ID GU723726; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC GU723726; XX DT 01-APR-2010 (Rel. 104, Created) DT 01-APR-2010 (Rel. 104, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate H4-2 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT "Molecular diversity and pathogenicity of tomato-infecting begomoviruses in RT Taiwan"; RL Unpublished. XX RN [2] RP 1-2740 RA Tsai W.S., Shih S.L., Green S.K., Kenyon L., Jan F.-J.; RT ; RL Submitted (08-FEB-2010) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; 991032de3ae8edeefe4d6eb59507f519. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="H4-2" FT /mol_type="genomic DNA" FT /country="Taiwan:Jian, Hualian" FT /collection_date="2007" FT /db_xref="taxon:196093" FT CDS 132..473 FT /codon_start=1 FT /product="V2 protein" FT /db_xref="GOA:Q09M50" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q09M50" FT /protein_id="ADE09137.1" FT /translation="MWDPLLNDFPETVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHTRFQGSSPSELRQPVWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT CDS 292..1065 FT /codon_start=1 FT /product="V1 protein" FT /note="coat protein" FT /db_xref="GOA:D5KYJ7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D5KYJ7" FT /protein_id="ADE09134.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRAAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDIAHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1062..1466) FT /codon_start=1 FT /product="C3 protein" FT /db_xref="GOA:D5KYJ8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D5KYJ8" FT /protein_id="ADE09136.1" FT /translation="MDSHTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPQTSHFLRVFKYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVIEGTVDAQFSHIIKFKIY" FT CDS complement(1207..1614) FT /codon_start=1 FT /product="C2 protein" FT /db_xref="GOA:D5KY91" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D5KY91" FT /protein_id="ADE09135.1" FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQSETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT CDS complement(1514..2602) FT /codon_start=1 FT /product="C1 protein" FT /note="replication-associated protein" FT /db_xref="GOA:D5KYK0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D5KYK0" FT /protein_id="ADE09133.1" FT /translation="MPPLNKFRINAKNYFLTYPHCSLSKEEALSQIQALQTPTNKLFIR FT VCRELHEDGTPHLHILIQFEGKFQCKNNKFFDLTSPTRSAHFHPNTQGAKSSTDVKTYM FT EKDGDVLDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH FT NLNNNLDRIFAPPLEVYISPFNSSSFDQVPIELVEWVTENVRDSAARPWRPMSIVLEGE FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL FT YSRANQGPTQNSEKETNSQAEG" FT CDS complement(2152..2445) FT /codon_start=1 FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D5KYK1" FT /protein_id="ADE09138.1" FT /translation="MELLTCIFSSNLKENSNVRITSSSTSHPQPGQHISIRTLRELRAQ FT QMSKPIWKKTETCLIMEFSRSMEDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2740 BP; 720 A; 532 C; 608 G; 880 T; 0 other; accggatggc cgcggggttt tttagtgggt cctacgcact aatgtttgtt gtccaataga 60 aacgctccct caaagcttat ttataaaaat acccgttata aatacttggt ggctaagtta 120 caatcgttaa aatgtgggat ccacttttaa acgatttccc ggaaactgtc catggtctac 180 ggtgtatgct tgctattaag tatttacatc tcgtagaaaa tacatattct ccggatactt 240 tgggttacga tctcatacgt gatttgattt tagttatccg tgctagagat tatgtcgaag 300 cgtcccgccg atatagtcat ttccacaccc gcttccaagg ttcgtcgccg tctgaacttc 360 gccagcccgt atggcaaccg tgcagctgcc cccactgtcc tcgtcacaaa caaaaagagt 420 tcatgggtga atcggccctt gttcagaaag cccaagatgt acaggatgta taaaagccca 480 gatgttcctc gtggttgtga aggtccatgt aaggtacagt catttgaaca gcgtcatgat 540 atagcccatg tgggtaaggt aatctgtgtg tccgatgtca cacgaggtaa tgggttgacc 600 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa gatatggatg 660 gatgagaata tcaagacgaa gaatcacaca aatactgtga tgttcttctt agtccgtgat 720 agaaggcctt atggtactcc acaagatttc ggtcagatct ttaatatgta tgataatgag 780 cctagcactg caacggtgaa gaatgataat agagataggt ttcaagttct ccgacgattc 840 caggctacgg tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 900 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata cgataaccat 960 acagagaatg ctttgttgtt gtatatggca tgtactcatg ccagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaaa attaataaat tttaaatttt 1080 attatatgtg aaaactgagc atcgactgtg ccctctatta cattgtatag tacatgtctc 1140 attgctctga atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1200 tggtacttaa ataccctcaa gaaatgcgag gtctgaggtt gtaaacgagt ccaaatctgg 1260 caaattataa aacactggtg tattcccaac gctttcctca ggttgtagtt gaattgaact 1320 tgtattgtcg ttacgtcgtg gttccgtaga aatggtctct gattgtgttg tgttattttg 1380 aaatagaggg gattgttgat tgtccaggta tacacgccat tctctgcttg agctgcagtg 1440 atgagttccc ctgtgtgaga atccatgtga tgcgcagtta attccaagat aataagagca 1500 cccacaagga agatcaaccc tccgcctgcg aattggtctc tttttcgcta ttttgtgttg 1560 gaccttgatt ggcacgtgag tagagtggct cggtgagggt gatgaattcc gcattcttta 1620 aagcccagtc tttgagtgcg aaattctttt cttcgtctaa gtactcttta tatgatgatg 1680 ttggccctgg attgcaaagg aagattgttg ggataccacc tttaatttga attggtttcc 1740 cgtatttggt gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1800 gatagtgggg atcgacgtca tcaatgacgt tgtaccatgc ctcattgttg tagactcttg 1860 ggcttagatc aagatgccca cacaagtaat tgtgtgggcc tagagacctc gcccaaagtg 1920 tcttccctgt acgactctct ccctctaaca caatactcat gggtctccat ggccgcgcag 1980 cggaatccct cacgttctcg gtaacccatt ctacaagttc tattggaact tgatcaaatg 2040 aagaagaatt aaaaggagaa atataaacct ccaatggagg tgcaaaaatc ctatctaaat 2100 tattatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc cttaatatat 2160 tgagggcctc agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt 2220 ggcaacctcc tctagctgat cttccatcga cctggaaaat tccatgatca agcacgtctc 2280 cgtctttttc catataggtt ttgacatctg ttgagctctt agctccctga gtgttcggat 2340 ggaaatgtgc tgacctggtt ggggatgtga ggtcgaagaa cttgttattc ttacattgga 2400 attttccttc aaattggatg agaatatgca ggtgaggagt tccatcttcg tgaagttccc 2460 tgcaaaccct gatgaatagt ttatttgttg gggtctgtag agcttgtatt tgggaaagtg 2520 cctcctcttt gcttagggag cagtgtggat atgtgaggaa gtagttcttt gcatttattc 2580 tgaatttatt aagtggaggc atgttgactt ggtcaatcgg tgtctctcaa acttctctat 2640 gtatcggtgt attggggtct tatttatact tggacactaa atggcattta tgtaatttct 2700 taaaattatt aatgtgtaaa gcggccatcc gtttaatatt 2740 //