ID   GU733452; SV 1; linear; genomic RNA; STD; VRL; 765 BP.
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AC   GU733452;
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DT   20-SEP-2010 (Rel. 106, Created)
DT   20-SEP-2010 (Rel. 106, Last updated, Version 1)
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DE   Rotavirus D chicken/05V0049/DEU/2005 segment 10, complete sequence.
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KW   .
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OS   Rotavirus D chicken/05V0049/DEU/2005
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus.
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RN   [1]
RP   1-765
RX   DOI; 10.1128/JVI.00332-10.
RX   PUBMED; 20631147.
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   "The genome segments of a group D rotavirus possess group A-like conserved
RT   termini but encode group-specific proteins";
RL   J. Virol. 84(19):10254-10265(2010).
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RN   [2]
RP   1-765
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   ;
RL   Submitted (09-FEB-2010) to the INSDC.
RL   Food Hygiene and Safety Concepts, Federal Institute for Risk Assessment,
RL   Diederdorfer Weg 1, Berlin 12277, Germany
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DR   MD5; ac2255d98619c3ad67ca0ef3ae081efa.
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CC   GenBank Accession Numbers GU733443-GU733453 represent the complete
CC   genome of Rotavirus D strain 05V0049.
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FH   Key             Location/Qualifiers
FH
FT   source          1..765
FT                   /organism="Rotavirus D chicken/05V0049/DEU/2005"
FT                   /segment="10"
FT                   /host="chicken"
FT                   /strain="05V0049"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:884200"
FT   CDS             33..416
FT                   /codon_start=1
FT                   /product="NSP4"
FT                   /db_xref="UniProtKB/TrEMBL:E2EBU8"
FT                   /protein_id="ADN06432.1"
FT                   /translation="MLSLESLGNINVTEVIAGLNINEIGTQQIWTITVTALLSIISLIK
FT                   AKAYKILPLLCTFFVTTVKQTIILINDKILRIFGIDVSITDTQVIESHFAYIRDDLNKI
FT                   RLEIQSLKTIKKLNETIEQNVSG"
FT   CDS             385..666
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF2"
FT                   /db_xref="UniProtKB/TrEMBL:E2EBU9"
FT                   /protein_id="ADN06433.1"
FT                   /translation="MKQSSKMYQVEIDQIAKHNDAVILTSGNMSFNVLPDETYTLSRIK
FT                   LLVVNSAVLFVKLIRQSSSGLYNDVVVKDISYNNSNSLTMYVCSPAER"
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SQ   Sequence 765 BP; 269 A; 128 C; 136 G; 232 T; 0 other;
     ggttttaaaa tttattagtt gaatccatcg agatgttgtc actggaaagc ctggggaaca        60
     ttaacgttac ggaggttatc gctggtttga acatcaatga aataggtaca caacagattt       120
     ggacaattac agttacggcc ctactgtcta tcatttcact tatcaaagct aaagcctata       180
     aaatactgcc actgttgtgt acgtttttcg taactacagt aaagcaaaca attattctga       240
     taaacgacaa gattctgcgt atttttggaa tagacgtatc aataactgat actcaagtaa       300
     ttgaatcaca tttcgcttat atacgtgacg atctaaataa aattcgacta gaaattcaat       360
     ctcttaaaac tataaaaaag ttgaatgaaa caatcgagca aaatgtatca ggttgaaata       420
     gatcaaattg caaaacataa cgatgcagta atattaacta gtggtaatat gagttttaac       480
     gtactgcctg atgaaactta caccttaagc agaatcaagc tattagtagt aaattcggca       540
     gtcttatttg ttaaattaat tagacaatca agttcagggt tatataatga tgttgtagtt       600
     aaggatatat catataataa ttcaaactct ttaacaatgt acgtatgctc ccccgctgaa       660
     aggtgaccgc ctgtagaagc cagcaggtgt aaaagtctcg aggaccctat cacagctctg       720
     aactgtatat gtttacctgt gcgtggaaac taataaattg tgacc                       765
//