ID GU733707; SV 1; linear; genomic RNA; STD; VRL; 7599 BP. XX AC GU733707; XX DT 21-APR-2010 (Rel. 104, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Grapevine virus B isolate GVB-H1, complete genome. XX KW . XX OS Grapevine virus B OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus. XX RN [1] RP 1-7599 RX DOI; 10.1007/s11262-010-0511-6. RX PUBMED; 20628801. RA Goszczynski D.E.; RT "Divergent molecular variants of Grapevine virus B (GVB) from corky bark RT (CB)-affected and CB-negative LN33 hybrid grapevines"; RL Virus Genes 41(2):273-281(2010). XX RN [2] RP 1-7599 RA Goszczynski D.E.; RT ; RL Submitted (11-FEB-2010) to the INSDC. RL Virology, Plant Protection Research Institute, Pretoria, South Africa XX DR MD5; e2907d1ef2bdab7bd5d10b16621947b9. DR EuropePMC; PMC4661162; 26640751. XX FH Key Location/Qualifiers FH FT source 1..7599 FT /organism="Grapevine virus B" FT /host="grape" FT /isolate="GVB-H1" FT /mol_type="genomic RNA" FT /country="South Africa" FT /isolation_source="grapevine" FT /collected_by="D.E. Goszczynski" FT /collection_date="1999" FT /db_xref="taxon:35289" FT 5'UTR 1..48 FT CDS 49..5178 FT /codon_start=1 FT /product="replicase" FT /note="ORF1" FT /db_xref="GOA:D5L1L9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR027450" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:D5L1L9" FT /protein_id="ADE62745.1" FT /translation="MSISVSSQRVASAALYQNGSTDQIEEIKKIKSSRLLSSEKHSDGL FT FDYYVPDFLRDYFARKGVHTSVHSFQAHPHPCSKMIENHILYNIVSQYVDDSTLFVSCK FT ESKLRTLFMKKTNKSLSTVTQYNRLVHAKDVLRYTDPVRELDMDHLTKLSELAKRAKTA FT FIHDEVHYWSLKDFQSFLGHLGGTQRLLYSIIYPAELHIGCEQSLFPEAYEFDLLGEYI FT TWYPDGKADGSYKQPVNPWLLTTSKTVDVHGQTWTLTKVLTMGAHHLFLATRGSSITEE FT EYHYDDFTVILPKKLLQGRRRNKMPYLRSRFITSVLFYLLALKKPDPSSAVAKLRQLTN FT GEESTAEALFVAQLSRQIQETKLYDKMGNFSLKECIWSAVSAAMGDSLVYFFDKARFYN FT ESLESFILNCGPAKIEVKRVFREAVYRNHGVCPHLASFDGAHDCIIDELYLQNIRDQDR FT AREPYSIPRDEVIGNRNSCRISLIEMGRVMHNFYQEMKVEINREVIVSPLDDFRALREP FT LTGRNGVIGMTCLLLTWEADPLKRFSMGLIDAKELNSALFGGELPPTKRAPMKEVERNV FT FNCTCGVALPRSRLKDTVDVPINEFTDALKGRKAAFYSRHSLGYNYNGGSHTSKGWPDW FT VNKVAMELGLGEDYDHCLAQVYEENKGINYHADDEPCYTDPEVVTVNLKGAANFYLKCS FT TECSLTLEDGDVLVMPKGFQNTHKHAVTSLTSGRVSLTFRNGINEPDEGSDKMSEYEEN FT SPELEESLDALEKNRKSLCALQILADHMRVDLAICTSMVFAKDPRAIEEVKRGGMTLGT FT FICVLKSLNLAAYIESERGCLVVNGTYKELSCYAEDDHISEWSGPRKETSFANALSMNP FT DIRVVKYEVCEQRAKKLASSFQEGFTGVCLNKFQKQKSSFNLVNGSELIDVHLTLGFAG FT SGKSFYPQCVLKNSSYSNALVIVPRKALCSDWINKVHPDVKVVTFESAFRQQKKGYGLI FT VIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQCEYHSKSDHFFLGQEESIFKRFKGHC FT NYLYKSHRLPKNQRLFEIECDGAEGDGLTFNKARGKDLTLCASQRRKESEKNVSTVGES FT QGLSANRVNILLDKDWSLVNEETVIVAFTRARKEINVIGNSRLISNLKRSAKSTILRKI FT LGGERVPESLILNLIRRKLPECDLVKKEMLLGASDDMEEKLGGDPYLKGLLCLIDEIEE FT EEVEIPEPELLEPQRTHLPLSVGENELCVSDLRAKEYREASTEAGRTDQIDEFGYKGEP FT