ID   GU733449; SV 1; linear; genomic RNA; STD; VRL; 1242 BP.
XX
AC   GU733449;
XX
DT   20-SEP-2010 (Rel. 106, Created)
DT   20-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Rotavirus D chicken/05V0049/DEU/2005 segment 7, complete sequence.
XX
KW   .
XX
OS   Rotavirus D chicken/05V0049/DEU/2005
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus.
XX
RN   [1]
RP   1-1242
RX   DOI; 10.1128/JVI.00332-10.
RX   PUBMED; 20631147.
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   "The genome segments of a group D rotavirus possess group A-like conserved
RT   termini but encode group-specific proteins";
RL   J. Virol. 84(19):10254-10265(2010).
XX
RN   [2]
RP   1-1242
RA   Trojnar E., Otto P., Roth B., Reetz J., Johne R.;
RT   ;
RL   Submitted (09-FEB-2010) to the INSDC.
RL   Food Hygiene and Safety Concepts, Federal Institute for Risk Assessment,
RL   Diederdorfer Weg 1, Berlin 12277, Germany
XX
DR   MD5; ea0bbb6eb465df4be14e05de21ae3569.
DR   EuropePMC; PMC3103379; 21489987.
XX
CC   GenBank Accession Numbers GU733443-GU733453 represent the complete
CC   genome of Rotavirus D strain 05V0049.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1242
FT                   /organism="Rotavirus D chicken/05V0049/DEU/2005"
FT                   /segment="7"
FT                   /host="chicken"
FT                   /strain="05V0049"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:884200"
FT   CDS             43..1155
FT                   /codon_start=1
FT                   /product="NSP3"
FT                   /db_xref="GOA:E2EBU5"
FT                   /db_xref="InterPro:IPR002873"
FT                   /db_xref="InterPro:IPR036082"
FT                   /db_xref="InterPro:IPR042519"
FT                   /db_xref="UniProtKB/TrEMBL:E2EBU5"
FT                   /protein_id="ADN06429.1"
FT                   /translation="MVQPRKVVNILCFVLLIFDTSAFPLQERKNNNQKIIYKTVLYLKK
FT                   RQNIESSYYLFDASNYEKVDQDYLCFGNDTVIHEIEIRQKDIFSYRNSELREIKTSQLC
FT                   QYDFKFKDGNSGISGSNLEALMFHGAICGRKILRGQGFTPDVKSLHDDIAMKFESMLEE
FT                   SGVKNSVFGRAKTVDEAINGKFFSAQKNRRYMTTIETVKNLESDLYRMRMMLENMDIKR
FT                   DARVLSSLFQIEKKTGKSGSVILADASVYDKLEKGEIVRVDMGKIESENSCKLRQIIDQ
FT                   KDELISKLKNEITILRATRFDDVDGLKFGFRYQSKNRDISAELSDAASQTDTLSTIKED
FT                   TVSELEERVENLEKIIAGLASRCGLTVEYV"
XX
SQ   Sequence 1242 BP; 465 A; 178 C; 265 G; 334 T; 0 other;
     ggttttaaaa ttcagaccgt tagctaaaga ctgtcggcct gaatggtgca acccaggaag        60
     gtagttaaca ttctatgctt tgtacttctg attttcgata ctagtgcatt tccattacaa       120
     gagagaaaaa acaataatca gaaaattata tataaaacag tgctgtatct taaaaagaga       180
     cagaatattg aatcatctta ctatttattt gacgcttcaa actacgaaaa agtagatcaa       240
     gattatttat gttttggtaa cgataccgtc attcatgaaa tagaaattag acaaaaagat       300
     atttttagtt ataggaattc tgaattaagg gaaatcaaaa catcacaact gtgtcagtac       360
     gatttcaaat tcaaagatgg caactcaggc atcagtggat ctaatcttga agctctcatg       420
     ttccacggcg caatttgtgg cagaaaaata ttgcgaggac aaggctttac cccagatgtc       480
     aaaagtttgc atgatgacat tgcaatgaag tttgagtcaa tgctggaaga gtctggagtt       540
     aaaaattcgg tatttggtag agctaaaaca gtagatgaag cgattaatgg aaaattcttt       600
     tctgcgcaaa agaataggcg gtatatgact accattgaaa cagtgaagaa tcttgaatca       660
     gatttgtata gaatgagaat gatgctagag aacatggaca taaaacgaga cgctagagtg       720
     ttaagttcat tatttcaaat tgagaagaaa acaggcaaat caggatcagt gattctagct       780
     gatgccagtg tatacgataa attggagaaa ggtgaaattg tgcgagtcga catgggaaag       840
     atagagagtg aaaattcatg caaattgagg caaataatcg accaaaagga tgagttaatc       900
     tctaaactta agaatgaaat caccattctg agagcaacaa ggtttgatga tgttgatgga       960
     ttaaaatttg gatttagata tcaatcaaaa aatagagaca tatcagccga actaagtgat      1020
     gcagcatcac aaactgatac gttgagtaca ataaaggaag ataccgtaag tgaacttgaa      1080
     gaaagagtag aaaatttaga aaaaataatt gcaggattgg cttctagatg tggattgaca      1140
     gtcgaatacg tataaattag agtacaagca tggaatgttc tatcgccctt aaccggatac      1200
     actgggttaa agctggcatt gcaaacaggg caccatgcga cc                         1242
//