ID GU723739; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC GU723739; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Tomato yellow leaf curl Thailand virus isolate J2-6 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato yellow leaf curl Thailand virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT "Molecular diversity and pathogenicity of tomato-infecting begomoviruses in RT Taiwan"; RL Unpublished. XX RN [2] RP 1-2743 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT ; RL Submitted (08-FEB-2010) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; ff5a93c9594abf7e6a148ea9991e6ec7. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Tomato yellow leaf curl Thailand virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="J2-6" FT /mol_type="genomic DNA" FT /country="Taiwan:Singang, Chiayi" FT /collection_date="2007" FT /db_xref="taxon:85752" FT CDS 86..472 FT /codon_start=1 FT /product="V2 protein" FT /db_xref="GOA:D5KYS4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D5KYS4" FT /protein_id="ADE09225.1" FT /translation="MFPYLRLSHQVSAKFKMWDPLLNEFPENVHGFRCMLAVKYLQAVE FT KTYSPDTLGFDLIRDLIGVIRAKNYVEASSRYSHFHARLESTSPSELRQPIQQPCCCPH FT CPRHKRADMEEPTCIQKAQVLQNV" FT CDS 294..1064 FT /codon_start=1 FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:Q6R4D4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6R4D4" FT /protein_id="ADE09222.1" FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK FT NRPAYRKPRFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1061..1465) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:D5KYS6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KYS6" FT /protein_id="ADE09224.1" FT /translation="MDLRTGEILTATQLESGVYIWMVKNPLYFKITKHLESPFQRNHDI FT ITLQIQFNHNLRKALGIHKCFLVCKIWTHLHPQTSRFLTVFKYQCIKYLDRLGVISINN FT VIRAMSHVLYNVLEGTIDVIEEHDIKFNIY" FT CDS complement(1206..1610) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:D5KYS7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KYS7" FT /protein_id="ADE09223.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKRVTRRRRVDLPCGCSYFVAIG FT CHNNGFTHRGNTHCNSIREWRVYLDGQKSPIFQDNQAPREPIPEEPRHNHVTNPVQPQP FT EESVGDTQMFSSLQNLDSFTSSDLAFLNSI" FT CDS complement(1513..2598) FT /codon_start=1 FT /product="C1 protein" FT /note="replication-associated protein" FT /db_xref="GOA:D5KYS8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D5KYS8" FT /protein_id="ADE09221.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIQALETPTNKLFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALTILREKAPKDFVLQFH FT NLNSNLDRIFTPPIEEYISPFSSSSFNQVPQELKEWACNNVLSAAARPLRPIGIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNNVWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIRNAIFVTLKSPL FT YSGSNQGATPNSQEGNQTTES" FT CDS complement(2148..2447) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5JH97" FT /protein_id="ADE09226.1" FT /translation="MKMGLLTCMSSSNSKENSNVKIKDSSISHPQPGQHISIRTFRELK FT AQQMLKHTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSLY" XX SQ Sequence 2743 BP; 734 A; 538 C; 603 G; 868 T; 0 other; accggatggc cgcgattttt ttgaagtggt ccccttgatg tgatgtttca tccaattaaa 60 acgctcggcc aaagcttaat