ID   GU733450; SV 1; linear; genomic RNA; STD; VRL; 1026 BP.
XX
AC   GU733450;
XX
DT   20-SEP-2010 (Rel. 106, Created)
DT   20-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Rotavirus D chicken/05V0049/DEU/2005 segment 8, complete sequence.
XX
KW   .
XX
OS   Rotavirus D chicken/05V0049/DEU/2005
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus.
XX
RN   [1]
RP   1-1026
RX   DOI; 10.1128/JVI.00332-10.
RX   PUBMED; 20631147.
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   "The genome segments of a group D rotavirus possess group A-like conserved
RT   termini but encode group-specific proteins";
RL   J. Virol. 84(19):10254-10265(2010).
XX
RN   [2]
RP   1-1026
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   ;
RL   Submitted (09-FEB-2010) to the INSDC.
RL   Food Hygiene and Safety Concepts, Federal Institute for Risk Assessment,
RL   Diederdorfer Weg 1, Berlin 12277, Germany
XX
DR   MD5; ba4d5c4edcdff3166eab3b1464f4a5c6.
XX
CC   GenBank Accession Numbers GU733443-GU733453 represent the complete
CC   genome of Rotavirus D strain 05V0049.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1026
FT                   /organism="Rotavirus D chicken/05V0049/DEU/2005"
FT                   /segment="8"
FT                   /host="chicken"
FT                   /strain="05V0049"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:884200"
FT   CDS             50..982
FT                   /codon_start=1
FT                   /product="NSP2"
FT                   /db_xref="GOA:E2EBU6"
FT                   /db_xref="InterPro:IPR003668"
FT                   /db_xref="InterPro:IPR024068"
FT                   /db_xref="InterPro:IPR024076"
FT                   /db_xref="UniProtKB/TrEMBL:E2EBU6"
FT                   /protein_id="ADN06430.1"
FT                   /translation="MAELGCFVNVVESDSTFTFIPIKSKAINILLTTKNDDDNPIDTII
FT                   YGLTPVPKYKRRFASDMSPSGINYDNELFDKVAIKLAEILNFGVKKMSVQQAMMMLTRV
FT                   FSVRHLESLYYRMMDEDDIIHDNIDLQFKSVMVMLKLTKSFELTLTAEGGKLLYVDKTY
FT                   ALWELDYRKYKLMPVKAVEYKITLNSATEDADSERKMAAYVKYHYNRFAVISHGFGHYR
FT                   LVPYQQVLNHAERTFATYNAIKKTKSDHSFVRLSKTLLNTNWQDFMNAVEYGKSMSECR
FT                   NELFKSSKTSNPVKKHVNILQLDEMSTVN"
XX
SQ   Sequence 1026 BP; 362 A; 152 C; 202 G; 310 T; 0 other;
     ggtttttaaa agtttacagg ccgtcggagg tttgcagtta ctccttgcaa tggcggagct        60
     gggctgcttc gtaaatgtgg ttgaatctga ttcgacgttt acattcattc caataaaatc       120
     aaaagctatt aatatattgc tcacaacgaa aaatgatgat gacaatccaa ttgatactat       180
     tatttatggt ctaacgccgg tcccaaagta taaaagaaga tttgcatctg acatgagtcc       240
     atcaggtatt aattatgata atgaattatt cgataaagtt gctattaaat tagcggagat       300
     tctgaatttt ggggttaaaa aaatgtcagt acagcaagca atgatgatgc taacaagagt       360
     gttttcagtt agacatctgg aatcattgta ctatagaatg atggacgaag atgatataat       420
     tcatgataat attgatctac aattcaaatc agttatggtg atgctgaagt taaccaaatc       480
     gttcgaattg actctaactg ctgaaggggg gaaattactt tatgttgata aaacttatgc       540
     actttgggaa ctagactata gaaagtataa actgatgcct gttaaagctg ttgaatataa       600
     aataacttta aattccgcaa cagaagatgc ggatagtgaa aggaaaatgg ctgcatatgt       660
     taaataccat tataatagat ttgctgtaat atcacatgga tttggtcatt atagactagt       720
     tccctatcag caggtactaa atcatgctga acgtactttt gcgacatata atgcaatcaa       780
     aaagacgaaa tctgatcact catttgtgcg actttctaaa actttgttga atacaaattg       840
     gcaagatttt atgaatgctg ttgaatatgg aaaaagcatg agtgaatgta ggaatgaatt       900
     atttaagtca tcaaaaacga gtaatccagt caagaagcac gtcaatatac tgcaactgga       960
     tgaaatgtcc actgtgaatt agatcggcca cgaggcaacg ccaaaaaata aacttttaat      1020
     gtgacc                                                                 1026
//