ENPMNHKALYLYHQNSDVATFFLSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQVY FT NLKQPDHLPSLERAEQEFMKKRIAKSSKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKME FT KRKVDAKAGQTIACFCHAVLCRFGPLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKN FT FVRTLDGTDSDYGAFDRSQDEKILDFEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLA FT VMRFSGEFGTFFFNTICNMGFTCLKYSIRSDTPICYAGDDMYAPGVLVTKSEFKHILEE FT LQLKAKVNYTRSPLFCGWRMSPYGIVKDPNLLLDRWKIAERDGSLKNCMVNYALEAIYG FT YRLGEHLFDLNIDIDAQQDLIRRIVLIKHQLPKSLQRFYSDEERECYSDGEEFNLKVRN FT EGGLDESEFTED" FT CDS 5153..5692 FT /codon_start=1 FT /product="unknown" FT /note="ORF2" FT /db_xref="UniProtKB/TrEMBL:D5L1M0" FT /protein_id="ADE62746.1" FT /translation="MSRSSQRIESEGLRQFLRQVEGFSLDVNLLGEEYSKLGVFEAQQY FT RILSLLCRINKVSVSFIVSCLIKRECAVEDYREGTICLRLEEVIERLVSGSLPSVFTIR FT KDFEKGSVAFNYPWYYSVTREPGSRAQYNYRNYVPGFKERVATLPWVALGFKASAANNP FT ANPGTHSYTIECVRQA" FT CDS 5562..6527 FT /codon_start=1 FT /product="movement protein" FT /note="ORF3" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:D5L1M1" FT /protein_id="ADE62747.1" FT /translation="MSQVSRSESQRYPGWLSASKQVQQTTRQTPEPTHTQLSVFDKPKE FT ELGVRGVKSAITKAKVYDLSYFEKLFPTRVFKSVVHEEIRIRDGEVKQVINLMDDNFVK FT KIETTSYPYLHMGCLAICVIPHGRDLKGDVEFTLRDTRFLPNSEPLMSFGCKAEKMLSA FT FSAFPGYFVSTYDLIDGFTMELEVKARGMEFEEGVRPMSIQIICVAKLCTQDFHHQYAL FT QKVKKGAYQALLNSYLVQVEDQTEHLEIQNPGKSLNRIGYTGVHVKSGESESIDKLLVP FT PEVYETISKQFPDSNGKYIPDGQDKGEYLRASVRGGHVRH" FT CDS 6448..7041 FT /codon_start=1 FT /product="capsid protein" FT /note="ORF4" FT /db_xref="GOA:D5L1M2" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:D5L1M2" FT /protein_id="ADE62748.1" FT /translation="MENISRMAKIRANISELLCAGVTFVTDARETGFDRSMYFRTLFGY FT IALTGTSAKAQHYENVDIIGDKVGAEGLDSRGTVNISEQVKKMMGYSRAVPSGVCKGLT FT LRQMCEPFAEEARECLTILATLRVYSRLALKMTKLGQKEPQVMFDFNSGLNLLTLSATE FT AAAIQSLNSRLFRTEGAKNVFTAQASVGEQSVEI" FT CDS 7083..7457 FT /codon_start=1 FT /product="RNA binding protein" FT /note="ORF5" FT /db_xref="InterPro:IPR008891" FT /db_xref="UniProtKB/TrEMBL:D5L1M3" FT /protein_id="ADE62749.1" FT /translation="MSKYMGESRSAAKRRATRYGRCYCCGRLECNGGRRTTISQDEVKA FT CIRTPAIRFLTENGGRYVTNAISLALSDMDRVGKSEYQSLFKVNSAPIGMRSPEETPEF FT YNWGADFNAGSSVFADRPYE" FT 3'UTR 7458..7599 XX SQ Sequence 7599 BP; 2269 A; 1474 C; 1983 G; 1873 T; 0 other; taataaagtt cgctttttct ttaatcttcc gtaacgttac caacagtaat gtcaatatcc 60 gtctcgtcac agcgtgttgc aagcgcagcc ctgtaccaga atgggtctac ggaccagatt 120 gaagaaataa aaaaaattaa aagctcccgg ctattaagct cggagaaaca tagtgatgga 180 ttgtttgatt actatgtacc agatttctta cgagattatt tcgctaggaa aggggtacat 240 acgagtgtgc actcatttca agcacatccg cacccatgtt ctaaaatgat tgaaaatcac 300 attctttata atatagttag tcagtatgtg gatgattcaa cactttttgt aagttgtaaa 360 gagtccaagc tcaggacgtt atttatgaag aagaccaata aatccctgag cacagttact 420 caatacaata gattagttca tgctaaagat gtgttgagat acactgatcc agtaagagag 480 