ID GU723748; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC GU723748; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Tomato yellow leaf curl Thailand virus isolate H5-5 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Thailand virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT "Molecular diversity and pathogenicity of tomato-infecting begomoviruses in RT Taiwan"; RL Unpublished. XX RN [2] RP 1-2745 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT ; RL Submitted (08-FEB-2010) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; 72b2fe2175859593e5acfc1db21f24db. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Tomato yellow leaf curl Thailand virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="H5-5" FT /mol_type="genomic DNA" FT /country="Taiwan:Jian, Hualian" FT /collection_date="2007" FT /db_xref="taxon:85752" FT CDS 88..474 FT /codon_start=1 FT /product="V2 protein" FT /db_xref="GOA:A5JH98" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5JH98" FT /protein_id="ADE09279.1" FT /translation="MVPYLRLSHQVSAKFKMWDPLLNEFPENVHGFRCMLAVKYLQAVE FT KTYSPDTLGFDLIRDLIGVIRAKNYVEASSRYSHFHARLESTSPSELRQPIQQPCCCPH FT CPRHKRADMEEPTCIQKAQVLQNV" FT CDS 296..1066 FT /codon_start=1 FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:Q6R4D4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6R4D4" FT /protein_id="ADE09276.1" FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK FT NRPAYRKPRFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1063..1467) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:D5KYY0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KYY0" FT /protein_id="ADE09278.1" FT /translation="MDLRTGELLTAPQLESGVYIWTVKNPLYFKITKHLQSPFQRNHDI FT ITLQIQFNHNLRKALGIHKCFLVCKIWTHLHPQTSRFLTVFKYQCIKYLDRLGVISINN FT VIRAMSHVLYNVLEGTIDVIEEHDIKFNIY" FT CDS complement(1208..1612) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:D5KYY1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KYY1" FT /protein_id="ADE09277.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKRATRRRRVDLPCGCSYFVAIG FT CHNNGFTHRGTTHCTSIREWRVYLDGQKSPIFQDNQAPTEPIPEEPRHNHVTNPVQPQP FT EESVGDTQMFSSLQNLDSFTSSDLAFLNSI" FT CDS complement(1515..2600) FT /codon_start=1 FT /product="C1 protein" FT /note="replication-associated protein" FT /db_xref="GOA:D2KF18" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2KF18" FT /protein_id="ADE09275.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALTILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEEYISPFSSSSFNQVPEELKEWACNNVLSAAARPLRPIGIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNNVWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIRNAIFVTLKSPL FT YSGSNQGATPNSQEGNQTTES" FT CDS complement(2150..2449) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5JH97" FT /protein_id="ADE09280.1" FT /translation="MKMGLLTCMSSSNSKENSNVKIKDSSISHPQPGQHISIRTFRELK FT AQQMLKHTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSLY" XX SQ Sequence 2745 BP; 731 A; 538 C; 607 G; 869 T; 0 other; accggatggc cgcttttttt ttttgaagtg gtccccttga tgtgattttt catccaatta 60 aaacgctcgg ccaaagctta attatttatg gtcccctatt taagacttag