tatttatgtt cccctattta agacttagtc accaagtttc 120 ggcgaaattc aaaatgtggg atccactcct aaacgaattt ccggaaaacg tccacggttt 180 ccgttgtatg ttagcggtta agtatctgca agcggtcgag aagacgtatt cacctgatac 240 cctagggttt gatctcatcc gtgatctcat cggtgtaatt cgtgcgaaga actatgtcga 300 agcgtccagc agatattctc atttccacgc ccgtctcgaa agtacgtcgc cgtctgaact 360 tcgacagccc atacaacagc cgtgctgctg tccccactgt ccgcgtcaca aaagggcaga 420 tatggaagaa ccgacctgca tacagaaagc ccaggttcta cagaatgtat agaagtcctg 480 atgtccctaa gggatgtgag ggtccatgta aagtgcaatc tttcgatgcg aagaacgaca 540 ttggtcatat gggcaaggta atctgtctgt ctgacgttac ccgtggtatt gggcttactc 600 atcgagttgg caagcgtttc tgtgtcaagt cactttattt tgtcgggaag atctggatgg 660 atgaaaatat taaggttaag aatcacacta ataccgtttt attttggata gttagggatc 720 ggcgtcctac tggaacgcct aatgattttc agcaggtctt taatgtatat gataatgaac 780 ccagcactgc tactgtaaag aacgaccagc gtgatcgttt ccaggttata aggaggtttc 840 aggcaacggt gactggtgga caatatgcag ctaaggagca ggcgattatt agaaagtttt 900 atcgtgttaa taattatgta gtttacaatc accaggaagc tgggaagtac gagaaccata 960 ctgaaaatgc tttgttgttg tatatggcat gtactcatgc ctctaatcct gtgtatgcta 1020 ctttgaaagt cagaagttat ttctatgact cagtgacgaa ttaataaata ttaaatttta 1080 tatcgtgttc ttcaattaca tcaattgttc cttctaatac attgtacagt acatgagaca 1140 ttgccctaat tacattattt atactaatca cgcctaatct atctaaatat ttaatacatt 1200 gatatttaaa tactgttaag aaacgcgagg tctgaggatg taaatgagtc cagattttgc 1260 agactagaaa acatttgtgt atccccaacg ctttcctcag gttgtggttg aactggattt 1320 gtaacgtgat tatgtcgtgg ttcctctgga atgggctctc taggtgcttg gttatcttga 1380 aatatagggg atttttgacc atccagatat acacgccact ctctaattga gttgcagtga 1440 gtatttcccc ggtgcgtaaa tccattattg tgacatccta ttgcgacgaa gtacgaacat 1500 ccacaaggta gatcaactct ccgtcgtctg gttaccctct tggctattcg gtgttgcacc 1560 ttgattggaa cctgagtaga gtgggctttt gagggtgacg aagatcgcat ttcttatagc 1620 ccagtttcta agtgcggagt tcttttcttc ttccaagtac tctttataac tggagttggg 1680 tccaggattg cagagaaaga tagtgggaat tccgccttta atttgaactg gctttccgta 1740 ctttgtgttt gattgccagt ccctttgggc ccccatgaat tctttaaagt gttttagata 1800 gtgcggatcg acgtcatcga tgacgttgta ccacacatta ttattgtaca cttttggact 1860 taaatctaaa tggccacaca gataattatg tggtcccaat gacctagccc acatcgtctt 1920 ccccgttctg ctatcaccct caattactat accaatgggt ctcaatggcc gcgcagcggc 1980 actgagaaca ttattacaag cccattcttt aagttcttgt ggaacttgat taaaagaaga 2040 agaagaaaat ggagaaatat attcctctat tggaggagta aaaatcctat ctaaattaga 2100 atttaaatta tgaaattgca aaacaaaatc tttaggggct ttttccctca gtatagtgag 2160 ggccgaagct ttggaccctg aattgattgc ctcggcatat gcgtcgttgg cagattggca 2220 acctcctcta gccgatcttc catcgatctg gaaaattcca tgatcaagca cgtctccgtc 2280 tttttccatg tatgttttaa catctgttga gcttttagct ccctgaatgt tcggatggaa 2340 atgtgctgac ctggttgggg atgtgagatc gaagaatctt tgatttttac attggaattt 2400 tccttcgaat tggatgagga catgcaggtg aggagtccca tcttcatgga gttccctgca 2460 gattctgatg aataatttat tagttggtgt ttctagtgct tgaatttggg aaagtgcttc 2520 ctctttagtg agagaacaat gtgggtatgt caggaaatag ttcttggcat ttattctgaa 2580 tttattagga ggagccattg actggtcaat cggtgtctct caaacttggc tatgcaatcg 2640 gtgtctgggg tcttatttat acctggacac caaatggcat aattgtaatt tagtgaatgt 2700 gatttaaaat tcaaaatcca aaagcggcca tccgtataat att 2743 //