ttagatatgg accatctaac caaattatct gaactggcaa aaagagcaaa aacagccttt 540 attcatgatg aggtccacta ttggagcttg aaggattttc aaagcttctt aggccacctg 600 gggggaacac aacgcctgtt gtacagcata atctacccag cagagcttca catcggttgc 660 gaacagagcc tattccctga ggcttatgag tttgatctgc tcggtgagta cataacgtgg 720 taccctgatg gtaaagcaga cggatcttac aagcagccag tgaacccgtg gttacttacc 780 acctctaaaa cggtggatgt gcatggccag acatggaccc taactaaggt gcttaccatg 840 ggtgcacatc acctgttttt ggccacaaga ggtagttcga tcacagaaga ggaatatcat 900 tacgatgatt tcacagtgat cctaccaaag aaattgctgc aaggtcggag gaggaataaa 960 atgccttact tgaggagcag attcataacg agcgtgctat tctacttgct agctctcaag 1020 aaacccgatc ccagctcagc ggtggccaaa ttgaggcaac taaccaacgg tgaggaaagc 1080 accgctgaag cattattcgt ggcccaatta tccagacaaa ttcaagagac aaaactctat 1140 gataaaatgg gtaatttctc gctcaaagag tgtatctgga gcgcagtgtc agcggctatg 1200 ggggattcct tggtctactt ctttgacaag gccagattct acaacgaatc ccttgaaagc 1260 ttcattctga attgcgggcc agcaaaaata gaagtcaaaa gggttttcag agaggcagtg 1320 tacagaaacc atggagtatg cccgcaccta gcaagctttg atggtgccca tgattgtatc 1380 atagatgagc tttacctcca gaacatcaga gatcaggata gagcacgtga gccttactct 1440 atccctcggg atgaagtgat aggtaaccgc aacagttgca ggatctcatt gatagagatg 1500 ggcagagtga tgcacaattt ctaccaagaa atgaaggtag agataaacag agaggtgatc 1560 gtaagccctc ttgatgattt cagagcgctc cgggagcctc tgactggacg taatggtgta 1620 attggtatga cctgcctatt gctgacttgg gaagcggatc cattaaaaag attctcaatg 1680 ggcttgatag atgcaaaaga gctcaactca gctctcttcg gcggtgaact accacctaca 1740 aaaagggctc caatgaaaga ggtggaacgc aatgttttca actgcacatg tggggttgct 1800 ttgcccagat caagattgaa ggataccgtt gacgtgccca tcaatgagtt tacagatgct 1860 ctgaaaggga gaaaggccgc tttctacagt aggcattctc tagggtacaa ctacaatgga 1920 ggcagccata ctagcaaggg ttggcctgac tgggtgaaca aggttgccat ggaactaggg 1980 ttgggagagg attatgacca ctgcctggca caagtctatg aagagaataa gggtataaac 2040 tatcatgctg atgatgaacc ctgctataca gacccggagg ttgtgactgt aaatctgaag 2100 ggtgctgcca acttctacct gaaatgcagt accgaatgct ccttgaccct cgaggacgga 2160 gatgtgcttg tgatgccaaa agggttccaa aatacccaca aacatgctgt gacaagtctg 2220 accagcggta gggtgagctt gaccttcaga aacgggataa atgaaccgga tgagggaagt 2280 gataaaatga gtgagtacga ggagaactca cctgaattgg aagagagttt agatgctctg 2340 gagaaaaatc ggaagagctt gtgtgcattg caaatactag ccgatcacat gagggtggat 2400 ttagcaatat gcactagcat ggtgttcgcc aaagacccca gagctataga agaagtgaaa 2460 agaggaggaa tgactctagg caccttcatc tgtgttctca agagcctgaa cctcgctgct 2520 tacatagaat ccgaaagagg gtgtctggtg gtgaatggga cgtacaaaga gcttagttgc 2580 tatgcagaag acgatcatat atctgaatgg tctggcccca gaaaggaaac ctcgtttgca 2640 aacgctctct ctatgaaccc agacatcaga gtggtcaagt acgaggtgtg tgaacaaagg 2700 gcaaagaagc tcgcaagcag tttccaggaa ggattcactg gggtctgctt gaataagttc 2760 caaaaacaga agagctcctt taatctggtg aatgggagcg agttgataga tgttcaccta 2820 accctcggtt tcgcagggtc cgggaagagt ttctacccac