tcaccaagtt 120 tcggcgaaat tcaaaatgtg ggatccactc ctaaacgaat ttccggaaaa cgtccacggt 180 ttccgttgta tgttagcggt taagtatctg caagcggtcg agaagacgta ttcacctgat 240 accctagggt ttgatctcat ccgtgatctc atcggtgtaa ttcgtgcgaa gaactatgtc 300 gaagcgtcca gcagatattc tcatttccac gcccgtctcg aaagtacgtc gccgtctgaa 360 cttcgacagc ccatacaaca gccgtgctgc tgtccccact gtccgcgtca caaaagggca 420 gatatggaag aaccgacctg catacagaaa gcccaggttc tacagaatgt atagaagtcc 480 tgatgtccct aagggatgtg agggtccatg taaagtgcaa tctttcgatg cgaagaacga 540 cattggtcat atgggcaagg taatctgtct gtctgacgtt acccgtggta ttgggcttac 600 tcatcgagtt ggcaagcgtt tctgtgtcaa gtcactttat tttgtcggga agatctggat 660 ggatgaaaat attaaggtta agaatcacac taataccgtt ttattttgga tagttaggga 720 tcggcgtcct actggaacgc ctaatgattt tcagcaggtc tttaatgtat atgataatga 780 acccagcact gctactgtaa agaacgacca gcgtgatcgt ttccaggtta taaggaggtt 840 tcaggcaacg gtgactggtg gacaatatgc agctaaggag caggcgatta ttagaaagtt 900 ttatcgtgtt aataattatg tagtttacaa tcaccaggaa gctgggaagt acgagaacca 960 tactgaaaat gctttgttgt tgtatatggc atgtactcat gcctctaatc ctgtgtatgc 1020 tactttgaaa gtcagaagtt atttctatga ctcagtgacg aattaataaa tattaaattt 1080 tatatcgtgt tcttcaatta catcaattgt tccttctaat acattgtaca gtacatgaga 1140 cattgcccta attacattat ttatactaat cacgcctaat ctatctaaat atttaataca 1200 ttgatattta aatactgtta agaaacgcga ggtctgagga tgtaaatgag tccagatttt 1260 gcagactaga aaacatttgt gtatccccaa cgctttcctc aggttgtggt tgaactggat 1320 ttgtaacgtg attatgtcgt ggttcctctg gaatgggctc tgtaggtgct tggttatctt 1380 gaaatatagg ggatttttga ccgtccagat atacacgcca ctctctaatt gaggtgcagt 1440 gagtagttcc ccggtgcgta aatccattat tgtgacatcc tattgcgacg aagtacgaac 1500 atccacaagg tagatcaact ctccgtcgtc tggttgccct cttggctatt cggtgttgca 1560 ccttgattgg aacctgagta gagtgggctt ttgagggtga cgaagatcgc atttcttata 1620 gcccagtttc taagtgcgga gttcttttct tcttccaagt actctttata actggagttg 1680 ggtccaggat tgcagagaaa gatagtggga attccgcctt taatttgaac tggctttccg 1740 tactttgtgt ttgattgcca gtccctttgg gcccccatga attctttaaa gtgttttaga 1800 tagtgcggat cgacgtcatc gatgacgttg taccacacat tattattgta cacttttgga 1860 cttaaatcta aatggccaca cagataatta tgtggtccca atgacctagc ccacatcgtc 1920 ttccccgttc tgctatcacc ctcaattact ataccaatgg gtctcaatgg ccgcgcagcg 1980 gcactgagaa cattattaca agcccattct ttaagttctt ctggaacttg attaaaagaa 2040 gaagaagaaa atggagaaat atattcctcc attggaggag taaaaatcct atctaaatta 2100 gaatttaaat tatgaaattg caaaacaaaa tctttagggg ctttttccct cagtatagtg 2160 agggccgaag ctttggaccc tgaattgatt gcctcggcat atgcgtcgtt ggcagattgg 2220 caacctcctc tagccgatct tccatcgatc tggaaaattc catgatcaag cacgtctccg 2280 tctttttcca tgtatgtttt aacatctgtt gagcttttag ctccctgaat gttcggatgg 2340 aaatgtgctg acctggttgg ggatgtgaga tcgaagaatc tttgattttt acattggaat 2400 tttccttcga attggatgag gacatgcagg tgaggagtcc catcttcatg gagttccctg 2460 cagattctga tgaataattt attagttggt gtttctagtg cttgaatttg ggaaagtgct 2520 tcctctttag tgagagaaca atgtgggtat gtcaggaaat agttcttggc atttattctg 2580 aatttattag gaggagccat tgactggtca atcggtgtct ctcaaacttg gctatgcaat 2640 cggtgtctgg ggtcttattt atacctggac accaaatggc ataattgtaa tttagtgaat 2700 gtgatgtaaa attcaaaatc caaaagcggc catctgtata atatt 2745 //