa caacaataaa aaggaggtaa tctatgggcg ggaggaaagg 8700 aataagccat agaatagaca gtatagaacc agaagcagta aaagagcatg acaacaaaag 8760 ggttttttct tttgcaaaag gatgaaagta ttctaaatca gtttaaaatg caatgtagtt 8820 gtagtatcta gaatcaacag tagagtcaga aatagtattt cttaataaaa ttgagactga 8880 gtgtagaata cttttgtttt gttgctcgat tgctct 8916 //