agtgcgtgct caagaacagc 2880 agctattcaa acgcattggt catagtccca aggaaggccc tctgcagcga ttggatcaac 2940 aaggttcatc cggatgtgaa agtggtaacc tttgaaagtg cgttcaggca acaaaagaaa 3000 gggtatgggc tcatcgtcat tgacgaaata ggtctgctac cacctggcta tatagacatg 3060 gtacatgggt acttctgcta tgacagtctg ttggtattgg gcgacccctt gcaatgcgag 3120 taccacagca agtctgacca cttctttctt ggtcaagagg agagcatctt taagagattc 3180 aaaggtcact gcaattatct atacaagagc cacaggctcc cgaagaatca aaggctcttt 3240 gagatagaat gtgatggagc agaaggagat ggcttaacat tcaacaaggc tagggggaag 3300 gatctgacac tgtgcgcctc acaaaggaga aaagaaagcg agaaaaatgt gagcacagta 3360 ggcgagtcac aagggttgag cgcgaataga gtgaacatcc tcttggataa ggactggagc 3420 ctggtgaatg aggaaacggt gatcgtagct ttcaccagag cgagaaagga aatcaatgtc 3480 atagggaatt caagactcat ctcgaatttg aagaggagtg caaaaagtac tatcctcagg 3540 aaaatattgg gtggtgaaag agtgcctgaa agtctgatac tgaatctcat caggcgaaaa 3600 ctacctgagt gtgacttggt caagaaagaa atgctgctgg gggcgtcgga tgatatggag 3660 gaaaaactgg gtggtgaccc gtatctaaaa ggcctgttat gccttataga tgagattgag 3720 gaggaggagg ttgaaatacc tgagcctgag ttactggaac cacaaagaac tcacttacca 3780 cttagcgtgg gagagaatga gttatgcgtt agtgatctca gggcaaaaga gtacagagag 3840 gccagtactg aggctggtag aactgatcag attgatgaat ttggttacaa gggtgaacca 3900 gaaaacccga tgaatcacaa ggcactttat ttgtatcatc agaactctga tgtggccacg 3960 ttctttcttt ctgtgaggaa aagattgcgc ttcagggatg ccgagaagaa ccgacgcaaa 4020 tttaacaaat gtcgcgggtt cggggctcaa atgttcgggg taatgaaaca ggtgtacaat 4080 ctgaaacaac ctgatcactt accctcatta gagagagcgg agcaagaatt catgaagaaa 4140 agaattgcaa agtcttccaa attgatcgaa aagcatagtt acaggagtga acctgattgg 4200 cctagtaact atctcaagat cttcctgaag caacaaagat gcacaaagat ggagaagagg 4260 aaagtggatg caaaagctgg gcaaaccata gcttgtttct gccatgctgt tctatgccgt 4320 ttcgggcctt tgcttcgcca gactgagaag gcattaaggg atcaactggg tcctaatgtg 4380 atgatttatt cacagaagaa ctacactgat ctagacaaat ggtgcaagaa ttttgtccga 4440 accttggacg gaaccgactc agattacggg gctttcgata gaagtcagga tgaaaagata 4500 ttggacttcg aggtaaacgt gctccggttc tttttatggc ctgaagagat gatagaggaa 4560 tacgtcactc ttaagctcat gatgggttgt agcatgggtg gcctagctgt catgcggttc 4620 agtggagagt tcggtacgtt cttcttcaat accatttgca atatggggtt tacttgtttg 4680 aagtacagca taaggtcaga tacaccaata tgctatgccg gtgatgatat gtacgcccct 4740 ggtgttctgg tgaccaaatc tgagttcaag cacatattgg aagaattgca actgaaagcg 4800 aaggtcaact acacaaggag cccactcttt tgcggctggc gcatgagccc ttatggcatt 4860 gtgaaggacc caaatttact cctagatcgt tggaaaatag ctgagagaga tggcagcctc 4920 aaaaattgca tggtgaacta cgctctggag gcaatctatg ggtacaggtt aggtgagcac 4980 ctctttgatc tcaatataga catagatgct caacaagatc tcattagaag gatagtgctc 5040 ataaaacatc agctaccgaa gagtctccag aggttctact cagacgaaga aagggaatgt 5100 tattcagatg gtgaagaatt caatctgaaa gtgaggaacg aaggaggtct agatgagtcg 5160 gagttcacag aggattgaat cggagggatt aagacagttc ttgaggcagg tagaagggtt 5220 tagtttagat gttaatttat taggtgagga gtatagtaag ctaggtgtgt tcgaagctca 5280 gcagtatagg attttaagtc tcctttgtag gattaataaa gtgagtgtgt cattcatagt 5340 gagctgtttg atcaagaggg agtgtgccgt tgaagattac cgggaaggga caatttgctt 5400 acgtttggaa gaggtgattg agcgactcgt cagtggctcg ttaccgtctg tcttcacaat 5460 tcgtaaagat ttcgagaagg ggtccgttgc tttcaattac ccttggtatt actctgtaac 5520 ccgcgaacca ggctcaaggg cgcagtacaa ttaccgcaat tatgtcccag gtttcaagga 5580 gcgagtcgca acgttaccct gggtggctct cggcttcaaa gcaagtgcag caaacaaccc 5640 ggcaaacccc ggaacccact catacacaat tgagtgtgtt cgacaagcct aaagaggagc 5700 taggggtgag aggagtgaag agtgctataa cgaaagctaa agtttatgac ttgagttatt 5760 ttgagaagct ctttccaacc agggtgttca agagcgtggt gcatgaggag atcaggatca 5820 gggatgggga agtgaaacag gtgatcaact tgatggacga taatttcgtg aagaagattg 5880 agacgacttc ctacccttat cttcatatgg gttgtctggc tatatgcgtt atacctcatg 5940 gaagggattt gaaaggtgat gtcgagttca ctctcaggga tacaagattc ttgccaaata 6000 gcgagcccct catgtcattc ggttgcaaag cagagaaaat gctgagtgct tttagtgcat 6060 tccctgggta cttcgtgagc acatatgatc tgattgatgg ttttaccatg gagctggagg 6120 tgaaagctag agggatggaa tttgaggaag gggtgcgacc aatgtcaata cagatcatct 6180 gcgttgctaa attgtgcaca caagatttcc accatcaata tgcgttgcaa aaagtcaaga 6240 aaggggcata tcaggcgttg ctcaactcct acttggtgca agttgaggat cagacagagc 6300 atctagagat tcaaaatccg ggtaaatctc ttaacaggat cggttatacc ggtgtccacg 6360 ttaagtctgg agaatctgag tcaatagata agttgttggt gccaccagag gtgtatgaga 6420 caataagcaa gcaattccca gatagcaatg gaaaatatat cccggatggc caagataagg 6480 gcgaatatct ccgagcttct gtgcgcgggg gtcacgttcg tcactgatgc acgcgaaacc 6540 gggtttgatc gttccatgta tttcaggacc ttgttcgggt acatagcatt gacaggaaca 6600 tcagccaaag ctcaacacta tgaaaatgta gatataatag gtgataaagt aggtgcagag 6660 ggtctagata gtagagggac tgtcaatatt tcggagcagg tgaaaaagat gatgggttac 6720 tctcgagctg taccatctgg ggtatgcaag ggtcttactt taaggcaaat gtgcgagcct 6780 ttcgctgagg aagctaggga gtgtttaact atcctagcta cactgcgagt gtacagcagg 6840 cttgcactca aaatgaccaa gcttggccag aaagaacccc aggtgatgtt cgactttaac 6900 tcaggtttga atctactcac gttgtcggca actgaagcag ctgcaataca atctctgaac 6960 tccaggctct ttcgaactga gggtgcaaag aacgtattca cagcacaggc cagcgtgggt 7020 gagcaatctg tcgaaatata ggtggttaac tcatagatat agaggtgtag gggtcagtag 7080 acatgtctaa gtatatgggt gagtctagaa gtgcggctaa acggagggct acccgttatg 7140 gccgttgtta ctgttgtggt agattagagt gtaatggtgg gcgtaggaca accatttcac 7200 aagacgaggt gaaggcgtgc ataaggaccc cggcgattag gttcctaacc gaaaacggtg 7260 gtcgatacgt aactaacgcc attagtctcg ctctcagtga tatggatagg gttgggaagt 7320 ctgagtacca atcattgttc aaggttaata gtgcgccaat aggtatgcgt agccctgaag 7380 aaaccccaga gttctacaat tggggggccg atttcaacgc tggctcaagc gtgtttgctg 7440 atagaccata cgaatagtct atccctgatt ccaatactag gtcaagtatg ttcgcttacg 7500 gaccgtacta atagtccgtc aataattcta gggtagaatt caaataatcc caccgctagc 7560 gacttaatgc taatggtgaa agaggcgtga ataaacacg 7599 //